ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A222:A252

Extra

PDB:
ATOM 1 O3' G A 221 119.003 68.412 -9.634 1.00 46.76 O
ATOM 2 P G A 222 119.647 69.106 -10.946 1.00 37.70 P
ATOM 3 OP1 G A 222 121.105 68.808 -10.941 1.00 44.20 O
ATOM 4 OP2 G A 222 119.190 70.517 -11.002 1.00 44.20 O
ATOM 5 O5' G A 222 118.997 68.319 -12.169 1.00 37.70 O
ATOM 6 C5' G A 222 119.274 66.926 -12.372 1.00 37.70 C
ATOM 7 C4' G A 222 118.658 66.451 -13.663 1.00 37.70 C
ATOM 8 O4' G A 222 117.220 66.633 -13.617 1.00 37.70 O
ATOM 9 C3' G A 222 119.074 67.198 -14.914 1.00 37.70 C
ATOM 10 O3' G A 222 120.294 66.716 -15.427 1.00 37.70 O
ATOM 11 C2' G A 222 117.923 66.917 -15.859 1.00 37.70 C
ATOM 12 O2' G A 222 118.022 65.618 -16.383 1.00 37.70 O
ATOM 13 C1' G A 222 116.736 66.956 -14.906 1.00 37.70 C
ATOM 14 N9 G A 222 116.121 68.277 -14.846 1.00 44.20 N
ATOM 15 C8 G A 222 116.255 69.210 -13.851 1.00 44.20 C
ATOM 16 N7 G A 222 115.551 70.287 -14.063 1.00 44.20 N
ATOM 17 C5 G A 222 114.920 70.052 -15.275 1.00 44.20 C
ATOM 18 C6 G A 222 114.013 70.855 -16.008 1.00 44.20 C
ATOM 19 O6 G A 222 113.560 71.980 -15.723 1.00 44.20 O
ATOM 20 N1 G A 222 113.622 70.230 -17.186 1.00 44.20 N
ATOM 21 C2 G A 222 114.047 68.999 -17.607 1.00 44.20 C
ATOM 22 N2 G A 222 113.561 68.578 -18.781 1.00 44.20 N
ATOM 23 N3 G A 222 114.884 68.242 -16.932 1.00 44.20 N
ATOM 24 C4 G A 222 115.275 68.825 -15.779 1.00 44.20 C
ATOM 25 P C A 223 121.344 67.754 -16.047 1.00 40.62 P
ATOM 26 OP1 C A 223 122.606 67.027 -16.320 1.00 39.65 O
ATOM 27 OP2 C A 223 121.350 68.959 -15.174 1.00 39.65 O
ATOM 28 O5' C A 223 120.682 68.170 -17.423 1.00 40.62 O
TER

ATOM 1 O3' U B 251 113.957 56.872 -18.403 1.00 69.70 O
ATOM 2 P A B 252 112.499 56.535 -17.816 1.00 48.92 P
ATOM 3 OP1 A B 252 112.619 56.276 -16.352 1.00 53.74 O
ATOM 4 OP2 A B 252 111.909 55.515 -18.718 1.00 53.74 O
ATOM 5 O5' A B 252 111.677 57.880 -18.015 1.00 48.92 O
ATOM 6 C5' A B 252 110.274 57.944 -17.750 1.00 48.92 C
ATOM 7 C4' A B 252 109.839 59.383 -17.735 1.00 48.92 C
ATOM 8 O4' A B 252 110.405 60.047 -16.579 1.00 48.92 O
ATOM 9 C3' A B 252 110.337 60.164 -18.936 1.00 48.92 C
ATOM 10 O3' A B 252 109.394 60.054 -19.979 1.00 48.92 O
ATOM 11 C2' A B 252 110.460 61.586 -18.407 1.00 48.92 C
ATOM 12 O2' A B 252 109.234 62.290 -18.463 1.00 48.92 O
ATOM 13 C1' A B 252 110.846 61.340 -16.942 1.00 48.92 C
ATOM 14 N9 A B 252 112.277 61.418 -16.642 1.00 53.74 N
ATOM 15 C8 A B 252 113.126 60.371 -16.382 1.00 53.74 C
ATOM 16 N7 A B 252 114.338 60.741 -16.060 1.00 53.74 N
ATOM 17 C5 A B 252 114.293 62.125 -16.128 1.00 53.74 C
ATOM 18 C6 A B 252 115.256 63.109 -15.877 1.00 53.74 C
ATOM 19 N6 A B 252 116.503 62.839 -15.482 1.00 53.74 N
ATOM 20 N1 A B 252 114.894 64.398 -16.044 1.00 53.74 N
ATOM 21 C2 A B 252 113.647 64.664 -16.435 1.00 53.74 C
ATOM 22 N3 A B 252 112.647 63.826 -16.693 1.00 53.74 N
ATOM 23 C4 A B 252 113.039 62.555 -16.513 1.00 53.74 C
ATOM 24 P A B 253 109.893 59.729 -21.458 1.00 45.27 P
ATOM 25 OP1 A B 253 108.686 59.438 -22.267 1.00 45.67 O
ATOM 26 OP2 A B 253 110.996 58.746 -21.403 1.00 45.67 O
ATOM 27 O5' A B 253 110.470 61.121 -21.942 1.00 45.27 O
TER

Atoms:
OP1: (121.105,68.808,-10.941)
OP2: (119.190,70.517,-11.002)
C3': (119.074,67.198,-14.914)
C1': (116.736,66.956,-14.906)
C5': (119.274,66.926,-12.372)
O6: (113.560,71.980,-15.723)
O4': (117.220,66.633,-13.617)
C8: (116.255,69.210,-13.851)
C2: (114.047,68.999,-17.607)
C6: (114.013,70.855,-16.008)
C5: (114.920,70.052,-15.275)
C4: (115.275,68.825,-15.779)
P: (119.647,69.106,-10.946)
C4': (118.658,66.451,-13.663)
C2': (117.923,66.917,-15.859)
O2': (118.022,65.618,-16.383)
N1: (113.622,70.230,-17.186)
N2: (113.561,68.578,-18.781)
N3: (114.884,68.242,-16.932)
N7: (115.551,70.287,-14.063)
N9: (116.121,68.277,-14.846)
O5': (118.997,68.319,-12.169)
O3': (120.294,66.716,-15.427)
OP1: (112.619,56.276,-16.352)
OP2: (111.909,55.515,-18.718)
C3': (110.337,60.164,-18.936)
C1': (110.846,61.340,-16.942)
C5': (110.274,57.944,-17.750)
O4': (110.405,60.047,-16.579)
C8: (113.126,60.371,-16.382)
O2': (109.234,62.290,-18.463)
C6: (115.256,63.109,-15.877)
C5: (114.293,62.125,-16.128)
C4: (113.039,62.555,-16.513)
P: (112.499,56.535,-17.816)
C4': (109.839,59.383,-17.735)
C2': (110.460,61.586,-18.407)
C2: (113.647,64.664,-16.435)
N1: (114.894,64.398,-16.044)
N3: (112.647,63.826,-16.693)
N6: (116.503,62.839,-15.482)
N7: (114.338,60.741,-16.060)
N9: (112.277,61.418,-16.642)
O5': (111.677,57.880,-18.015)
O3': (109.394,60.054,-19.979)
Image (generated by PyMOL):
PyMOL image
show in jmol