ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A930:A1197

Extra

PDB:
ATOM 1 O3' U A 929 -95.084 93.743 105.028 1.00 43.33 O
ATOM 2 P A A 930 -94.975 92.365 105.856 1.00 62.38 P
ATOM 3 OP1 A A 930 -96.248 92.208 106.623 1.00 98.63 O
ATOM 4 OP2 A A 930 -93.671 92.337 106.581 1.00 98.50 O
ATOM 5 O5' A A 930 -94.952 91.263 104.708 1.00 40.16 O
ATOM 6 C5' A A 930 -94.430 89.941 104.946 1.00 40.40 C
ATOM 7 C4' A A 930 -94.861 89.014 103.835 1.00 40.38 C
ATOM 8 O4' A A 930 -96.294 88.859 103.879 1.00 41.70 O
ATOM 9 C3' A A 930 -94.544 89.540 102.447 1.00 39.98 C
ATOM 10 O3' A A 930 -93.260 89.047 102.080 1.00 38.52 O
ATOM 11 C2' A A 930 -95.649 88.952 101.573 1.00 40.98 C
ATOM 12 O2' A A 930 -95.329 87.698 101.024 1.00 40.72 O
ATOM 13 C1' A A 930 -96.796 88.770 102.568 1.00 42.21 C
ATOM 14 N9 A A 930 -97.938 89.670 102.445 1.00 50.12 N
ATOM 15 C8 A A 930 -98.404 90.592 103.352 1.00 50.94 C
ATOM 16 N7 A A 930 -99.497 91.202 102.969 1.00 51.58 N
ATOM 17 C5 A A 930 -99.760 90.654 101.721 1.00 50.85 C
ATOM 18 C6 A A 930 -100.779 90.880 100.790 1.00 51.20 C
ATOM 19 N6 A A 930 -101.769 91.754 100.971 1.00 51.50 N
ATOM 20 N1 A A 930 -100.747 90.173 99.645 1.00 50.80 N
ATOM 21 C2 A A 930 -99.747 89.305 99.455 1.00 50.97 C
ATOM 22 N3 A A 930 -98.732 89.008 100.252 1.00 50.81 N
ATOM 23 C4 A A 930 -98.799 89.723 101.382 1.00 50.46 C
ATOM 24 P A A 931 -92.100 90.065 101.644 1.00 91.53 P
ATOM 25 OP1 A A 931 -90.804 89.365 101.857 1.00115.42 O
ATOM 26 OP2 A A 931 -92.340 91.375 102.309 1.00116.03 O
ATOM 27 O5' A A 931 -92.337 90.235 100.078 1.00 27.70 O
TER

ATOM 1 O3' G B1196 -109.185 91.238 95.631 1.00 54.08 O
ATOM 2 P G B1197 -108.260 92.311 94.866 1.00 63.47 P
ATOM 3 OP1 G B1197 -108.802 93.642 95.227 1.00 58.62 O
ATOM 4 OP2 G B1197 -108.126 91.944 93.428 1.00 57.66 O
ATOM 5 O5' G B1197 -106.829 92.133 95.547 1.00 38.29 O
ATOM 6 C5' G B1197 -106.625 92.508 96.924 1.00 38.20 C
ATOM 7 C4' G B1197 -105.165 92.388 97.312 1.00 37.74 C
ATOM 8 O4' G B1197 -104.754 91.003 97.198 1.00 37.78 O
ATOM 9 C3' G B1197 -104.157 93.161 96.473 1.00 37.32 C
ATOM 10 O3' G B1197 -103.992 94.510 96.891 1.00 36.47 O
ATOM 11 C2' G B1197 -102.880 92.373 96.702 1.00 37.43 C
ATOM 12 O2' G B1197 -102.261 92.720 97.925 1.00 37.76 O
ATOM 13 C1' G B1197 -103.410 90.939 96.759 1.00 36.86 C
ATOM 14 N9 G B1197 -103.397 90.346 95.425 1.00 31.93 N
ATOM 15 C8 G B1197 -104.464 90.215 94.573 1.00 31.01 C
ATOM 16 N7 G B1197 -104.137 89.714 93.416 1.00 30.33 N
ATOM 17 C5 G B1197 -102.773 89.488 93.513 1.00 29.29 C
ATOM 18 C6 G B1197 -101.862 88.982 92.557 1.00 28.44 C
ATOM 19 O6 G B1197 -102.089 88.625 91.395 1.00 27.62 O
ATOM 20 N1 G B1197 -100.567 88.919 93.064 1.00 27.73 N
ATOM 21 C2 G B1197 -100.199 89.294 94.327 1.00 28.36 C
ATOM 22 N2 G B1197 -98.908 89.136 94.627 1.00 28.20 N
ATOM 23 N3 G B1197 -101.038 89.781 95.227 1.00 28.48 N
ATOM 24 C4 G B1197 -102.302 89.850 94.753 1.00 29.78 C
ATOM 25 P G B1198 -103.455 95.604 95.840 1.00 39.09 P
ATOM 26 OP1 G B1198 -103.340 96.882 96.592 1.00 66.15 O
ATOM 27 OP2 G B1198 -104.303 95.544 94.624 1.00 64.50 O
ATOM 28 O5' G B1198 -102.000 95.087 95.427 1.00 34.33 O
TER

Atoms:
OP1: (-96.248,92.208,106.623)
OP2: (-93.671,92.337,106.581)
C3': (-94.544,89.540,102.447)
C1': (-96.796,88.770,102.568)
C5': (-94.430,89.941,104.946)
O4': (-96.294,88.859,103.879)
C8: (-98.404,90.592,103.352)
O2': (-95.329,87.698,101.024)
C6: (-100.779,90.880,100.790)
C5: (-99.760,90.654,101.721)
C4: (-98.799,89.723,101.382)
P: (-94.975,92.365,105.856)
C4': (-94.861,89.014,103.835)
C2': (-95.649,88.952,101.573)
C2: (-99.747,89.305,99.455)
N1: (-100.747,90.173,99.645)
N3: (-98.732,89.008,100.252)
N6: (-101.769,91.754,100.971)
N7: (-99.497,91.202,102.969)
N9: (-97.938,89.670,102.445)
O5': (-94.952,91.263,104.708)
O3': (-93.260,89.047,102.080)
OP1: (-108.802,93.642,95.227)
OP2: (-108.126,91.944,93.428)
C3': (-104.157,93.161,96.473)
C1': (-103.410,90.939,96.759)
C5': (-106.625,92.508,96.924)
O6: (-102.089,88.625,91.395)
O4': (-104.754,91.003,97.198)
C8: (-104.464,90.215,94.573)
C2: (-100.199,89.294,94.327)
C6: (-101.862,88.982,92.557)
C5: (-102.773,89.488,93.513)
C4: (-102.302,89.850,94.753)
P: (-108.260,92.311,94.866)
C4': (-105.165,92.388,97.312)
C2': (-102.880,92.373,96.702)
O2': (-102.261,92.720,97.925)
N1: (-100.567,88.919,93.064)
N2: (-98.908,89.136,94.627)
N3: (-101.038,89.781,95.227)
N7: (-104.137,89.714,93.416)
N9: (-103.397,90.346,95.425)
O5': (-106.829,92.133,95.547)
O3': (-103.992,94.510,96.891)
Image (generated by PyMOL):
PyMOL image
show in jmol