Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1820:A1843
Extra
PDB:
ATOM 1 O3' G A1819 -86.897 -16.602 19.773 1.00 16.30 O
ATOM 2 P G A1820 -87.109 -16.602 18.186 1.00 34.00 P
ATOM 3 OP1 G A1820 -87.786 -17.879 17.852 1.00 29.95 O
ATOM 4 OP2 G A1820 -85.861 -16.232 17.499 1.00 29.95 O
ATOM 5 O5' G A1820 -88.150 -15.430 17.967 1.00 7.63 O
ATOM 6 C5' G A1820 -89.376 -15.423 18.704 1.00 7.63 C
ATOM 7 C4' G A1820 -90.075 -14.100 18.545 1.00 7.63 C
ATOM 8 O4' G A1820 -89.344 -13.052 19.229 1.00 7.63 O
ATOM 9 C3' G A1820 -90.241 -13.573 17.132 1.00 7.63 C
ATOM 10 O3' G A1820 -91.347 -14.189 16.501 1.00 7.63 O
ATOM 11 C2' G A1820 -90.492 -12.098 17.389 1.00 7.63 C
ATOM 12 O2' G A1820 -91.815 -11.907 17.846 1.00 7.63 O
ATOM 13 C1' G A1820 -89.563 -11.824 18.569 1.00 7.63 C
ATOM 14 N9 G A1820 -88.279 -11.306 18.135 1.00 0.79 N
ATOM 15 C8 G A1820 -87.074 -11.953 18.162 1.00 0.79 C
ATOM 16 N7 G A1820 -86.102 -11.236 17.673 1.00 0.79 N
ATOM 17 C5 G A1820 -86.708 -10.045 17.309 1.00 0.79 C
ATOM 18 C6 G A1820 -86.165 -8.887 16.725 1.00 0.79 C
ATOM 19 O6 G A1820 -84.999 -8.681 16.371 1.00 0.79 O
ATOM 20 N1 G A1820 -87.121 -7.901 16.552 1.00 0.79 N
ATOM 21 C2 G A1820 -88.422 -8.021 16.884 1.00 0.79 C
ATOM 22 N2 G A1820 -89.171 -6.951 16.658 1.00 0.79 N
ATOM 23 N3 G A1820 -88.954 -9.105 17.408 1.00 0.79 N
ATOM 24 C4 G A1820 -88.044 -10.069 17.597 1.00 0.79 C
ATOM 25 P C A1821 -91.434 -14.200 14.903 1.00 11.44 P
ATOM 26 OP1 C A1821 -92.767 -14.761 14.558 1.00 28.39 O
ATOM 27 OP2 C A1821 -90.199 -14.810 14.341 1.00 28.39 O
ATOM 28 O5' C A1821 -91.394 -12.662 14.503 1.00 15.26 O
TER
ATOM 1 O3' U B1842 -99.545 -7.445 21.755 1.00 32.74 O
ATOM 2 P A B1843 -99.403 -6.565 23.092 1.00 41.65 P
ATOM 3 OP1 A B1843 -99.367 -7.523 24.234 1.00 63.28 O
ATOM 4 OP2 A B1843 -100.427 -5.481 23.071 1.00 63.14 O
ATOM 5 O5' A B1843 -97.960 -5.910 22.943 1.00 25.21 O
ATOM 6 C5' A B1843 -97.614 -4.689 23.634 1.00 25.21 C
ATOM 7 C4' A B1843 -96.191 -4.282 23.300 1.00 25.21 C
ATOM 8 O4' A B1843 -95.281 -5.309 23.758 1.00 25.21 O
ATOM 9 C3' A B1843 -95.902 -4.119 21.818 1.00 25.21 C
ATOM 10 O3' A B1843 -96.174 -2.778 21.446 1.00 25.21 O
ATOM 11 C2' A B1843 -94.420 -4.449 21.714 1.00 25.21 C
ATOM 12 O2' A B1843 -93.635 -3.325 22.060 1.00 25.21 O
ATOM 13 C1' A B1843 -94.258 -5.514 22.803 1.00 25.21 C
ATOM 14 N9 A B1843 -94.337 -6.917 22.377 1.00 6.28 N
ATOM 15 C8 A B1843 -95.346 -7.801 22.684 1.00 6.36 C
ATOM 16 N7 A B1843 -95.146 -9.012 22.232 1.00 6.50 N
ATOM 17 C5 A B1843 -93.936 -8.919 21.569 1.00 6.44 C
ATOM 18 C6 A B1843 -93.186 -9.859 20.873 1.00 6.41 C
ATOM 19 N6 A B1843 -93.556 -11.130 20.723 1.00 6.39 N
ATOM 20 N1 A B1843 -92.031 -9.454 20.322 1.00 6.33 N
ATOM 21 C2 A B1843 -91.672 -8.180 20.467 1.00 6.33 C
ATOM 22 N3 A B1843 -92.296 -7.196 21.099 1.00 6.36 N
ATOM 23 C4 A B1843 -93.434 -7.634 21.637 1.00 6.36 C
ATOM 24 P A B1844 -97.139 -2.481 20.206 1.00 27.03 P
ATOM 25 OP1 A B1844 -97.478 -1.044 20.294 1.00 27.47 O
ATOM 26 OP2 A B1844 -98.236 -3.493 20.161 1.00 27.39 O
ATOM 27 O5' A B1844 -96.172 -2.677 18.956 1.00 35.37 O
TER
ATOM 2 P G A1820 -87.109 -16.602 18.186 1.00 34.00 P
ATOM 3 OP1 G A1820 -87.786 -17.879 17.852 1.00 29.95 O
ATOM 4 OP2 G A1820 -85.861 -16.232 17.499 1.00 29.95 O
ATOM 5 O5' G A1820 -88.150 -15.430 17.967 1.00 7.63 O
ATOM 6 C5' G A1820 -89.376 -15.423 18.704 1.00 7.63 C
ATOM 7 C4' G A1820 -90.075 -14.100 18.545 1.00 7.63 C
ATOM 8 O4' G A1820 -89.344 -13.052 19.229 1.00 7.63 O
ATOM 9 C3' G A1820 -90.241 -13.573 17.132 1.00 7.63 C
ATOM 10 O3' G A1820 -91.347 -14.189 16.501 1.00 7.63 O
ATOM 11 C2' G A1820 -90.492 -12.098 17.389 1.00 7.63 C
ATOM 12 O2' G A1820 -91.815 -11.907 17.846 1.00 7.63 O
ATOM 13 C1' G A1820 -89.563 -11.824 18.569 1.00 7.63 C
ATOM 14 N9 G A1820 -88.279 -11.306 18.135 1.00 0.79 N
ATOM 15 C8 G A1820 -87.074 -11.953 18.162 1.00 0.79 C
ATOM 16 N7 G A1820 -86.102 -11.236 17.673 1.00 0.79 N
ATOM 17 C5 G A1820 -86.708 -10.045 17.309 1.00 0.79 C
ATOM 18 C6 G A1820 -86.165 -8.887 16.725 1.00 0.79 C
ATOM 19 O6 G A1820 -84.999 -8.681 16.371 1.00 0.79 O
ATOM 20 N1 G A1820 -87.121 -7.901 16.552 1.00 0.79 N
ATOM 21 C2 G A1820 -88.422 -8.021 16.884 1.00 0.79 C
ATOM 22 N2 G A1820 -89.171 -6.951 16.658 1.00 0.79 N
ATOM 23 N3 G A1820 -88.954 -9.105 17.408 1.00 0.79 N
ATOM 24 C4 G A1820 -88.044 -10.069 17.597 1.00 0.79 C
ATOM 25 P C A1821 -91.434 -14.200 14.903 1.00 11.44 P
ATOM 26 OP1 C A1821 -92.767 -14.761 14.558 1.00 28.39 O
ATOM 27 OP2 C A1821 -90.199 -14.810 14.341 1.00 28.39 O
ATOM 28 O5' C A1821 -91.394 -12.662 14.503 1.00 15.26 O
TER
ATOM 1 O3' U B1842 -99.545 -7.445 21.755 1.00 32.74 O
ATOM 2 P A B1843 -99.403 -6.565 23.092 1.00 41.65 P
ATOM 3 OP1 A B1843 -99.367 -7.523 24.234 1.00 63.28 O
ATOM 4 OP2 A B1843 -100.427 -5.481 23.071 1.00 63.14 O
ATOM 5 O5' A B1843 -97.960 -5.910 22.943 1.00 25.21 O
ATOM 6 C5' A B1843 -97.614 -4.689 23.634 1.00 25.21 C
ATOM 7 C4' A B1843 -96.191 -4.282 23.300 1.00 25.21 C
ATOM 8 O4' A B1843 -95.281 -5.309 23.758 1.00 25.21 O
ATOM 9 C3' A B1843 -95.902 -4.119 21.818 1.00 25.21 C
ATOM 10 O3' A B1843 -96.174 -2.778 21.446 1.00 25.21 O
ATOM 11 C2' A B1843 -94.420 -4.449 21.714 1.00 25.21 C
ATOM 12 O2' A B1843 -93.635 -3.325 22.060 1.00 25.21 O
ATOM 13 C1' A B1843 -94.258 -5.514 22.803 1.00 25.21 C
ATOM 14 N9 A B1843 -94.337 -6.917 22.377 1.00 6.28 N
ATOM 15 C8 A B1843 -95.346 -7.801 22.684 1.00 6.36 C
ATOM 16 N7 A B1843 -95.146 -9.012 22.232 1.00 6.50 N
ATOM 17 C5 A B1843 -93.936 -8.919 21.569 1.00 6.44 C
ATOM 18 C6 A B1843 -93.186 -9.859 20.873 1.00 6.41 C
ATOM 19 N6 A B1843 -93.556 -11.130 20.723 1.00 6.39 N
ATOM 20 N1 A B1843 -92.031 -9.454 20.322 1.00 6.33 N
ATOM 21 C2 A B1843 -91.672 -8.180 20.467 1.00 6.33 C
ATOM 22 N3 A B1843 -92.296 -7.196 21.099 1.00 6.36 N
ATOM 23 C4 A B1843 -93.434 -7.634 21.637 1.00 6.36 C
ATOM 24 P A B1844 -97.139 -2.481 20.206 1.00 27.03 P
ATOM 25 OP1 A B1844 -97.478 -1.044 20.294 1.00 27.47 O
ATOM 26 OP2 A B1844 -98.236 -3.493 20.161 1.00 27.39 O
ATOM 27 O5' A B1844 -96.172 -2.677 18.956 1.00 35.37 O
TER
Atoms:
OP1: (-87.786,-17.879,17.852)
OP2: (-85.861,-16.232,17.499)
C3': (-90.241,-13.573,17.132)
C1': (-89.563,-11.824,18.569)
C5': (-89.376,-15.423,18.704)
O6: (-84.999,-8.681,16.371)
O4': (-89.344,-13.052,19.229)
C8: (-87.074,-11.953,18.162)
C2: (-88.422,-8.021,16.884)
C6: (-86.165,-8.887,16.725)
C5: (-86.708,-10.045,17.309)
C4: (-88.044,-10.069,17.597)
P: (-87.109,-16.602,18.186)
C4': (-90.075,-14.100,18.545)
C2': (-90.492,-12.098,17.389)
O2': (-91.815,-11.907,17.846)
N1: (-87.121,-7.901,16.552)
N2: (-89.171,-6.951,16.658)
N3: (-88.954,-9.105,17.408)
N7: (-86.102,-11.236,17.673)
N9: (-88.279,-11.306,18.135)
O5': (-88.150,-15.430,17.967)
O3': (-91.347,-14.189,16.501)
OP2: (-85.861,-16.232,17.499)
C3': (-90.241,-13.573,17.132)
C1': (-89.563,-11.824,18.569)
C5': (-89.376,-15.423,18.704)
O6: (-84.999,-8.681,16.371)
O4': (-89.344,-13.052,19.229)
C8: (-87.074,-11.953,18.162)
C2: (-88.422,-8.021,16.884)
C6: (-86.165,-8.887,16.725)
C5: (-86.708,-10.045,17.309)
C4: (-88.044,-10.069,17.597)
P: (-87.109,-16.602,18.186)
C4': (-90.075,-14.100,18.545)
C2': (-90.492,-12.098,17.389)
O2': (-91.815,-11.907,17.846)
N1: (-87.121,-7.901,16.552)
N2: (-89.171,-6.951,16.658)
N3: (-88.954,-9.105,17.408)
N7: (-86.102,-11.236,17.673)
N9: (-88.279,-11.306,18.135)
O5': (-88.150,-15.430,17.967)
O3': (-91.347,-14.189,16.501)
OP1: (-99.367,-7.523,24.234)
OP2: (-100.427,-5.481,23.071)
C3': (-95.902,-4.119,21.818)
C1': (-94.258,-5.514,22.803)
C5': (-97.614,-4.689,23.634)
O4': (-95.281,-5.309,23.758)
C8: (-95.346,-7.801,22.684)
O2': (-93.635,-3.325,22.060)
C6: (-93.186,-9.859,20.873)
C5: (-93.936,-8.919,21.569)
C4: (-93.434,-7.634,21.637)
P: (-99.403,-6.565,23.092)
C4': (-96.191,-4.282,23.300)
C2': (-94.420,-4.449,21.714)
C2: (-91.672,-8.180,20.467)
N1: (-92.031,-9.454,20.322)
N3: (-92.296,-7.196,21.099)
N6: (-93.556,-11.130,20.723)
N7: (-95.146,-9.012,22.232)
N9: (-94.337,-6.917,22.377)
O5': (-97.960,-5.910,22.943)
O3': (-96.174,-2.778,21.446)
OP2: (-100.427,-5.481,23.071)
C3': (-95.902,-4.119,21.818)
C1': (-94.258,-5.514,22.803)
C5': (-97.614,-4.689,23.634)
O4': (-95.281,-5.309,23.758)
C8: (-95.346,-7.801,22.684)
O2': (-93.635,-3.325,22.060)
C6: (-93.186,-9.859,20.873)
C5: (-93.936,-8.919,21.569)
C4: (-93.434,-7.634,21.637)
P: (-99.403,-6.565,23.092)
C4': (-96.191,-4.282,23.300)
C2': (-94.420,-4.449,21.714)
C2: (-91.672,-8.180,20.467)
N1: (-92.031,-9.454,20.322)
N3: (-92.296,-7.196,21.099)
N6: (-93.556,-11.130,20.723)
N7: (-95.146,-9.012,22.232)
N9: (-94.337,-6.917,22.377)
O5': (-97.960,-5.910,22.943)
O3': (-96.174,-2.778,21.446)
Image (generated by PyMOL):