Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01034:01056
Extra
PDB:
ATOM 1 O3' G A1033 23.543 105.710 100.806 1.00 40.13 O
ATOM 2 P G A1034 24.141 106.203 102.218 1.00 42.15 P
ATOM 3 OP1 G A1034 23.354 107.379 102.687 1.00 37.42 O
ATOM 4 OP2 G A1034 25.620 106.316 102.078 1.00 42.42 O
ATOM 5 O5' G A1034 23.879 104.975 103.197 1.00 42.21 O
ATOM 6 C5' G A1034 22.554 104.622 103.619 1.00 43.31 C
ATOM 7 C4' G A1034 22.610 103.551 104.686 1.00 44.52 C
ATOM 8 O4' G A1034 23.117 102.312 104.123 1.00 44.91 O
ATOM 9 C3' G A1034 23.536 103.802 105.863 1.00 43.88 C
ATOM 10 O3' G A1034 22.976 104.658 106.836 1.00 45.10 O
ATOM 11 C2' G A1034 23.704 102.402 106.414 1.00 44.68 C
ATOM 12 O2' G A1034 22.538 102.001 107.107 1.00 44.11 O
ATOM 13 C1' G A1034 23.837 101.599 105.119 1.00 45.64 C
ATOM 14 N9 G A1034 25.228 101.466 104.684 1.00 46.96 N
ATOM 15 C8 G A1034 25.830 102.105 103.629 1.00 48.12 C
ATOM 16 N7 G A1034 27.089 101.793 103.488 1.00 49.08 N
ATOM 17 C5 G A1034 27.337 100.890 104.510 1.00 49.12 C
ATOM 18 C6 G A1034 28.529 100.202 104.859 1.00 49.49 C
ATOM 19 O6 G A1034 29.637 100.253 104.317 1.00 50.29 O
ATOM 20 N1 G A1034 28.338 99.383 105.961 1.00 49.54 N
ATOM 21 C2 G A1034 27.157 99.234 106.638 1.00 50.51 C
ATOM 22 N2 G A1034 27.173 98.374 107.661 1.00 52.67 N
ATOM 23 N3 G A1034 26.041 99.872 106.330 1.00 50.00 N
ATOM 24 C4 G A1034 26.201 100.676 105.259 1.00 48.61 C
ATOM 25 P G A1035 23.922 105.696 107.603 1.00 46.99 P
ATOM 26 OP1 G A1035 23.041 106.508 108.475 1.00 47.35 O
ATOM 27 OP2 G A1035 24.758 106.365 106.588 1.00 48.24 O
ATOM 28 O5' G A1035 24.873 104.781 108.502 1.00 47.38 O
TER
ATOM 1 O3' U B1055 15.767 92.450 111.043 1.00 41.89 O
ATOM 2 P A B1056 17.165 92.681 111.774 1.00 40.99 P
ATOM 3 OP1 A B1056 17.501 91.474 112.568 1.00 40.82 O
ATOM 4 OP2 A B1056 17.065 94.000 112.444 1.00 39.84 O
ATOM 5 O5' A B1056 18.200 92.805 110.570 1.00 41.67 O
ATOM 6 C5' A B1056 18.667 91.647 109.846 1.00 40.51 C
ATOM 7 C4' A B1056 19.925 91.994 109.077 1.00 40.58 C
ATOM 8 O4' A B1056 19.608 92.961 108.047 1.00 39.97 O
ATOM 9 C3' A B1056 21.025 92.660 109.894 1.00 40.49 C
ATOM 10 O3' A B1056 21.830 91.679 110.545 1.00 40.00 O
ATOM 11 C2' A B1056 21.814 93.426 108.838 1.00 41.21 C
ATOM 12 O2' A B1056 22.753 92.632 108.147 1.00 41.54 O
ATOM 13 C1' A B1056 20.710 93.830 107.858 1.00 41.46 C
ATOM 14 N9 A B1056 20.258 95.217 107.974 1.00 42.51 N
ATOM 15 C8 A B1056 19.106 95.716 108.540 1.00 42.81 C
ATOM 16 N7 A B1056 18.998 97.021 108.456 1.00 42.09 N
ATOM 17 C5 A B1056 20.156 97.408 107.795 1.00 42.60 C
ATOM 18 C6 A B1056 20.640 98.662 107.393 1.00 41.72 C
ATOM 19 N6 A B1056 19.991 99.806 107.595 1.00 41.69 N
ATOM 20 N1 A B1056 21.832 98.699 106.761 1.00 42.31 N
ATOM 21 C2 A B1056 22.480 97.550 106.545 1.00 41.86 C
ATOM 22 N3 A B1056 22.128 96.313 106.866 1.00 40.50 N
ATOM 23 C4 A B1056 20.943 96.309 107.498 1.00 42.34 C
ATOM 24 P A B1057 22.378 91.943 112.028 1.00 39.18 P
ATOM 25 OP1 A B1057 22.954 90.664 112.499 1.00 38.71 O
ATOM 26 OP2 A B1057 21.322 92.605 112.827 1.00 39.11 O
ATOM 27 O5' A B1057 23.558 92.981 111.804 1.00 38.05 O
TER
ATOM 2 P G A1034 24.141 106.203 102.218 1.00 42.15 P
ATOM 3 OP1 G A1034 23.354 107.379 102.687 1.00 37.42 O
ATOM 4 OP2 G A1034 25.620 106.316 102.078 1.00 42.42 O
ATOM 5 O5' G A1034 23.879 104.975 103.197 1.00 42.21 O
ATOM 6 C5' G A1034 22.554 104.622 103.619 1.00 43.31 C
ATOM 7 C4' G A1034 22.610 103.551 104.686 1.00 44.52 C
ATOM 8 O4' G A1034 23.117 102.312 104.123 1.00 44.91 O
ATOM 9 C3' G A1034 23.536 103.802 105.863 1.00 43.88 C
ATOM 10 O3' G A1034 22.976 104.658 106.836 1.00 45.10 O
ATOM 11 C2' G A1034 23.704 102.402 106.414 1.00 44.68 C
ATOM 12 O2' G A1034 22.538 102.001 107.107 1.00 44.11 O
ATOM 13 C1' G A1034 23.837 101.599 105.119 1.00 45.64 C
ATOM 14 N9 G A1034 25.228 101.466 104.684 1.00 46.96 N
ATOM 15 C8 G A1034 25.830 102.105 103.629 1.00 48.12 C
ATOM 16 N7 G A1034 27.089 101.793 103.488 1.00 49.08 N
ATOM 17 C5 G A1034 27.337 100.890 104.510 1.00 49.12 C
ATOM 18 C6 G A1034 28.529 100.202 104.859 1.00 49.49 C
ATOM 19 O6 G A1034 29.637 100.253 104.317 1.00 50.29 O
ATOM 20 N1 G A1034 28.338 99.383 105.961 1.00 49.54 N
ATOM 21 C2 G A1034 27.157 99.234 106.638 1.00 50.51 C
ATOM 22 N2 G A1034 27.173 98.374 107.661 1.00 52.67 N
ATOM 23 N3 G A1034 26.041 99.872 106.330 1.00 50.00 N
ATOM 24 C4 G A1034 26.201 100.676 105.259 1.00 48.61 C
ATOM 25 P G A1035 23.922 105.696 107.603 1.00 46.99 P
ATOM 26 OP1 G A1035 23.041 106.508 108.475 1.00 47.35 O
ATOM 27 OP2 G A1035 24.758 106.365 106.588 1.00 48.24 O
ATOM 28 O5' G A1035 24.873 104.781 108.502 1.00 47.38 O
TER
ATOM 1 O3' U B1055 15.767 92.450 111.043 1.00 41.89 O
ATOM 2 P A B1056 17.165 92.681 111.774 1.00 40.99 P
ATOM 3 OP1 A B1056 17.501 91.474 112.568 1.00 40.82 O
ATOM 4 OP2 A B1056 17.065 94.000 112.444 1.00 39.84 O
ATOM 5 O5' A B1056 18.200 92.805 110.570 1.00 41.67 O
ATOM 6 C5' A B1056 18.667 91.647 109.846 1.00 40.51 C
ATOM 7 C4' A B1056 19.925 91.994 109.077 1.00 40.58 C
ATOM 8 O4' A B1056 19.608 92.961 108.047 1.00 39.97 O
ATOM 9 C3' A B1056 21.025 92.660 109.894 1.00 40.49 C
ATOM 10 O3' A B1056 21.830 91.679 110.545 1.00 40.00 O
ATOM 11 C2' A B1056 21.814 93.426 108.838 1.00 41.21 C
ATOM 12 O2' A B1056 22.753 92.632 108.147 1.00 41.54 O
ATOM 13 C1' A B1056 20.710 93.830 107.858 1.00 41.46 C
ATOM 14 N9 A B1056 20.258 95.217 107.974 1.00 42.51 N
ATOM 15 C8 A B1056 19.106 95.716 108.540 1.00 42.81 C
ATOM 16 N7 A B1056 18.998 97.021 108.456 1.00 42.09 N
ATOM 17 C5 A B1056 20.156 97.408 107.795 1.00 42.60 C
ATOM 18 C6 A B1056 20.640 98.662 107.393 1.00 41.72 C
ATOM 19 N6 A B1056 19.991 99.806 107.595 1.00 41.69 N
ATOM 20 N1 A B1056 21.832 98.699 106.761 1.00 42.31 N
ATOM 21 C2 A B1056 22.480 97.550 106.545 1.00 41.86 C
ATOM 22 N3 A B1056 22.128 96.313 106.866 1.00 40.50 N
ATOM 23 C4 A B1056 20.943 96.309 107.498 1.00 42.34 C
ATOM 24 P A B1057 22.378 91.943 112.028 1.00 39.18 P
ATOM 25 OP1 A B1057 22.954 90.664 112.499 1.00 38.71 O
ATOM 26 OP2 A B1057 21.322 92.605 112.827 1.00 39.11 O
ATOM 27 O5' A B1057 23.558 92.981 111.804 1.00 38.05 O
TER
Atoms:
OP1: (23.354,107.379,102.687)
OP2: (25.620,106.316,102.078)
C3': (23.536,103.802,105.863)
C1': (23.837,101.599,105.119)
C5': (22.554,104.622,103.619)
O6: (29.637,100.253,104.317)
O4': (23.117,102.312,104.123)
C8: (25.830,102.105,103.629)
C2: (27.157,99.234,106.638)
C6: (28.529,100.202,104.859)
C5: (27.337,100.890,104.510)
C4: (26.201,100.676,105.259)
P: (24.141,106.203,102.218)
C4': (22.610,103.551,104.686)
C2': (23.704,102.402,106.414)
O2': (22.538,102.001,107.107)
N1: (28.338,99.383,105.961)
N2: (27.173,98.374,107.661)
N3: (26.041,99.872,106.330)
N7: (27.089,101.793,103.488)
N9: (25.228,101.466,104.684)
O5': (23.879,104.975,103.197)
O3': (22.976,104.658,106.836)
OP2: (25.620,106.316,102.078)
C3': (23.536,103.802,105.863)
C1': (23.837,101.599,105.119)
C5': (22.554,104.622,103.619)
O6: (29.637,100.253,104.317)
O4': (23.117,102.312,104.123)
C8: (25.830,102.105,103.629)
C2: (27.157,99.234,106.638)
C6: (28.529,100.202,104.859)
C5: (27.337,100.890,104.510)
C4: (26.201,100.676,105.259)
P: (24.141,106.203,102.218)
C4': (22.610,103.551,104.686)
C2': (23.704,102.402,106.414)
O2': (22.538,102.001,107.107)
N1: (28.338,99.383,105.961)
N2: (27.173,98.374,107.661)
N3: (26.041,99.872,106.330)
N7: (27.089,101.793,103.488)
N9: (25.228,101.466,104.684)
O5': (23.879,104.975,103.197)
O3': (22.976,104.658,106.836)
OP1: (17.501,91.474,112.568)
OP2: (17.065,94.000,112.444)
C3': (21.025,92.660,109.894)
C1': (20.710,93.830,107.858)
C5': (18.667,91.647,109.846)
O4': (19.608,92.961,108.047)
C8: (19.106,95.716,108.540)
O2': (22.753,92.632,108.147)
C6: (20.640,98.662,107.393)
C5: (20.156,97.408,107.795)
C4: (20.943,96.309,107.498)
P: (17.165,92.681,111.774)
C4': (19.925,91.994,109.077)
C2': (21.814,93.426,108.838)
C2: (22.480,97.550,106.545)
N1: (21.832,98.699,106.761)
N3: (22.128,96.313,106.866)
N6: (19.991,99.806,107.595)
N7: (18.998,97.021,108.456)
N9: (20.258,95.217,107.974)
O5': (18.200,92.805,110.570)
O3': (21.830,91.679,110.545)
OP2: (17.065,94.000,112.444)
C3': (21.025,92.660,109.894)
C1': (20.710,93.830,107.858)
C5': (18.667,91.647,109.846)
O4': (19.608,92.961,108.047)
C8: (19.106,95.716,108.540)
O2': (22.753,92.632,108.147)
C6: (20.640,98.662,107.393)
C5: (20.156,97.408,107.795)
C4: (20.943,96.309,107.498)
P: (17.165,92.681,111.774)
C4': (19.925,91.994,109.077)
C2': (21.814,93.426,108.838)
C2: (22.480,97.550,106.545)
N1: (21.832,98.699,106.761)
N3: (22.128,96.313,106.866)
N6: (19.991,99.806,107.595)
N7: (18.998,97.021,108.456)
N9: (20.258,95.217,107.974)
O5': (18.200,92.805,110.570)
O3': (21.830,91.679,110.545)
Image (generated by PyMOL):