ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A222:A252

Extra

PDB:
ATOM 1 O3' G A 221 11.139 48.286 103.812 1.00 39.11 O
ATOM 2 P G A 222 11.296 49.889 103.630 1.00 21.67 P
ATOM 3 OP1 G A 222 10.234 50.484 104.488 1.00 13.71 O
ATOM 4 OP2 G A 222 11.375 50.266 102.189 1.00 9.27 O
ATOM 5 O5' G A 222 12.715 50.205 104.274 1.00 32.17 O
ATOM 6 C5' G A 222 12.926 50.059 105.684 1.00 29.71 C
ATOM 7 C4' G A 222 14.212 50.728 106.074 1.00 29.10 C
ATOM 8 O4' G A 222 15.328 49.974 105.556 1.00 29.54 O
ATOM 9 C3' G A 222 14.388 52.116 105.493 1.00 29.00 C
ATOM 10 O3' G A 222 13.761 53.085 106.313 1.00 30.68 O
ATOM 11 C2' G A 222 15.897 52.279 105.453 1.00 28.66 C
ATOM 12 O2' G A 222 16.415 52.676 106.703 1.00 26.81 O
ATOM 13 C1' G A 222 16.352 50.856 105.147 1.00 28.61 C
ATOM 14 N9 G A 222 16.572 50.630 103.731 1.00 10.08 N
ATOM 15 C8 G A 222 15.754 49.939 102.879 1.00 11.55 C
ATOM 16 N7 G A 222 16.219 49.875 101.661 1.00 13.74 N
ATOM 17 C5 G A 222 17.404 50.579 101.714 1.00 12.43 C
ATOM 18 C6 G A 222 18.319 50.860 100.704 1.00 14.30 C
ATOM 19 O6 G A 222 18.265 50.535 99.517 1.00 16.57 O
ATOM 20 N1 G A 222 19.389 51.605 101.180 1.00 13.50 N
ATOM 21 C2 G A 222 19.541 52.020 102.477 1.00 11.98 C
ATOM 22 N2 G A 222 20.646 52.709 102.746 1.00 13.15 N
ATOM 23 N3 G A 222 18.675 51.772 103.436 1.00 11.89 N
ATOM 24 C4 G A 222 17.638 51.051 102.987 1.00 11.30 C
ATOM 25 P C A 223 13.276 54.464 105.664 1.00 15.72 P
ATOM 26 OP1 C A 223 12.745 55.230 106.808 1.00 27.22 O
ATOM 27 OP2 C A 223 12.390 54.199 104.505 1.00 29.49 O
ATOM 28 O5' C A 223 14.636 55.094 105.116 1.00 2.26 O
TER

ATOM 1 O3' U B 251 22.259 50.400 114.543 1.00 52.55 O
ATOM 2 P A B 252 22.979 48.959 114.563 1.00 19.59 P
ATOM 3 OP1 A B 252 21.929 47.926 114.364 1.00 43.61 O
ATOM 4 OP2 A B 252 23.865 48.889 115.758 1.00 43.76 O
ATOM 5 O5' A B 252 23.924 49.018 113.282 1.00 32.32 O
ATOM 6 C5' A B 252 24.602 47.851 112.793 1.00 30.31 C
ATOM 7 C4' A B 252 24.592 47.852 111.285 1.00 29.65 C
ATOM 8 O4' A B 252 23.317 47.385 110.790 1.00 29.47 O
ATOM 9 C3' A B 252 24.762 49.229 110.672 1.00 28.47 C
ATOM 10 O3' A B 252 26.131 49.556 110.596 1.00 27.49 O
ATOM 11 C2' A B 252 24.092 49.098 109.311 1.00 29.75 C
ATOM 12 O2' A B 252 24.950 48.574 108.313 1.00 30.02 O
ATOM 13 C1' A B 252 22.985 48.085 109.607 1.00 30.77 C
ATOM 14 N9 A B 252 21.651 48.651 109.774 1.00 41.96 N
ATOM 15 C8 A B 252 20.870 48.664 110.907 1.00 42.15 C
ATOM 16 N7 A B 252 19.678 49.178 110.719 1.00 43.32 N
ATOM 17 C5 A B 252 19.680 49.541 109.376 1.00 41.97 C
ATOM 18 C6 A B 252 18.702 50.124 108.549 1.00 40.87 C
ATOM 19 N6 A B 252 17.480 50.444 108.965 1.00 38.64 N
ATOM 20 N1 A B 252 19.029 50.366 107.262 1.00 42.96 N
ATOM 21 C2 A B 252 20.256 50.041 106.842 1.00 43.25 C
ATOM 22 N3 A B 252 21.258 49.480 107.517 1.00 43.92 N
ATOM 23 C4 A B 252 20.899 49.247 108.792 1.00 42.46 C
ATOM 24 P A B 253 26.637 50.924 111.234 1.00 8.29 P
ATOM 25 OP1 A B 253 28.110 50.838 111.421 1.00 7.58 O
ATOM 26 OP2 A B 253 25.746 51.213 112.395 1.00 9.98 O
ATOM 27 O5' A B 253 26.388 51.967 110.063 1.00 20.30 O
TER

Atoms:
OP1: (10.234,50.484,104.488)
OP2: (11.375,50.266,102.189)
C3': (14.388,52.116,105.493)
C1': (16.352,50.856,105.147)
C5': (12.926,50.059,105.684)
O6: (18.265,50.535,99.517)
O4': (15.328,49.974,105.556)
C8: (15.754,49.939,102.879)
C2: (19.541,52.020,102.477)
C6: (18.319,50.860,100.704)
C5: (17.404,50.579,101.714)
C4: (17.638,51.051,102.987)
P: (11.296,49.889,103.630)
C4': (14.212,50.728,106.074)
C2': (15.897,52.279,105.453)
O2': (16.415,52.676,106.703)
N1: (19.389,51.605,101.180)
N2: (20.646,52.709,102.746)
N3: (18.675,51.772,103.436)
N7: (16.219,49.875,101.661)
N9: (16.572,50.630,103.731)
O5': (12.715,50.205,104.274)
O3': (13.761,53.085,106.313)
OP1: (21.929,47.926,114.364)
OP2: (23.865,48.889,115.758)
C3': (24.762,49.229,110.672)
C1': (22.985,48.085,109.607)
C5': (24.602,47.851,112.793)
O4': (23.317,47.385,110.790)
C8: (20.870,48.664,110.907)
O2': (24.950,48.574,108.313)
C6: (18.702,50.124,108.549)
C5: (19.680,49.541,109.376)
C4: (20.899,49.247,108.792)
P: (22.979,48.959,114.563)
C4': (24.592,47.852,111.285)
C2': (24.092,49.098,109.311)
C2: (20.256,50.041,106.842)
N1: (19.029,50.366,107.262)
N3: (21.258,49.480,107.517)
N6: (17.480,50.444,108.965)
N7: (19.678,49.178,110.719)
N9: (21.651,48.651,109.774)
O5': (23.924,49.018,113.282)
O3': (26.131,49.556,110.596)
Image (generated by PyMOL):
PyMOL image
show in jmol