ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A978:A1001

Extra

PDB:
ATOM 1 O3' C A 977 -103.742 -97.207 10.346 1.00 29.68 O
ATOM 2 P G A 978 -103.796 -96.554 8.877 1.00 7.73 P
ATOM 3 OP1 G A 978 -102.968 -97.387 7.971 1.00 60.89 O
ATOM 4 OP2 G A 978 -103.505 -95.097 9.000 1.00 60.89 O
ATOM 5 O5' G A 978 -105.332 -96.688 8.472 1.00 21.70 O
ATOM 6 C5' G A 978 -105.918 -97.975 8.208 1.00 21.70 C
ATOM 7 C4' G A 978 -107.307 -97.821 7.629 1.00 21.70 C
ATOM 8 O4' G A 978 -108.252 -97.433 8.662 1.00 21.70 O
ATOM 9 C3' G A 978 -107.458 -96.762 6.549 1.00 21.70 C
ATOM 10 O3' G A 978 -107.068 -97.245 5.274 1.00 21.70 O
ATOM 11 C2' G A 978 -108.944 -96.443 6.608 1.00 21.70 C
ATOM 12 O2' G A 978 -109.696 -97.396 5.885 1.00 21.70 O
ATOM 13 C1' G A 978 -109.240 -96.578 8.107 1.00 21.70 C
ATOM 14 N9 G A 978 -109.174 -95.291 8.795 1.00 44.91 N
ATOM 15 C8 G A 978 -108.225 -94.886 9.701 1.00 44.91 C
ATOM 16 N7 G A 978 -108.391 -93.654 10.098 1.00 44.91 N
ATOM 17 C5 G A 978 -109.523 -93.227 9.424 1.00 44.91 C
ATOM 18 C6 G A 978 -110.170 -91.979 9.441 1.00 44.91 C
ATOM 19 O6 G A 978 -109.861 -90.969 10.058 1.00 44.91 O
ATOM 20 N1 G A 978 -111.281 -91.967 8.621 1.00 44.91 N
ATOM 21 C2 G A 978 -111.702 -93.020 7.865 1.00 44.91 C
ATOM 22 N2 G A 978 -112.775 -92.799 7.114 1.00 44.91 N
ATOM 23 N3 G A 978 -111.109 -94.198 7.838 1.00 44.91 N
ATOM 24 C4 G A 978 -110.030 -94.229 8.634 1.00 44.91 C
ATOM 25 P G A 979 -106.640 -96.203 4.128 1.00 13.23 P
ATOM 26 OP1 G A 979 -106.431 -96.977 2.875 1.00 89.41 O
ATOM 27 OP2 G A 979 -105.545 -95.342 4.643 1.00 89.41 O
ATOM 28 O5' G A 979 -107.954 -95.316 3.949 1.00 5.31 O
TER

ATOM 1 O3' U B1000 -121.206-103.451 7.716 1.00 34.20 O
ATOM 2 P A B1001 -121.112-102.102 6.894 1.00 41.73 P
ATOM 3 OP1 A B1001 -122.469-101.617 6.611 1.00 0.79 O
ATOM 4 OP2 A B1001 -120.136-102.285 5.782 1.00 0.79 O
ATOM 5 O5' A B1001 -120.482-101.097 7.936 1.00 31.47 O
ATOM 6 C5' A B1001 -120.038 -99.847 7.474 1.00 31.47 C
ATOM 7 C4' A B1001 -119.768 -98.913 8.608 1.00 31.47 C
ATOM 8 O4' A B1001 -118.691 -99.424 9.426 1.00 31.47 O
ATOM 9 C3' A B1001 -119.268 -97.612 8.031 1.00 31.47 C
ATOM 10 O3' A B1001 -120.416 -96.822 7.775 1.00 31.47 O
ATOM 11 C2' A B1001 -118.309 -97.107 9.098 1.00 31.47 C
ATOM 12 O2' A B1001 -119.007 -96.497 10.166 1.00 31.47 O
ATOM 13 C1' A B1001 -117.713 -98.424 9.608 1.00 31.47 C
ATOM 14 N9 A B1001 -116.501 -98.903 8.938 1.00 21.10 N
ATOM 15 C8 A B1001 -116.405-100.002 8.115 1.00 21.04 C
ATOM 16 N7 A B1001 -115.186-100.253 7.703 1.00 21.01 N
ATOM 17 C5 A B1001 -114.431 -99.246 8.275 1.00 20.99 C
ATOM 18 C6 A B1001 -113.065 -98.961 8.226 1.00 21.00 C
ATOM 19 N6 A B1001 -112.182 -99.702 7.555 1.00 20.99 N
ATOM 20 N1 A B1001 -112.625 -97.880 8.899 1.00 21.09 N
ATOM 21 C2 A B1001 -113.513 -97.147 9.577 1.00 21.19 C
ATOM 22 N3 A B1001 -114.826 -97.315 9.707 1.00 21.23 N
ATOM 23 C4 A B1001 -115.229 -98.395 9.023 1.00 21.10 C
ATOM 24 P A B1002 -121.008 -96.741 6.277 1.00 34.01 P
ATOM 25 OP1 A B1002 -122.412 -96.255 6.395 1.00 40.76 O
ATOM 26 OP2 A B1002 -120.728 -97.978 5.509 1.00 40.91 O
ATOM 27 O5' A B1002 -120.136 -95.578 5.632 1.00 32.21 O
TER

Atoms:
OP1: (-102.968,-97.387,7.971)
OP2: (-103.505,-95.097,9.000)
C3': (-107.458,-96.762,6.549)
C1': (-109.240,-96.578,8.107)
C5': (-105.918,-97.975,8.208)
O6: (-109.861,-90.969,10.058)
O4': (-108.252,-97.433,8.662)
C8: (-108.225,-94.886,9.701)
C2: (-111.702,-93.020,7.865)
C6: (-110.170,-91.979,9.441)
C5: (-109.523,-93.227,9.424)
C4: (-110.030,-94.229,8.634)
P: (-103.796,-96.554,8.877)
C4': (-107.307,-97.821,7.629)
C2': (-108.944,-96.443,6.608)
O2': (-109.696,-97.396,5.885)
N1: (-111.281,-91.967,8.621)
N2: (-112.775,-92.799,7.114)
N3: (-111.109,-94.198,7.838)
N7: (-108.391,-93.654,10.098)
N9: (-109.174,-95.291,8.795)
O5': (-105.332,-96.688,8.472)
O3': (-107.068,-97.245,5.274)
OP1: (-122.469,-101.617,6.611)
OP2: (-120.136,-102.285,5.782)
C3': (-119.268,-97.612,8.031)
C1': (-117.713,-98.424,9.608)
C5': (-120.038,-99.847,7.474)
O4': (-118.691,-99.424,9.426)
C8: (-116.405,-100.002,8.115)
O2': (-119.007,-96.497,10.166)
C6: (-113.065,-98.961,8.226)
C5: (-114.431,-99.246,8.275)
C4: (-115.229,-98.395,9.023)
P: (-121.112,-102.102,6.894)
C4': (-119.768,-98.913,8.608)
C2': (-118.309,-97.107,9.098)
C2: (-113.513,-97.147,9.577)
N1: (-112.625,-97.880,8.899)
N3: (-114.826,-97.315,9.707)
N6: (-112.182,-99.702,7.555)
N7: (-115.186,-100.253,7.703)
N9: (-116.501,-98.903,8.938)
O5': (-120.482,-101.097,7.936)
O3': (-120.416,-96.822,7.775)
Image (generated by PyMOL):
PyMOL image
show in jmol