ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCJ:0553:01052

Extra

PDB:
ATOM 1 O3' G A 552 -5.941 94.152 96.850 1.00 75.35 O
ATOM 2 P A A 553 -5.241 93.367 98.056 1.00 75.23 P
ATOM 3 OP1 A A 553 -5.686 91.957 97.982 1.00 75.24 O
ATOM 4 OP2 A A 553 -5.440 94.132 99.299 1.00 76.31 O
ATOM 5 O5' A A 553 -3.694 93.408 97.694 1.00 75.02 O
ATOM 6 C5' A A 553 -3.175 92.569 96.648 1.00 74.27 C
ATOM 7 C4' A A 553 -1.677 92.725 96.530 1.00 71.97 C
ATOM 8 O4' A A 553 -1.349 94.059 96.068 1.00 70.51 O
ATOM 9 C3' A A 553 -0.874 92.576 97.809 1.00 70.86 C
ATOM 10 O3' A A 553 -0.686 91.198 98.140 1.00 70.82 O
ATOM 11 C2' A A 553 0.426 93.266 97.419 1.00 69.88 C
ATOM 12 O2' A A 553 1.188 92.471 96.540 1.00 70.79 O
ATOM 13 C1' A A 553 -0.095 94.441 96.595 1.00 68.93 C
ATOM 14 N9 A A 553 -0.267 95.681 97.345 1.00 67.60 N
ATOM 15 C8 A A 553 -1.435 96.254 97.779 1.00 67.41 C
ATOM 16 N7 A A 553 -1.266 97.412 98.371 1.00 66.81 N
ATOM 17 C5 A A 553 0.108 97.608 98.334 1.00 66.22 C
ATOM 18 C6 A A 553 0.928 98.657 98.781 1.00 65.26 C
ATOM 19 N6 A A 553 0.469 99.767 99.348 1.00 65.43 N
ATOM 20 N1 A A 553 2.257 98.529 98.611 1.00 64.77 N
ATOM 21 C2 A A 553 2.721 97.430 98.013 1.00 65.30 C
ATOM 22 N3 A A 553 2.053 96.387 97.533 1.00 66.30 N
ATOM 23 C4 A A 553 0.735 96.539 97.727 1.00 66.59 C
ATOM 24 P A A 554 -0.855 90.702 99.667 1.00 71.45 P
ATOM 25 OP1 A A 554 -1.134 89.237 99.601 1.00 70.60 O
ATOM 26 OP2 A A 554 -1.803 91.603 100.384 1.00 69.47 O
ATOM 27 O5' A A 554 0.587 90.923 100.306 1.00 67.98 O
TER

ATOM 1 O3' A B1051 5.865 105.847 97.529 1.00 61.30 O
ATOM 2 P G B1052 6.259 105.694 99.066 1.00 63.37 P
ATOM 3 OP1 G B1052 5.562 106.788 99.775 1.00 65.20 O
ATOM 4 OP2 G B1052 7.740 105.588 99.156 1.00 64.05 O
ATOM 5 O5' G B1052 5.627 104.289 99.486 1.00 62.80 O
ATOM 6 C5' G B1052 4.208 104.163 99.714 1.00 60.64 C
ATOM 7 C4' G B1052 3.849 102.766 100.179 1.00 58.35 C
ATOM 8 O4' G B1052 4.204 101.808 99.155 1.00 57.72 O
ATOM 9 C3' G B1052 4.538 102.232 101.421 1.00 57.14 C
ATOM 10 O3' G B1052 3.920 102.677 102.611 1.00 59.24 O
ATOM 11 C2' G B1052 4.327 100.739 101.266 1.00 56.11 C
ATOM 12 O2' G B1052 3.002 100.389 101.604 1.00 54.63 O
ATOM 13 C1' G B1052 4.530 100.570 99.760 1.00 55.92 C
ATOM 14 N9 G B1052 5.904 100.241 99.400 1.00 53.99 N
ATOM 15 C8 G B1052 6.860 101.100 98.919 1.00 53.12 C
ATOM 16 N7 G B1052 7.997 100.512 98.675 1.00 53.43 N
ATOM 17 C5 G B1052 7.780 99.183 99.018 1.00 53.32 C
ATOM 18 C6 G B1052 8.653 98.057 98.967 1.00 52.46 C
ATOM 19 O6 G B1052 9.827 98.006 98.591 1.00 50.88 O
ATOM 20 N1 G B1052 8.023 96.902 99.410 1.00 51.39 N
ATOM 21 C2 G B1052 6.727 96.828 99.836 1.00 51.56 C
ATOM 22 N2 G B1052 6.299 95.616 100.204 1.00 51.15 N
ATOM 23 N3 G B1052 5.907 97.862 99.892 1.00 52.65 N
ATOM 24 C4 G B1052 6.495 99.001 99.470 1.00 53.18 C
ATOM 25 P G B1053 4.723 102.588 104.001 1.00 62.50 P
ATOM 26 OP1 G B1053 3.728 102.876 105.076 1.00 62.07 O
ATOM 27 OP2 G B1053 5.937 103.443 103.879 1.00 61.86 O
ATOM 28 O5' G B1053 5.179 101.053 104.104 1.00 58.82 O
TER

Atoms:
OP1: (-5.686,91.957,97.982)
OP2: (-5.440,94.132,99.299)
C3': (-0.874,92.576,97.809)
C1': (-0.095,94.441,96.595)
C5': (-3.175,92.569,96.648)
O4': (-1.349,94.059,96.068)
C8: (-1.435,96.254,97.779)
O2': (1.188,92.471,96.540)
C6: (0.928,98.657,98.781)
C5: (0.108,97.608,98.334)
C4: (0.735,96.539,97.727)
P: (-5.241,93.367,98.056)
C4': (-1.677,92.725,96.530)
C2': (0.426,93.266,97.419)
C2: (2.721,97.430,98.013)
N1: (2.257,98.529,98.611)
N3: (2.053,96.387,97.533)
N6: (0.469,99.767,99.348)
N7: (-1.266,97.412,98.371)
N9: (-0.267,95.681,97.345)
O5': (-3.694,93.408,97.694)
O3': (-0.686,91.198,98.140)
OP1: (5.562,106.788,99.775)
OP2: (7.740,105.588,99.156)
C3': (4.538,102.232,101.421)
C1': (4.530,100.570,99.760)
C5': (4.208,104.163,99.714)
O6: (9.827,98.006,98.591)
O4': (4.204,101.808,99.155)
C8: (6.860,101.100,98.919)
C2: (6.727,96.828,99.836)
C6: (8.653,98.057,98.967)
C5: (7.780,99.183,99.018)
C4: (6.495,99.001,99.470)
P: (6.259,105.694,99.066)
C4': (3.849,102.766,100.179)
C2': (4.327,100.739,101.266)
O2': (3.002,100.389,101.604)
N1: (8.023,96.902,99.410)
N2: (6.299,95.616,100.204)
N3: (5.907,97.862,99.892)
N7: (7.997,100.512,98.675)
N9: (5.904,100.241,99.400)
O5': (5.627,104.289,99.486)
O3': (3.920,102.677,102.611)
Image (generated by PyMOL):
PyMOL image
show in jmol