Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01903:01914
Extra
PDB:
ATOM 1 O3' G A1902 105.656 110.095 89.706 1.00 54.05 O
ATOM 2 P G A1903 106.083 110.204 91.246 1.00 56.45 P
ATOM 3 OP1 G A1903 104.865 109.874 92.041 1.00 56.65 O
ATOM 4 OP2 G A1903 106.786 111.500 91.482 1.00 56.48 O
ATOM 5 O5' G A1903 107.135 109.020 91.409 1.00 55.22 O
ATOM 6 C5' G A1903 106.722 107.653 91.243 1.00 54.73 C
ATOM 7 C4' G A1903 107.812 106.718 91.695 1.00 54.75 C
ATOM 8 O4' G A1903 108.927 106.793 90.774 1.00 53.75 O
ATOM 9 C3' G A1903 108.416 107.031 93.053 1.00 55.10 C
ATOM 10 O3' G A1903 107.635 106.495 94.110 1.00 58.02 O
ATOM 11 C2' G A1903 109.778 106.369 92.948 1.00 54.37 C
ATOM 12 O2' G A1903 109.696 104.971 93.120 1.00 53.70 O
ATOM 13 C1' G A1903 110.141 106.684 91.496 1.00 54.52 C
ATOM 14 N9 G A1903 110.851 107.952 91.369 1.00 54.94 N
ATOM 15 C8 G A1903 110.319 109.167 91.007 1.00 54.63 C
ATOM 16 N7 G A1903 111.199 110.128 90.999 1.00 55.21 N
ATOM 17 C5 G A1903 112.385 109.511 91.380 1.00 55.65 C
ATOM 18 C6 G A1903 113.682 110.047 91.558 1.00 55.73 C
ATOM 19 O6 G A1903 114.059 111.210 91.413 1.00 58.02 O
ATOM 20 N1 G A1903 114.588 109.073 91.947 1.00 54.71 N
ATOM 21 C2 G A1903 114.292 107.755 92.138 1.00 54.42 C
ATOM 22 N2 G A1903 115.312 106.978 92.510 1.00 56.08 N
ATOM 23 N3 G A1903 113.089 107.237 91.979 1.00 53.98 N
ATOM 24 C4 G A1903 112.188 108.168 91.603 1.00 55.01 C
ATOM 25 P C A1904 107.652 107.202 95.548 1.00 61.01 P
ATOM 26 OP1 C A1904 106.798 106.388 96.440 1.00 62.74 O
ATOM 27 OP2 C A1904 107.356 108.650 95.372 1.00 60.73 O
ATOM 28 O5' C A1904 109.159 107.040 96.040 1.00 64.06 O
TER
ATOM 1 O3' U B1913 112.527 95.943 89.093 1.00 87.94 O
ATOM 2 P A B1914 114.073 95.506 89.094 1.00 83.85 P
ATOM 3 OP1 A B1914 114.349 94.861 87.781 1.00 83.47 O
ATOM 4 OP2 A B1914 114.333 94.760 90.358 1.00 83.75 O
ATOM 5 O5' A B1914 114.870 96.885 89.161 1.00 79.65 O
ATOM 6 C5' A B1914 116.167 97.024 88.544 1.00 73.12 C
ATOM 7 C4' A B1914 116.669 98.441 88.690 1.00 68.21 C
ATOM 8 O4' A B1914 115.721 99.346 88.075 1.00 66.55 O
ATOM 9 C3' A B1914 116.803 98.944 90.115 1.00 65.94 C
ATOM 10 O3' A B1914 118.060 98.552 90.648 1.00 66.41 O
ATOM 11 C2' A B1914 116.686 100.453 89.947 1.00 64.39 C
ATOM 12 O2' A B1914 117.885 101.065 89.511 1.00 61.76 O
ATOM 13 C1' A B1914 115.654 100.548 88.821 1.00 64.67 C
ATOM 14 N9 A B1914 114.268 100.740 89.252 1.00 63.25 N
ATOM 15 C8 A B1914 113.284 99.794 89.372 1.00 62.20 C
ATOM 16 N7 A B1914 112.126 100.278 89.744 1.00 62.15 N
ATOM 17 C5 A B1914 112.366 101.636 89.887 1.00 63.36 C
ATOM 18 C6 A B1914 111.539 102.709 90.260 1.00 64.10 C
ATOM 19 N6 A B1914 110.238 102.583 90.540 1.00 65.19 N
ATOM 20 N1 A B1914 112.097 103.937 90.327 1.00 63.64 N
ATOM 21 C2 A B1914 113.388 104.069 90.022 1.00 62.68 C
ATOM 22 N3 A B1914 114.262 103.144 89.646 1.00 62.76 N
ATOM 23 C4 A B1914 113.683 101.933 89.599 1.00 62.95 C
ATOM 24 P A B1915 118.183 98.138 92.196 1.00 66.99 P
ATOM 25 OP1 A B1915 119.475 97.412 92.338 1.00 66.40 O
ATOM 26 OP2 A B1915 116.914 97.476 92.614 1.00 66.15 O
ATOM 27 O5' A B1915 118.304 99.530 92.965 1.00 65.20 O
TER
ATOM 2 P G A1903 106.083 110.204 91.246 1.00 56.45 P
ATOM 3 OP1 G A1903 104.865 109.874 92.041 1.00 56.65 O
ATOM 4 OP2 G A1903 106.786 111.500 91.482 1.00 56.48 O
ATOM 5 O5' G A1903 107.135 109.020 91.409 1.00 55.22 O
ATOM 6 C5' G A1903 106.722 107.653 91.243 1.00 54.73 C
ATOM 7 C4' G A1903 107.812 106.718 91.695 1.00 54.75 C
ATOM 8 O4' G A1903 108.927 106.793 90.774 1.00 53.75 O
ATOM 9 C3' G A1903 108.416 107.031 93.053 1.00 55.10 C
ATOM 10 O3' G A1903 107.635 106.495 94.110 1.00 58.02 O
ATOM 11 C2' G A1903 109.778 106.369 92.948 1.00 54.37 C
ATOM 12 O2' G A1903 109.696 104.971 93.120 1.00 53.70 O
ATOM 13 C1' G A1903 110.141 106.684 91.496 1.00 54.52 C
ATOM 14 N9 G A1903 110.851 107.952 91.369 1.00 54.94 N
ATOM 15 C8 G A1903 110.319 109.167 91.007 1.00 54.63 C
ATOM 16 N7 G A1903 111.199 110.128 90.999 1.00 55.21 N
ATOM 17 C5 G A1903 112.385 109.511 91.380 1.00 55.65 C
ATOM 18 C6 G A1903 113.682 110.047 91.558 1.00 55.73 C
ATOM 19 O6 G A1903 114.059 111.210 91.413 1.00 58.02 O
ATOM 20 N1 G A1903 114.588 109.073 91.947 1.00 54.71 N
ATOM 21 C2 G A1903 114.292 107.755 92.138 1.00 54.42 C
ATOM 22 N2 G A1903 115.312 106.978 92.510 1.00 56.08 N
ATOM 23 N3 G A1903 113.089 107.237 91.979 1.00 53.98 N
ATOM 24 C4 G A1903 112.188 108.168 91.603 1.00 55.01 C
ATOM 25 P C A1904 107.652 107.202 95.548 1.00 61.01 P
ATOM 26 OP1 C A1904 106.798 106.388 96.440 1.00 62.74 O
ATOM 27 OP2 C A1904 107.356 108.650 95.372 1.00 60.73 O
ATOM 28 O5' C A1904 109.159 107.040 96.040 1.00 64.06 O
TER
ATOM 1 O3' U B1913 112.527 95.943 89.093 1.00 87.94 O
ATOM 2 P A B1914 114.073 95.506 89.094 1.00 83.85 P
ATOM 3 OP1 A B1914 114.349 94.861 87.781 1.00 83.47 O
ATOM 4 OP2 A B1914 114.333 94.760 90.358 1.00 83.75 O
ATOM 5 O5' A B1914 114.870 96.885 89.161 1.00 79.65 O
ATOM 6 C5' A B1914 116.167 97.024 88.544 1.00 73.12 C
ATOM 7 C4' A B1914 116.669 98.441 88.690 1.00 68.21 C
ATOM 8 O4' A B1914 115.721 99.346 88.075 1.00 66.55 O
ATOM 9 C3' A B1914 116.803 98.944 90.115 1.00 65.94 C
ATOM 10 O3' A B1914 118.060 98.552 90.648 1.00 66.41 O
ATOM 11 C2' A B1914 116.686 100.453 89.947 1.00 64.39 C
ATOM 12 O2' A B1914 117.885 101.065 89.511 1.00 61.76 O
ATOM 13 C1' A B1914 115.654 100.548 88.821 1.00 64.67 C
ATOM 14 N9 A B1914 114.268 100.740 89.252 1.00 63.25 N
ATOM 15 C8 A B1914 113.284 99.794 89.372 1.00 62.20 C
ATOM 16 N7 A B1914 112.126 100.278 89.744 1.00 62.15 N
ATOM 17 C5 A B1914 112.366 101.636 89.887 1.00 63.36 C
ATOM 18 C6 A B1914 111.539 102.709 90.260 1.00 64.10 C
ATOM 19 N6 A B1914 110.238 102.583 90.540 1.00 65.19 N
ATOM 20 N1 A B1914 112.097 103.937 90.327 1.00 63.64 N
ATOM 21 C2 A B1914 113.388 104.069 90.022 1.00 62.68 C
ATOM 22 N3 A B1914 114.262 103.144 89.646 1.00 62.76 N
ATOM 23 C4 A B1914 113.683 101.933 89.599 1.00 62.95 C
ATOM 24 P A B1915 118.183 98.138 92.196 1.00 66.99 P
ATOM 25 OP1 A B1915 119.475 97.412 92.338 1.00 66.40 O
ATOM 26 OP2 A B1915 116.914 97.476 92.614 1.00 66.15 O
ATOM 27 O5' A B1915 118.304 99.530 92.965 1.00 65.20 O
TER
Atoms:
OP1: (104.865,109.874,92.041)
OP2: (106.786,111.500,91.482)
C3': (108.416,107.031,93.053)
C1': (110.141,106.684,91.496)
C5': (106.722,107.653,91.243)
O6: (114.059,111.210,91.413)
O4': (108.927,106.793,90.774)
C8: (110.319,109.167,91.007)
C2: (114.292,107.755,92.138)
C6: (113.682,110.047,91.558)
C5: (112.385,109.511,91.380)
C4: (112.188,108.168,91.603)
P: (106.083,110.204,91.246)
C4': (107.812,106.718,91.695)
C2': (109.778,106.369,92.948)
O2': (109.696,104.971,93.120)
N1: (114.588,109.073,91.947)
N2: (115.312,106.978,92.510)
N3: (113.089,107.237,91.979)
N7: (111.199,110.128,90.999)
N9: (110.851,107.952,91.369)
O5': (107.135,109.020,91.409)
O3': (107.635,106.495,94.110)
OP2: (106.786,111.500,91.482)
C3': (108.416,107.031,93.053)
C1': (110.141,106.684,91.496)
C5': (106.722,107.653,91.243)
O6: (114.059,111.210,91.413)
O4': (108.927,106.793,90.774)
C8: (110.319,109.167,91.007)
C2: (114.292,107.755,92.138)
C6: (113.682,110.047,91.558)
C5: (112.385,109.511,91.380)
C4: (112.188,108.168,91.603)
P: (106.083,110.204,91.246)
C4': (107.812,106.718,91.695)
C2': (109.778,106.369,92.948)
O2': (109.696,104.971,93.120)
N1: (114.588,109.073,91.947)
N2: (115.312,106.978,92.510)
N3: (113.089,107.237,91.979)
N7: (111.199,110.128,90.999)
N9: (110.851,107.952,91.369)
O5': (107.135,109.020,91.409)
O3': (107.635,106.495,94.110)
OP1: (114.349,94.861,87.781)
OP2: (114.333,94.760,90.358)
C3': (116.803,98.944,90.115)
C1': (115.654,100.548,88.821)
C5': (116.167,97.024,88.544)
O4': (115.721,99.346,88.075)
C8: (113.284,99.794,89.372)
O2': (117.885,101.065,89.511)
C6: (111.539,102.709,90.260)
C5: (112.366,101.636,89.887)
C4: (113.683,101.933,89.599)
P: (114.073,95.506,89.094)
C4': (116.669,98.441,88.690)
C2': (116.686,100.453,89.947)
C2: (113.388,104.069,90.022)
N1: (112.097,103.937,90.327)
N3: (114.262,103.144,89.646)
N6: (110.238,102.583,90.540)
N7: (112.126,100.278,89.744)
N9: (114.268,100.740,89.252)
O5': (114.870,96.885,89.161)
O3': (118.060,98.552,90.648)
OP2: (114.333,94.760,90.358)
C3': (116.803,98.944,90.115)
C1': (115.654,100.548,88.821)
C5': (116.167,97.024,88.544)
O4': (115.721,99.346,88.075)
C8: (113.284,99.794,89.372)
O2': (117.885,101.065,89.511)
C6: (111.539,102.709,90.260)
C5: (112.366,101.636,89.887)
C4: (113.683,101.933,89.599)
P: (114.073,95.506,89.094)
C4': (116.669,98.441,88.690)
C2': (116.686,100.453,89.947)
C2: (113.388,104.069,90.022)
N1: (112.097,103.937,90.327)
N3: (114.262,103.144,89.646)
N6: (110.238,102.583,90.540)
N7: (112.126,100.278,89.744)
N9: (114.268,100.740,89.252)
O5': (114.870,96.885,89.161)
O3': (118.060,98.552,90.648)
Image (generated by PyMOL):