ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QWY:B5:B36

Extra

PDB:
ATOM 1 O3' G A 4 17.269 15.591 24.793 1.00 59.77 O
ATOM 2 P G A 5 16.445 15.362 23.419 1.00 61.50 P
ATOM 3 OP1 G A 5 17.276 14.536 22.510 1.00 60.35 O
ATOM 4 OP2 G A 5 15.949 16.687 22.956 1.00 59.32 O
ATOM 5 O5' G A 5 15.191 14.472 23.844 1.00 60.21 O
ATOM 6 C5' G A 5 15.360 13.112 24.241 1.00 60.08 C
ATOM 7 C4' G A 5 14.035 12.378 24.209 1.00 60.45 C
ATOM 8 O4' G A 5 13.174 12.848 25.287 1.00 61.47 O
ATOM 9 C3' G A 5 13.201 12.569 22.956 1.00 61.23 C
ATOM 10 O3' G A 5 13.593 11.654 21.946 1.00 60.82 O
ATOM 11 C2' G A 5 11.807 12.242 23.467 1.00 61.82 C
ATOM 12 O2' G A 5 11.614 10.848 23.619 1.00 63.71 O
ATOM 13 C1' G A 5 11.829 12.928 24.835 1.00 61.03 C
ATOM 14 N9 G A 5 11.441 14.339 24.794 1.00 59.51 N
ATOM 15 C8 G A 5 12.280 15.425 24.851 1.00 60.02 C
ATOM 16 N7 G A 5 11.651 16.568 24.781 1.00 58.68 N
ATOM 17 C5 G A 5 10.316 16.219 24.673 1.00 57.07 C
ATOM 18 C6 G A 5 9.161 17.035 24.555 1.00 55.93 C
ATOM 19 O6 G A 5 9.083 18.275 24.518 1.00 49.77 O
ATOM 20 N1 G A 5 8.010 16.265 24.470 1.00 57.03 N
ATOM 21 C2 G A 5 7.973 14.892 24.488 1.00 57.96 C
ATOM 22 N2 G A 5 6.762 14.332 24.390 1.00 60.81 N
ATOM 23 N3 G A 5 9.038 14.124 24.594 1.00 57.86 N
ATOM 24 C4 G A 5 10.167 14.845 24.683 1.00 57.68 C
ATOM 25 P C A 6 13.254 11.977 20.411 1.00 62.09 P
ATOM 26 OP1 C A 6 13.687 10.794 19.646 1.00 62.58 O
ATOM 27 OP2 C A 6 13.802 13.316 20.065 1.00 59.83 O
ATOM 28 O5' C A 6 11.666 12.035 20.365 1.00 60.49 O
TER

ATOM 1 O3' A B 35 9.240 5.963 33.556 1.00 67.09 O
ATOM 2 P A B 36 8.247 5.102 32.626 1.00 67.47 P
ATOM 3 OP1 A B 36 7.456 4.214 33.517 1.00 66.06 O
ATOM 4 OP2 A B 36 9.027 4.525 31.498 1.00 66.74 O
ATOM 5 O5' A B 36 7.246 6.171 32.000 1.00 68.64 O
ATOM 6 C5' A B 36 6.265 6.819 32.800 1.00 67.38 C
ATOM 7 C4' A B 36 5.743 8.032 32.078 1.00 68.03 C
ATOM 8 O4' A B 36 6.855 8.925 31.800 1.00 66.67 O
ATOM 9 C3' A B 36 5.121 7.745 30.719 1.00 68.79 C
ATOM 10 O3' A B 36 3.729 7.493 30.869 1.00 71.20 O
ATOM 11 C2' A B 36 5.343 9.059 29.982 1.00 67.57 C
ATOM 12 O2' A B 36 4.385 10.037 30.334 1.00 67.19 O
ATOM 13 C1' A B 36 6.721 9.468 30.501 1.00 66.14 C
ATOM 14 N9 A B 36 7.805 8.942 29.684 1.00 63.47 N
ATOM 15 C8 A B 36 8.373 7.700 29.759 1.00 63.91 C
ATOM 16 N7 A B 36 9.328 7.501 28.884 1.00 64.99 N
ATOM 17 C5 A B 36 9.395 8.698 28.187 1.00 64.20 C
ATOM 18 C6 A B 36 10.208 9.129 27.121 1.00 64.56 C
ATOM 19 N6 A B 36 11.163 8.372 26.566 1.00 65.06 N
ATOM 20 N1 A B 36 10.009 10.380 26.642 1.00 63.59 N
ATOM 21 C2 A B 36 9.062 11.139 27.214 1.00 63.10 C
ATOM 22 N3 A B 36 8.243 10.847 28.229 1.00 62.98 N
ATOM 23 C4 A B 36 8.462 9.597 28.671 1.00 63.64 C
ATOM 24 P U B 37 2.956 6.603 29.778 1.00 74.04 P
ATOM 25 OP1 U B 37 1.516 6.576 30.161 1.00 73.12 O
ATOM 26 OP2 U B 37 3.699 5.327 29.602 1.00 71.72 O
ATOM 27 O5' U B 37 3.110 7.429 28.426 1.00 74.17 O
TER

Atoms:
OP1: (17.276,14.536,22.510)
OP2: (15.949,16.687,22.956)
C3': (13.201,12.569,22.956)
C1': (11.829,12.928,24.835)
C5': (15.360,13.112,24.241)
O6: (9.083,18.275,24.518)
O4': (13.174,12.848,25.287)
C8: (12.280,15.425,24.851)
C2: (7.973,14.892,24.488)
C6: (9.161,17.035,24.555)
C5: (10.316,16.219,24.673)
C4: (10.167,14.845,24.683)
P: (16.445,15.362,23.419)
C4': (14.035,12.378,24.209)
C2': (11.807,12.242,23.467)
O2': (11.614,10.848,23.619)
N1: (8.010,16.265,24.470)
N2: (6.762,14.332,24.390)
N3: (9.038,14.124,24.594)
N7: (11.651,16.568,24.781)
N9: (11.441,14.339,24.794)
O5': (15.191,14.472,23.844)
O3': (13.593,11.654,21.946)
OP1: (7.456,4.214,33.517)
OP2: (9.027,4.525,31.498)
C3': (5.121,7.745,30.719)
C1': (6.721,9.468,30.501)
C5': (6.265,6.819,32.800)
O4': (6.855,8.925,31.800)
C8: (8.373,7.700,29.759)
O2': (4.385,10.037,30.334)
C6: (10.208,9.129,27.121)
C5: (9.395,8.698,28.187)
C4: (8.462,9.597,28.671)
P: (8.247,5.102,32.626)
C4': (5.743,8.032,32.078)
C2': (5.343,9.059,29.982)
C2: (9.062,11.139,27.214)
N1: (10.009,10.380,26.642)
N3: (8.243,10.847,28.229)
N6: (11.163,8.372,26.566)
N7: (9.328,7.501,28.884)
N9: (7.805,8.942,29.684)
O5': (7.246,6.171,32.000)
O3': (3.729,7.493,30.869)
Image (generated by PyMOL):
PyMOL image
show in jmol