Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A222:A252
Extra
PDB:
ATOM 1 O3' G A 221 119.470 68.598 -9.487 1.00 29.98 O
ATOM 2 P G A 222 120.145 69.238 -10.805 1.00 30.16 P
ATOM 3 OP1 G A 222 121.576 68.812 -10.820 1.00 31.61 O
ATOM 4 OP2 G A 222 119.802 70.681 -10.837 1.00 28.58 O
ATOM 5 O5' G A 222 119.431 68.489 -12.021 1.00 28.06 O
ATOM 6 C5' G A 222 119.670 67.097 -12.244 1.00 26.00 C
ATOM 7 C4' G A 222 119.059 66.651 -13.545 1.00 25.46 C
ATOM 8 O4' G A 222 117.631 66.868 -13.514 1.00 26.12 O
ATOM 9 C3' G A 222 119.511 67.368 -14.798 1.00 25.37 C
ATOM 10 O3' G A 222 120.721 66.848 -15.274 1.00 26.90 O
ATOM 11 C2' G A 222 118.360 67.097 -15.753 1.00 25.21 C
ATOM 12 O2' G A 222 118.422 65.784 -16.265 1.00 23.27 O
ATOM 13 C1' G A 222 117.162 67.175 -14.814 1.00 24.83 C
ATOM 14 N9 G A 222 116.557 68.501 -14.765 1.00 24.83 N
ATOM 15 C8 G A 222 116.664 69.402 -13.738 1.00 26.35 C
ATOM 16 N7 G A 222 115.995 70.501 -13.950 1.00 28.71 N
ATOM 17 C5 G A 222 115.417 70.320 -15.199 1.00 27.38 C
ATOM 18 C6 G A 222 114.585 71.182 -15.953 1.00 28.84 C
ATOM 19 O6 G A 222 114.159 72.312 -15.649 1.00 30.55 O
ATOM 20 N1 G A 222 114.244 70.620 -17.177 1.00 28.20 N
ATOM 21 C2 G A 222 114.641 69.388 -17.617 1.00 27.22 C
ATOM 22 N2 G A 222 114.206 69.040 -18.846 1.00 28.66 N
ATOM 23 N3 G A 222 115.406 68.564 -16.916 1.00 26.70 N
ATOM 24 C4 G A 222 115.759 69.095 -15.723 1.00 26.34 C
ATOM 25 P C A 223 121.813 67.842 -15.901 1.00 27.87 P
ATOM 26 OP1 C A 223 123.004 67.045 -16.313 1.00 27.16 O
ATOM 27 OP2 C A 223 121.963 68.974 -14.945 1.00 29.38 O
ATOM 28 O5' C A 223 121.120 68.310 -17.224 1.00 26.43 O
TER
ATOM 1 O3' U B 251 114.411 56.963 -18.357 1.00 39.62 O
ATOM 2 P A B 252 112.952 56.612 -17.768 1.00 38.61 P
ATOM 3 OP1 A B 252 112.266 55.824 -18.836 1.00 38.94 O
ATOM 4 OP2 A B 252 113.137 56.063 -16.399 1.00 38.85 O
ATOM 5 O5' A B 252 112.221 58.019 -17.655 1.00 37.79 O
ATOM 6 C5' A B 252 110.790 58.121 -17.538 1.00 36.40 C
ATOM 7 C4' A B 252 110.372 59.568 -17.645 1.00 36.02 C
ATOM 8 O4' A B 252 110.908 60.305 -16.518 1.00 35.80 O
ATOM 9 C3' A B 252 110.920 60.255 -18.880 1.00 35.01 C
ATOM 10 O3' A B 252 110.025 60.107 -19.951 1.00 33.85 O
ATOM 11 C2' A B 252 111.085 61.706 -18.445 1.00 36.55 C
ATOM 12 O2' A B 252 109.901 62.461 -18.589 1.00 37.46 O
ATOM 13 C1' A B 252 111.413 61.556 -16.954 1.00 37.41 C
ATOM 14 N9 A B 252 112.839 61.610 -16.607 1.00 38.77 N
ATOM 15 C8 A B 252 113.666 60.544 -16.333 1.00 39.24 C
ATOM 16 N7 A B 252 114.876 60.890 -15.969 1.00 39.71 N
ATOM 17 C5 A B 252 114.855 62.277 -16.017 1.00 38.60 C
ATOM 18 C6 A B 252 115.827 63.247 -15.714 1.00 37.20 C
ATOM 19 N6 A B 252 117.044 62.959 -15.259 1.00 35.98 N
ATOM 20 N1 A B 252 115.496 64.542 -15.884 1.00 38.82 N
ATOM 21 C2 A B 252 114.263 64.837 -16.315 1.00 39.67 C
ATOM 22 N3 A B 252 113.255 64.017 -16.616 1.00 40.62 N
ATOM 23 C4 A B 252 113.618 62.735 -16.441 1.00 39.38 C
ATOM 24 P A B 253 110.601 59.995 -21.439 1.00 35.86 P
ATOM 25 OP1 A B 253 109.513 59.710 -22.430 1.00 34.98 O
ATOM 26 OP2 A B 253 111.766 59.094 -21.340 1.00 38.34 O
ATOM 27 O5' A B 253 111.114 61.444 -21.734 1.00 35.29 O
TER
ATOM 2 P G A 222 120.145 69.238 -10.805 1.00 30.16 P
ATOM 3 OP1 G A 222 121.576 68.812 -10.820 1.00 31.61 O
ATOM 4 OP2 G A 222 119.802 70.681 -10.837 1.00 28.58 O
ATOM 5 O5' G A 222 119.431 68.489 -12.021 1.00 28.06 O
ATOM 6 C5' G A 222 119.670 67.097 -12.244 1.00 26.00 C
ATOM 7 C4' G A 222 119.059 66.651 -13.545 1.00 25.46 C
ATOM 8 O4' G A 222 117.631 66.868 -13.514 1.00 26.12 O
ATOM 9 C3' G A 222 119.511 67.368 -14.798 1.00 25.37 C
ATOM 10 O3' G A 222 120.721 66.848 -15.274 1.00 26.90 O
ATOM 11 C2' G A 222 118.360 67.097 -15.753 1.00 25.21 C
ATOM 12 O2' G A 222 118.422 65.784 -16.265 1.00 23.27 O
ATOM 13 C1' G A 222 117.162 67.175 -14.814 1.00 24.83 C
ATOM 14 N9 G A 222 116.557 68.501 -14.765 1.00 24.83 N
ATOM 15 C8 G A 222 116.664 69.402 -13.738 1.00 26.35 C
ATOM 16 N7 G A 222 115.995 70.501 -13.950 1.00 28.71 N
ATOM 17 C5 G A 222 115.417 70.320 -15.199 1.00 27.38 C
ATOM 18 C6 G A 222 114.585 71.182 -15.953 1.00 28.84 C
ATOM 19 O6 G A 222 114.159 72.312 -15.649 1.00 30.55 O
ATOM 20 N1 G A 222 114.244 70.620 -17.177 1.00 28.20 N
ATOM 21 C2 G A 222 114.641 69.388 -17.617 1.00 27.22 C
ATOM 22 N2 G A 222 114.206 69.040 -18.846 1.00 28.66 N
ATOM 23 N3 G A 222 115.406 68.564 -16.916 1.00 26.70 N
ATOM 24 C4 G A 222 115.759 69.095 -15.723 1.00 26.34 C
ATOM 25 P C A 223 121.813 67.842 -15.901 1.00 27.87 P
ATOM 26 OP1 C A 223 123.004 67.045 -16.313 1.00 27.16 O
ATOM 27 OP2 C A 223 121.963 68.974 -14.945 1.00 29.38 O
ATOM 28 O5' C A 223 121.120 68.310 -17.224 1.00 26.43 O
TER
ATOM 1 O3' U B 251 114.411 56.963 -18.357 1.00 39.62 O
ATOM 2 P A B 252 112.952 56.612 -17.768 1.00 38.61 P
ATOM 3 OP1 A B 252 112.266 55.824 -18.836 1.00 38.94 O
ATOM 4 OP2 A B 252 113.137 56.063 -16.399 1.00 38.85 O
ATOM 5 O5' A B 252 112.221 58.019 -17.655 1.00 37.79 O
ATOM 6 C5' A B 252 110.790 58.121 -17.538 1.00 36.40 C
ATOM 7 C4' A B 252 110.372 59.568 -17.645 1.00 36.02 C
ATOM 8 O4' A B 252 110.908 60.305 -16.518 1.00 35.80 O
ATOM 9 C3' A B 252 110.920 60.255 -18.880 1.00 35.01 C
ATOM 10 O3' A B 252 110.025 60.107 -19.951 1.00 33.85 O
ATOM 11 C2' A B 252 111.085 61.706 -18.445 1.00 36.55 C
ATOM 12 O2' A B 252 109.901 62.461 -18.589 1.00 37.46 O
ATOM 13 C1' A B 252 111.413 61.556 -16.954 1.00 37.41 C
ATOM 14 N9 A B 252 112.839 61.610 -16.607 1.00 38.77 N
ATOM 15 C8 A B 252 113.666 60.544 -16.333 1.00 39.24 C
ATOM 16 N7 A B 252 114.876 60.890 -15.969 1.00 39.71 N
ATOM 17 C5 A B 252 114.855 62.277 -16.017 1.00 38.60 C
ATOM 18 C6 A B 252 115.827 63.247 -15.714 1.00 37.20 C
ATOM 19 N6 A B 252 117.044 62.959 -15.259 1.00 35.98 N
ATOM 20 N1 A B 252 115.496 64.542 -15.884 1.00 38.82 N
ATOM 21 C2 A B 252 114.263 64.837 -16.315 1.00 39.67 C
ATOM 22 N3 A B 252 113.255 64.017 -16.616 1.00 40.62 N
ATOM 23 C4 A B 252 113.618 62.735 -16.441 1.00 39.38 C
ATOM 24 P A B 253 110.601 59.995 -21.439 1.00 35.86 P
ATOM 25 OP1 A B 253 109.513 59.710 -22.430 1.00 34.98 O
ATOM 26 OP2 A B 253 111.766 59.094 -21.340 1.00 38.34 O
ATOM 27 O5' A B 253 111.114 61.444 -21.734 1.00 35.29 O
TER
Atoms:
OP1: (121.576,68.812,-10.820)
OP2: (119.802,70.681,-10.837)
C3': (119.511,67.368,-14.798)
C1': (117.162,67.175,-14.814)
C5': (119.670,67.097,-12.244)
O6: (114.159,72.312,-15.649)
O4': (117.631,66.868,-13.514)
C8: (116.664,69.402,-13.738)
C2: (114.641,69.388,-17.617)
C6: (114.585,71.182,-15.953)
C5: (115.417,70.320,-15.199)
C4: (115.759,69.095,-15.723)
P: (120.145,69.238,-10.805)
C4': (119.059,66.651,-13.545)
C2': (118.360,67.097,-15.753)
O2': (118.422,65.784,-16.265)
N1: (114.244,70.620,-17.177)
N2: (114.206,69.040,-18.846)
N3: (115.406,68.564,-16.916)
N7: (115.995,70.501,-13.950)
N9: (116.557,68.501,-14.765)
O5': (119.431,68.489,-12.021)
O3': (120.721,66.848,-15.274)
OP2: (119.802,70.681,-10.837)
C3': (119.511,67.368,-14.798)
C1': (117.162,67.175,-14.814)
C5': (119.670,67.097,-12.244)
O6: (114.159,72.312,-15.649)
O4': (117.631,66.868,-13.514)
C8: (116.664,69.402,-13.738)
C2: (114.641,69.388,-17.617)
C6: (114.585,71.182,-15.953)
C5: (115.417,70.320,-15.199)
C4: (115.759,69.095,-15.723)
P: (120.145,69.238,-10.805)
C4': (119.059,66.651,-13.545)
C2': (118.360,67.097,-15.753)
O2': (118.422,65.784,-16.265)
N1: (114.244,70.620,-17.177)
N2: (114.206,69.040,-18.846)
N3: (115.406,68.564,-16.916)
N7: (115.995,70.501,-13.950)
N9: (116.557,68.501,-14.765)
O5': (119.431,68.489,-12.021)
O3': (120.721,66.848,-15.274)
OP1: (112.266,55.824,-18.836)
OP2: (113.137,56.063,-16.399)
C3': (110.920,60.255,-18.880)
C1': (111.413,61.556,-16.954)
C5': (110.790,58.121,-17.538)
O4': (110.908,60.305,-16.518)
C8: (113.666,60.544,-16.333)
O2': (109.901,62.461,-18.589)
C6: (115.827,63.247,-15.714)
C5: (114.855,62.277,-16.017)
C4: (113.618,62.735,-16.441)
P: (112.952,56.612,-17.768)
C4': (110.372,59.568,-17.645)
C2': (111.085,61.706,-18.445)
C2: (114.263,64.837,-16.315)
N1: (115.496,64.542,-15.884)
N3: (113.255,64.017,-16.616)
N6: (117.044,62.959,-15.259)
N7: (114.876,60.890,-15.969)
N9: (112.839,61.610,-16.607)
O5': (112.221,58.019,-17.655)
O3': (110.025,60.107,-19.951)
OP2: (113.137,56.063,-16.399)
C3': (110.920,60.255,-18.880)
C1': (111.413,61.556,-16.954)
C5': (110.790,58.121,-17.538)
O4': (110.908,60.305,-16.518)
C8: (113.666,60.544,-16.333)
O2': (109.901,62.461,-18.589)
C6: (115.827,63.247,-15.714)
C5: (114.855,62.277,-16.017)
C4: (113.618,62.735,-16.441)
P: (112.952,56.612,-17.768)
C4': (110.372,59.568,-17.645)
C2': (111.085,61.706,-18.445)
C2: (114.263,64.837,-16.315)
N1: (115.496,64.542,-15.884)
N3: (113.255,64.017,-16.616)
N6: (117.044,62.959,-15.259)
N7: (114.876,60.890,-15.969)
N9: (112.839,61.610,-16.607)
O5': (112.221,58.019,-17.655)
O3': (110.025,60.107,-19.951)
Image (generated by PyMOL):