ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:01061:01206

Extra

PDB:
ATOM 1 O3' U A1060 18.788 104.504 123.783 1.00 35.19 O
ATOM 2 P C A1061 19.150 104.271 125.321 1.00 35.06 P
ATOM 3 OP1 C A1061 20.550 103.816 125.390 1.00 37.25 O
ATOM 4 OP2 C A1061 18.087 103.416 125.892 1.00 39.83 O
ATOM 5 O5' C A1061 19.043 105.721 125.959 1.00 32.74 O
ATOM 6 C5' C A1061 17.871 106.132 126.671 1.00 32.53 C
ATOM 7 C4' C A1061 18.045 107.551 127.146 1.00 34.22 C
ATOM 8 O4' C A1061 19.230 107.610 127.985 1.00 34.96 O
ATOM 9 C3' C A1061 18.336 108.548 126.039 1.00 34.75 C
ATOM 10 O3' C A1061 17.136 109.007 125.434 1.00 37.99 O
ATOM 11 C2' C A1061 19.096 109.644 126.772 1.00 34.72 C
ATOM 12 O2' C A1061 18.256 110.495 127.527 1.00 37.39 O
ATOM 13 C1' C A1061 19.931 108.819 127.747 1.00 32.30 C
ATOM 14 N1 C A1061 21.292 108.491 127.281 1.00 30.30 N
ATOM 15 C2 C A1061 22.244 109.521 127.204 1.00 31.25 C
ATOM 16 O2 C A1061 21.882 110.698 127.418 1.00 31.60 O
ATOM 17 N3 C A1061 23.527 109.211 126.885 1.00 30.45 N
ATOM 18 C4 C A1061 23.860 107.945 126.614 1.00 29.32 C
ATOM 19 N4 C A1061 25.145 107.679 126.333 1.00 29.82 N
ATOM 20 C5 C A1061 22.898 106.893 126.626 1.00 26.72 C
ATOM 21 C6 C A1061 21.640 107.207 126.963 1.00 27.61 C
ATOM 22 P C A1062 17.154 109.489 123.899 1.00 40.26 P
ATOM 23 OP1 C A1062 15.756 109.817 123.528 1.00 42.97 O
ATOM 24 OP2 C A1062 17.931 108.517 123.063 1.00 38.34 O
ATOM 25 O5' C A1062 17.966 110.860 123.948 1.00 39.17 O
TER

ATOM 1 O3' A B1205 22.659 103.234 133.382 1.00 38.51 O
ATOM 2 P A B1206 21.216 103.472 132.733 1.00 39.35 P
ATOM 3 OP1 A B1206 20.611 104.619 133.495 1.00 36.20 O
ATOM 4 OP2 A B1206 20.515 102.164 132.689 1.00 38.19 O
ATOM 5 O5' A B1206 21.563 103.936 131.239 1.00 37.01 O
ATOM 6 C5' A B1206 22.052 102.986 130.247 1.00 35.88 C
ATOM 7 C4' A B1206 23.388 103.435 129.667 1.00 34.77 C
ATOM 8 O4' A B1206 23.268 104.813 129.213 1.00 35.63 O
ATOM 9 C3' A B1206 24.594 103.413 130.601 1.00 33.88 C
ATOM 10 O3' A B1206 25.759 103.209 129.810 1.00 36.19 O
ATOM 11 C2' A B1206 24.619 104.848 131.131 1.00 34.69 C
ATOM 12 O2' A B1206 25.899 105.285 131.552 1.00 35.05 O
ATOM 13 C1' A B1206 24.205 105.627 129.888 1.00 33.34 C
ATOM 14 N9 A B1206 23.571 106.912 130.167 1.00 33.45 N
ATOM 15 C8 A B1206 22.287 107.144 130.603 1.00 34.47 C
ATOM 16 N7 A B1206 21.998 108.423 130.738 1.00 35.10 N
ATOM 17 C5 A B1206 23.170 109.071 130.371 1.00 32.87 C
ATOM 18 C6 A B1206 23.519 110.433 130.299 1.00 32.00 C
ATOM 19 N6 A B1206 22.692 111.435 130.613 1.00 31.91 N
ATOM 20 N1 A B1206 24.767 110.740 129.890 1.00 31.07 N
ATOM 21 C2 A B1206 25.602 109.747 129.586 1.00 31.96 C
ATOM 22 N3 A B1206 25.397 108.431 129.619 1.00 34.97 N
ATOM 23 C4 A B1206 24.147 108.154 130.022 1.00 33.42 C
ATOM 24 P A B1207 26.265 101.718 129.465 1.00 40.27 P
ATOM 25 OP1 A B1207 26.697 101.780 128.033 1.00 41.08 O
ATOM 26 OP2 A B1207 25.246 100.715 129.883 1.00 41.30 O
ATOM 27 O5' A B1207 27.572 101.495 130.358 1.00 40.27 O
TER

Atoms:
C2: (22.244,109.521,127.204)
OP1: (20.550,103.816,125.390)
OP2: (18.087,103.416,125.892)
C4: (23.860,107.945,126.614)
O5': (19.043,105.721,125.959)
C3': (18.336,108.548,126.039)
C1': (19.931,108.819,127.747)
O4': (19.230,107.610,127.985)
C5': (17.871,106.132,126.671)
P: (19.150,104.271,125.321)
O2: (21.882,110.698,127.418)
C4': (18.045,107.551,127.146)
C2': (19.096,109.644,126.772)
O2': (18.256,110.495,127.527)
N1: (21.292,108.491,127.281)
N3: (23.527,109.211,126.885)
N4: (25.145,107.679,126.333)
C6: (21.640,107.207,126.963)
C5: (22.898,106.893,126.626)
O3': (17.136,109.007,125.434)
OP1: (20.611,104.619,133.495)
OP2: (20.515,102.164,132.689)
C3': (24.594,103.413,130.601)
C1': (24.205,105.627,129.888)
C5': (22.052,102.986,130.247)
O4': (23.268,104.813,129.213)
C8: (22.287,107.144,130.603)
O2': (25.899,105.285,131.552)
C6: (23.519,110.433,130.299)
C5: (23.170,109.071,130.371)
C4: (24.147,108.154,130.022)
P: (21.216,103.472,132.733)
C4': (23.388,103.435,129.667)
C2': (24.619,104.848,131.131)
C2: (25.602,109.747,129.586)
N1: (24.767,110.740,129.890)
N3: (25.397,108.431,129.619)
N6: (22.692,111.435,130.613)
N7: (21.998,108.423,130.738)
N9: (23.571,106.912,130.167)
O5': (21.563,103.936,131.239)
O3': (25.759,103.209,129.810)
Image (generated by PyMOL):
PyMOL image
show in jmol