Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0279:0349
Extra
PDB:
ATOM 1 O3' C A 278 60.808 127.810 -1.797 1.00 97.08 O
ATOM 2 P C A 279 59.716 128.268 -0.707 1.00 96.27 P
ATOM 3 OP1 C A 279 59.524 129.732 -0.856 1.00 95.79 O
ATOM 4 OP2 C A 279 60.117 127.715 0.612 1.00 96.66 O
ATOM 5 O5' C A 279 58.379 127.533 -1.172 1.00 94.82 O
ATOM 6 C5' C A 279 57.802 127.795 -2.467 1.00 92.17 C
ATOM 7 C4' C A 279 56.595 126.913 -2.695 1.00 90.92 C
ATOM 8 O4' C A 279 57.006 125.521 -2.709 1.00 90.37 O
ATOM 9 C3' C A 279 55.513 126.976 -1.628 1.00 90.21 C
ATOM 10 O3' C A 279 54.633 128.077 -1.849 1.00 89.83 O
ATOM 11 C2' C A 279 54.801 125.640 -1.806 1.00 89.98 C
ATOM 12 O2' C A 279 53.862 125.655 -2.862 1.00 89.56 O
ATOM 13 C1' C A 279 55.967 124.716 -2.176 1.00 89.77 C
ATOM 14 N1 C A 279 56.505 123.917 -1.056 1.00 89.39 N
ATOM 15 C2 C A 279 55.790 122.784 -0.623 1.00 88.82 C
ATOM 16 O2 C A 279 54.710 122.501 -1.169 1.00 88.93 O
ATOM 17 N3 C A 279 56.294 122.031 0.381 1.00 88.93 N
ATOM 18 C4 C A 279 57.451 122.368 0.955 1.00 89.25 C
ATOM 19 N4 C A 279 57.914 121.586 1.936 1.00 89.13 N
ATOM 20 C5 C A 279 58.189 123.521 0.548 1.00 89.01 C
ATOM 21 C6 C A 279 57.684 124.259 -0.450 1.00 89.33 C
ATOM 22 P G A 280 54.024 128.882 -0.598 1.00 89.61 P
ATOM 23 OP1 G A 280 53.101 129.917 -1.138 1.00 88.73 O
ATOM 24 OP2 G A 280 55.152 129.290 0.278 1.00 89.37 O
ATOM 25 O5' G A 280 53.153 127.796 0.180 1.00 90.43 O
TER
ATOM 1 O3' A B 348 53.265 113.048 4.496 1.00 99.08 O
ATOM 2 P C B 349 53.960 112.713 3.088 1.00101.67 P
ATOM 3 OP1 C B 349 53.903 111.237 2.912 1.00101.72 O
ATOM 4 OP2 C B 349 55.274 113.409 3.054 1.00101.71 O
ATOM 5 O5' C B 349 53.002 113.388 2.006 1.00101.71 O
ATOM 6 C5' C B 349 51.652 112.922 1.820 1.00103.22 C
ATOM 7 C4' C B 349 50.877 113.883 0.947 1.00104.40 C
ATOM 8 O4' C B 349 50.842 115.190 1.584 1.00104.60 O
ATOM 9 C3' C B 349 51.464 114.166 -0.426 1.00105.10 C
ATOM 10 O3' C B 349 51.156 113.139 -1.368 1.00106.73 O
ATOM 11 C2' C B 349 50.824 115.507 -0.770 1.00104.44 C
ATOM 12 O2' C B 349 49.474 115.393 -1.177 1.00103.46 O
ATOM 13 C1' C B 349 50.866 116.207 0.590 1.00104.05 C
ATOM 14 N1 C B 349 52.080 117.033 0.785 1.00103.46 N
ATOM 15 C2 C B 349 52.038 118.396 0.433 1.00103.13 C
ATOM 16 O2 C B 349 50.984 118.873 -0.025 1.00102.55 O
ATOM 17 N3 C B 349 53.148 119.156 0.603 1.00102.77 N
ATOM 18 C4 C B 349 54.262 118.611 1.103 1.00102.77 C
ATOM 19 N4 C B 349 55.330 119.400 1.258 1.00101.88 N
ATOM 20 C5 C B 349 54.331 117.233 1.468 1.00102.77 C
ATOM 21 C6 C B 349 53.230 116.489 1.294 1.00102.95 C
ATOM 22 P G B 350 52.244 112.718 -2.482 1.00107.63 P
ATOM 23 OP1 G B 350 51.614 111.664 -3.325 1.00108.00 O
ATOM 24 OP2 G B 350 53.542 112.434 -1.802 1.00106.47 O
ATOM 25 O5' G B 350 52.411 114.030 -3.377 1.00107.31 O
TER
ATOM 2 P C A 279 59.716 128.268 -0.707 1.00 96.27 P
ATOM 3 OP1 C A 279 59.524 129.732 -0.856 1.00 95.79 O
ATOM 4 OP2 C A 279 60.117 127.715 0.612 1.00 96.66 O
ATOM 5 O5' C A 279 58.379 127.533 -1.172 1.00 94.82 O
ATOM 6 C5' C A 279 57.802 127.795 -2.467 1.00 92.17 C
ATOM 7 C4' C A 279 56.595 126.913 -2.695 1.00 90.92 C
ATOM 8 O4' C A 279 57.006 125.521 -2.709 1.00 90.37 O
ATOM 9 C3' C A 279 55.513 126.976 -1.628 1.00 90.21 C
ATOM 10 O3' C A 279 54.633 128.077 -1.849 1.00 89.83 O
ATOM 11 C2' C A 279 54.801 125.640 -1.806 1.00 89.98 C
ATOM 12 O2' C A 279 53.862 125.655 -2.862 1.00 89.56 O
ATOM 13 C1' C A 279 55.967 124.716 -2.176 1.00 89.77 C
ATOM 14 N1 C A 279 56.505 123.917 -1.056 1.00 89.39 N
ATOM 15 C2 C A 279 55.790 122.784 -0.623 1.00 88.82 C
ATOM 16 O2 C A 279 54.710 122.501 -1.169 1.00 88.93 O
ATOM 17 N3 C A 279 56.294 122.031 0.381 1.00 88.93 N
ATOM 18 C4 C A 279 57.451 122.368 0.955 1.00 89.25 C
ATOM 19 N4 C A 279 57.914 121.586 1.936 1.00 89.13 N
ATOM 20 C5 C A 279 58.189 123.521 0.548 1.00 89.01 C
ATOM 21 C6 C A 279 57.684 124.259 -0.450 1.00 89.33 C
ATOM 22 P G A 280 54.024 128.882 -0.598 1.00 89.61 P
ATOM 23 OP1 G A 280 53.101 129.917 -1.138 1.00 88.73 O
ATOM 24 OP2 G A 280 55.152 129.290 0.278 1.00 89.37 O
ATOM 25 O5' G A 280 53.153 127.796 0.180 1.00 90.43 O
TER
ATOM 1 O3' A B 348 53.265 113.048 4.496 1.00 99.08 O
ATOM 2 P C B 349 53.960 112.713 3.088 1.00101.67 P
ATOM 3 OP1 C B 349 53.903 111.237 2.912 1.00101.72 O
ATOM 4 OP2 C B 349 55.274 113.409 3.054 1.00101.71 O
ATOM 5 O5' C B 349 53.002 113.388 2.006 1.00101.71 O
ATOM 6 C5' C B 349 51.652 112.922 1.820 1.00103.22 C
ATOM 7 C4' C B 349 50.877 113.883 0.947 1.00104.40 C
ATOM 8 O4' C B 349 50.842 115.190 1.584 1.00104.60 O
ATOM 9 C3' C B 349 51.464 114.166 -0.426 1.00105.10 C
ATOM 10 O3' C B 349 51.156 113.139 -1.368 1.00106.73 O
ATOM 11 C2' C B 349 50.824 115.507 -0.770 1.00104.44 C
ATOM 12 O2' C B 349 49.474 115.393 -1.177 1.00103.46 O
ATOM 13 C1' C B 349 50.866 116.207 0.590 1.00104.05 C
ATOM 14 N1 C B 349 52.080 117.033 0.785 1.00103.46 N
ATOM 15 C2 C B 349 52.038 118.396 0.433 1.00103.13 C
ATOM 16 O2 C B 349 50.984 118.873 -0.025 1.00102.55 O
ATOM 17 N3 C B 349 53.148 119.156 0.603 1.00102.77 N
ATOM 18 C4 C B 349 54.262 118.611 1.103 1.00102.77 C
ATOM 19 N4 C B 349 55.330 119.400 1.258 1.00101.88 N
ATOM 20 C5 C B 349 54.331 117.233 1.468 1.00102.77 C
ATOM 21 C6 C B 349 53.230 116.489 1.294 1.00102.95 C
ATOM 22 P G B 350 52.244 112.718 -2.482 1.00107.63 P
ATOM 23 OP1 G B 350 51.614 111.664 -3.325 1.00108.00 O
ATOM 24 OP2 G B 350 53.542 112.434 -1.802 1.00106.47 O
ATOM 25 O5' G B 350 52.411 114.030 -3.377 1.00107.31 O
TER
Atoms:
C2: (55.790,122.784,-0.623)
OP1: (59.524,129.732,-0.856)
OP2: (60.117,127.715,0.612)
C4: (57.451,122.368,0.955)
O5': (58.379,127.533,-1.172)
C3': (55.513,126.976,-1.628)
C1': (55.967,124.716,-2.176)
O4': (57.006,125.521,-2.709)
C5': (57.802,127.795,-2.467)
P: (59.716,128.268,-0.707)
O2: (54.710,122.501,-1.169)
C4': (56.595,126.913,-2.695)
C2': (54.801,125.640,-1.806)
O2': (53.862,125.655,-2.862)
N1: (56.505,123.917,-1.056)
N3: (56.294,122.031,0.381)
N4: (57.914,121.586,1.936)
C6: (57.684,124.259,-0.450)
C5: (58.189,123.521,0.548)
O3': (54.633,128.077,-1.849)
OP1: (59.524,129.732,-0.856)
OP2: (60.117,127.715,0.612)
C4: (57.451,122.368,0.955)
O5': (58.379,127.533,-1.172)
C3': (55.513,126.976,-1.628)
C1': (55.967,124.716,-2.176)
O4': (57.006,125.521,-2.709)
C5': (57.802,127.795,-2.467)
P: (59.716,128.268,-0.707)
O2: (54.710,122.501,-1.169)
C4': (56.595,126.913,-2.695)
C2': (54.801,125.640,-1.806)
O2': (53.862,125.655,-2.862)
N1: (56.505,123.917,-1.056)
N3: (56.294,122.031,0.381)
N4: (57.914,121.586,1.936)
C6: (57.684,124.259,-0.450)
C5: (58.189,123.521,0.548)
O3': (54.633,128.077,-1.849)
C2: (52.038,118.396,0.433)
OP1: (53.903,111.237,2.912)
OP2: (55.274,113.409,3.054)
C4: (54.262,118.611,1.103)
O5': (53.002,113.388,2.006)
C3': (51.464,114.166,-0.426)
C1': (50.866,116.207,0.590)
O4': (50.842,115.190,1.584)
C5': (51.652,112.922,1.820)
P: (53.960,112.713,3.088)
O2: (50.984,118.873,-0.025)
C4': (50.877,113.883,0.947)
C2': (50.824,115.507,-0.770)
O2': (49.474,115.393,-1.177)
N1: (52.080,117.033,0.785)
N3: (53.148,119.156,0.603)
N4: (55.330,119.400,1.258)
C6: (53.230,116.489,1.294)
C5: (54.331,117.233,1.468)
O3': (51.156,113.139,-1.368)
OP1: (53.903,111.237,2.912)
OP2: (55.274,113.409,3.054)
C4: (54.262,118.611,1.103)
O5': (53.002,113.388,2.006)
C3': (51.464,114.166,-0.426)
C1': (50.866,116.207,0.590)
O4': (50.842,115.190,1.584)
C5': (51.652,112.922,1.820)
P: (53.960,112.713,3.088)
O2: (50.984,118.873,-0.025)
C4': (50.877,113.883,0.947)
C2': (50.824,115.507,-0.770)
O2': (49.474,115.393,-1.177)
N1: (52.080,117.033,0.785)
N3: (53.148,119.156,0.603)
N4: (55.330,119.400,1.258)
C6: (53.230,116.489,1.294)
C5: (54.331,117.233,1.468)
O3': (51.156,113.139,-1.368)
Image (generated by PyMOL):