Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0293:0333
Extra
PDB:
ATOM 1 O3' G A 292 18.267 137.520 18.791 1.00 61.91 O
ATOM 2 P A A 293 17.350 138.497 19.676 1.00 62.72 P
ATOM 3 OP1 A A 293 17.083 139.716 18.873 1.00 61.41 O
ATOM 4 OP2 A A 293 17.958 138.627 21.025 1.00 63.04 O
ATOM 5 O5' A A 293 15.984 137.695 19.824 1.00 60.45 O
ATOM 6 C5' A A 293 15.410 136.999 18.705 1.00 59.79 C
ATOM 7 C4' A A 293 14.519 135.888 19.195 1.00 59.30 C
ATOM 8 O4' A A 293 15.325 134.857 19.812 1.00 60.59 O
ATOM 9 C3' A A 293 13.528 136.308 20.265 1.00 58.43 C
ATOM 10 O3' A A 293 12.364 136.837 19.646 1.00 56.72 O
ATOM 11 C2' A A 293 13.264 135.007 21.016 1.00 59.59 C
ATOM 12 O2' A A 293 12.298 134.192 20.390 1.00 58.68 O
ATOM 13 C1' A A 293 14.629 134.314 20.921 1.00 61.93 C
ATOM 14 N9 A A 293 15.498 134.403 22.098 1.00 63.48 N
ATOM 15 C8 A A 293 16.255 135.468 22.522 1.00 64.03 C
ATOM 16 N7 A A 293 16.972 135.217 23.588 1.00 63.92 N
ATOM 17 C5 A A 293 16.659 133.902 23.896 1.00 65.41 C
ATOM 18 C6 A A 293 17.098 133.039 24.915 1.00 66.36 C
ATOM 19 N6 A A 293 17.992 133.382 25.847 1.00 65.37 N
ATOM 20 N1 A A 293 16.584 131.790 24.941 1.00 66.19 N
ATOM 21 C2 A A 293 15.697 131.442 24.002 1.00 65.50 C
ATOM 22 N3 A A 293 15.214 132.158 22.993 1.00 64.43 N
ATOM 23 C4 A A 293 15.742 133.393 22.995 1.00 64.26 C
ATOM 24 P A A 294 11.693 138.177 20.213 1.00 56.92 P
ATOM 25 OP1 A A 294 10.682 138.622 19.224 1.00 58.51 O
ATOM 26 OP2 A A 294 12.765 139.117 20.642 1.00 57.32 O
ATOM 27 O5' A A 294 10.897 137.678 21.489 1.00 53.71 O
TER
ATOM 1 O3' C B 332 26.211 141.725 27.075 1.00 41.90 O
ATOM 2 P G B 333 26.416 140.711 25.855 1.00 43.43 P
ATOM 3 OP1 G B 333 27.344 141.354 24.894 1.00 45.26 O
ATOM 4 OP2 G B 333 25.084 140.243 25.398 1.00 42.03 O
ATOM 5 O5' G B 333 27.190 139.483 26.502 1.00 45.12 O
ATOM 6 C5' G B 333 26.964 138.134 26.055 1.00 44.22 C
ATOM 7 C4' G B 333 26.822 137.218 27.248 1.00 44.98 C
ATOM 8 O4' G B 333 25.696 137.650 28.059 1.00 45.01 O
ATOM 9 C3' G B 333 26.545 135.758 26.938 1.00 43.40 C
ATOM 10 O3' G B 333 27.769 135.078 26.701 1.00 42.78 O
ATOM 11 C2' G B 333 25.869 135.291 28.219 1.00 44.94 C
ATOM 12 O2' G B 333 26.807 135.083 29.258 1.00 42.34 O
ATOM 13 C1' G B 333 25.024 136.520 28.582 1.00 46.57 C
ATOM 14 N9 G B 333 23.656 136.534 28.059 1.00 49.67 N
ATOM 15 C8 G B 333 23.071 137.540 27.325 1.00 50.29 C
ATOM 16 N7 G B 333 21.827 137.298 27.018 1.00 51.22 N
ATOM 17 C5 G B 333 21.570 136.054 27.578 1.00 52.66 C
ATOM 18 C6 G B 333 20.380 135.274 27.581 1.00 53.16 C
ATOM 19 O6 G B 333 19.281 135.539 27.083 1.00 53.24 O
ATOM 20 N1 G B 333 20.559 134.074 28.257 1.00 53.34 N
ATOM 21 C2 G B 333 21.727 133.672 28.854 1.00 53.37 C
ATOM 22 N2 G B 333 21.700 132.473 29.451 1.00 54.36 N
ATOM 23 N3 G B 333 22.839 134.390 28.865 1.00 52.09 N
ATOM 24 C4 G B 333 22.691 135.562 28.215 1.00 51.06 C
ATOM 25 P U B 334 27.834 133.890 25.626 1.00 45.21 P
ATOM 26 OP1 U B 334 29.163 133.244 25.732 1.00 46.73 O
ATOM 27 OP2 U B 334 27.386 134.415 24.313 1.00 46.13 O
ATOM 28 O5' U B 334 26.745 132.855 26.145 1.00 47.16 O
TER
ATOM 2 P A A 293 17.350 138.497 19.676 1.00 62.72 P
ATOM 3 OP1 A A 293 17.083 139.716 18.873 1.00 61.41 O
ATOM 4 OP2 A A 293 17.958 138.627 21.025 1.00 63.04 O
ATOM 5 O5' A A 293 15.984 137.695 19.824 1.00 60.45 O
ATOM 6 C5' A A 293 15.410 136.999 18.705 1.00 59.79 C
ATOM 7 C4' A A 293 14.519 135.888 19.195 1.00 59.30 C
ATOM 8 O4' A A 293 15.325 134.857 19.812 1.00 60.59 O
ATOM 9 C3' A A 293 13.528 136.308 20.265 1.00 58.43 C
ATOM 10 O3' A A 293 12.364 136.837 19.646 1.00 56.72 O
ATOM 11 C2' A A 293 13.264 135.007 21.016 1.00 59.59 C
ATOM 12 O2' A A 293 12.298 134.192 20.390 1.00 58.68 O
ATOM 13 C1' A A 293 14.629 134.314 20.921 1.00 61.93 C
ATOM 14 N9 A A 293 15.498 134.403 22.098 1.00 63.48 N
ATOM 15 C8 A A 293 16.255 135.468 22.522 1.00 64.03 C
ATOM 16 N7 A A 293 16.972 135.217 23.588 1.00 63.92 N
ATOM 17 C5 A A 293 16.659 133.902 23.896 1.00 65.41 C
ATOM 18 C6 A A 293 17.098 133.039 24.915 1.00 66.36 C
ATOM 19 N6 A A 293 17.992 133.382 25.847 1.00 65.37 N
ATOM 20 N1 A A 293 16.584 131.790 24.941 1.00 66.19 N
ATOM 21 C2 A A 293 15.697 131.442 24.002 1.00 65.50 C
ATOM 22 N3 A A 293 15.214 132.158 22.993 1.00 64.43 N
ATOM 23 C4 A A 293 15.742 133.393 22.995 1.00 64.26 C
ATOM 24 P A A 294 11.693 138.177 20.213 1.00 56.92 P
ATOM 25 OP1 A A 294 10.682 138.622 19.224 1.00 58.51 O
ATOM 26 OP2 A A 294 12.765 139.117 20.642 1.00 57.32 O
ATOM 27 O5' A A 294 10.897 137.678 21.489 1.00 53.71 O
TER
ATOM 1 O3' C B 332 26.211 141.725 27.075 1.00 41.90 O
ATOM 2 P G B 333 26.416 140.711 25.855 1.00 43.43 P
ATOM 3 OP1 G B 333 27.344 141.354 24.894 1.00 45.26 O
ATOM 4 OP2 G B 333 25.084 140.243 25.398 1.00 42.03 O
ATOM 5 O5' G B 333 27.190 139.483 26.502 1.00 45.12 O
ATOM 6 C5' G B 333 26.964 138.134 26.055 1.00 44.22 C
ATOM 7 C4' G B 333 26.822 137.218 27.248 1.00 44.98 C
ATOM 8 O4' G B 333 25.696 137.650 28.059 1.00 45.01 O
ATOM 9 C3' G B 333 26.545 135.758 26.938 1.00 43.40 C
ATOM 10 O3' G B 333 27.769 135.078 26.701 1.00 42.78 O
ATOM 11 C2' G B 333 25.869 135.291 28.219 1.00 44.94 C
ATOM 12 O2' G B 333 26.807 135.083 29.258 1.00 42.34 O
ATOM 13 C1' G B 333 25.024 136.520 28.582 1.00 46.57 C
ATOM 14 N9 G B 333 23.656 136.534 28.059 1.00 49.67 N
ATOM 15 C8 G B 333 23.071 137.540 27.325 1.00 50.29 C
ATOM 16 N7 G B 333 21.827 137.298 27.018 1.00 51.22 N
ATOM 17 C5 G B 333 21.570 136.054 27.578 1.00 52.66 C
ATOM 18 C6 G B 333 20.380 135.274 27.581 1.00 53.16 C
ATOM 19 O6 G B 333 19.281 135.539 27.083 1.00 53.24 O
ATOM 20 N1 G B 333 20.559 134.074 28.257 1.00 53.34 N
ATOM 21 C2 G B 333 21.727 133.672 28.854 1.00 53.37 C
ATOM 22 N2 G B 333 21.700 132.473 29.451 1.00 54.36 N
ATOM 23 N3 G B 333 22.839 134.390 28.865 1.00 52.09 N
ATOM 24 C4 G B 333 22.691 135.562 28.215 1.00 51.06 C
ATOM 25 P U B 334 27.834 133.890 25.626 1.00 45.21 P
ATOM 26 OP1 U B 334 29.163 133.244 25.732 1.00 46.73 O
ATOM 27 OP2 U B 334 27.386 134.415 24.313 1.00 46.13 O
ATOM 28 O5' U B 334 26.745 132.855 26.145 1.00 47.16 O
TER
Atoms:
OP1: (17.083,139.716,18.873)
OP2: (17.958,138.627,21.025)
C3': (13.528,136.308,20.265)
C1': (14.629,134.314,20.921)
C5': (15.410,136.999,18.705)
O4': (15.325,134.857,19.812)
C8: (16.255,135.468,22.522)
O2': (12.298,134.192,20.390)
C6: (17.098,133.039,24.915)
C5: (16.659,133.902,23.896)
C4: (15.742,133.393,22.995)
P: (17.350,138.497,19.676)
C4': (14.519,135.888,19.195)
C2': (13.264,135.007,21.016)
C2: (15.697,131.442,24.002)
N1: (16.584,131.790,24.941)
N3: (15.214,132.158,22.993)
N6: (17.992,133.382,25.847)
N7: (16.972,135.217,23.588)
N9: (15.498,134.403,22.098)
O5': (15.984,137.695,19.824)
O3': (12.364,136.837,19.646)
OP2: (17.958,138.627,21.025)
C3': (13.528,136.308,20.265)
C1': (14.629,134.314,20.921)
C5': (15.410,136.999,18.705)
O4': (15.325,134.857,19.812)
C8: (16.255,135.468,22.522)
O2': (12.298,134.192,20.390)
C6: (17.098,133.039,24.915)
C5: (16.659,133.902,23.896)
C4: (15.742,133.393,22.995)
P: (17.350,138.497,19.676)
C4': (14.519,135.888,19.195)
C2': (13.264,135.007,21.016)
C2: (15.697,131.442,24.002)
N1: (16.584,131.790,24.941)
N3: (15.214,132.158,22.993)
N6: (17.992,133.382,25.847)
N7: (16.972,135.217,23.588)
N9: (15.498,134.403,22.098)
O5': (15.984,137.695,19.824)
O3': (12.364,136.837,19.646)
OP1: (27.344,141.354,24.894)
OP2: (25.084,140.243,25.398)
C3': (26.545,135.758,26.938)
C1': (25.024,136.520,28.582)
C5': (26.964,138.134,26.055)
O6: (19.281,135.539,27.083)
O4': (25.696,137.650,28.059)
C8: (23.071,137.540,27.325)
C2: (21.727,133.672,28.854)
C6: (20.380,135.274,27.581)
C5: (21.570,136.054,27.578)
C4: (22.691,135.562,28.215)
P: (26.416,140.711,25.855)
C4': (26.822,137.218,27.248)
C2': (25.869,135.291,28.219)
O2': (26.807,135.083,29.258)
N1: (20.559,134.074,28.257)
N2: (21.700,132.473,29.451)
N3: (22.839,134.390,28.865)
N7: (21.827,137.298,27.018)
N9: (23.656,136.534,28.059)
O5': (27.190,139.483,26.502)
O3': (27.769,135.078,26.701)
OP2: (25.084,140.243,25.398)
C3': (26.545,135.758,26.938)
C1': (25.024,136.520,28.582)
C5': (26.964,138.134,26.055)
O6: (19.281,135.539,27.083)
O4': (25.696,137.650,28.059)
C8: (23.071,137.540,27.325)
C2: (21.727,133.672,28.854)
C6: (20.380,135.274,27.581)
C5: (21.570,136.054,27.578)
C4: (22.691,135.562,28.215)
P: (26.416,140.711,25.855)
C4': (26.822,137.218,27.248)
C2': (25.869,135.291,28.219)
O2': (26.807,135.083,29.258)
N1: (20.559,134.074,28.257)
N2: (21.700,132.473,29.451)
N3: (22.839,134.390,28.865)
N7: (21.827,137.298,27.018)
N9: (23.656,136.534,28.059)
O5': (27.190,139.483,26.502)
O3': (27.769,135.078,26.701)
Image (generated by PyMOL):