ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1963:A1964

Extra

PDB:
ATOM 1 O3' U A1962 114.702 132.583 105.925 1.00 72.84 O
ATOM 2 P U A1963 113.563 133.626 106.351 1.00 72.78 P
ATOM 3 OP1 U A1963 113.886 134.063 107.727 1.00 72.75 O
ATOM 4 OP2 U A1963 112.250 132.972 106.079 1.00 73.98 O
ATOM 5 O5' U A1963 113.775 134.844 105.336 1.00 71.43 O
ATOM 6 C5' U A1963 115.045 135.553 105.259 1.00 67.81 C
ATOM 7 C4' U A1963 115.133 136.380 103.982 1.00 64.82 C
ATOM 8 O4' U A1963 115.115 135.474 102.846 1.00 64.87 O
ATOM 9 C3' U A1963 114.050 137.412 103.671 1.00 63.11 C
ATOM 10 O3' U A1963 114.186 138.659 104.400 1.00 59.62 O
ATOM 11 C2' U A1963 114.140 137.529 102.140 1.00 63.89 C
ATOM 12 O2' U A1963 115.135 138.402 101.647 1.00 63.45 O
ATOM 13 C1' U A1963 114.515 136.102 101.727 1.00 64.31 C
ATOM 14 N1 U A1963 113.385 135.272 101.254 1.00 65.26 N
ATOM 15 C2 U A1963 113.060 135.317 99.900 1.00 65.36 C
ATOM 16 O2 U A1963 113.661 135.996 99.097 1.00 64.61 O
ATOM 17 N3 U A1963 111.993 134.530 99.523 1.00 66.51 N
ATOM 18 C4 U A1963 111.224 133.716 100.331 1.00 67.22 C
ATOM 19 O4 U A1963 110.194 133.216 99.874 1.00 68.04 O
ATOM 20 C5 U A1963 111.624 133.702 101.710 1.00 67.16 C
ATOM 21 C6 U A1963 112.659 134.465 102.117 1.00 66.03 C
ATOM 22 P A A1964 112.860 139.431 104.969 1.00 56.36 P
ATOM 23 OP1 A A1964 112.826 139.416 106.446 1.00 54.62 O
ATOM 24 OP2 A A1964 111.657 138.985 104.215 1.00 58.76 O
ATOM 25 O5' A A1964 113.095 140.950 104.555 1.00 55.35 O
TER

ATOM 1 O3' U B1963 114.186 138.659 104.400 1.00 59.62 O
ATOM 2 P A B1964 112.860 139.431 104.969 1.00 56.36 P
ATOM 3 OP1 A B1964 112.826 139.416 106.446 1.00 54.62 O
ATOM 4 OP2 A B1964 111.657 138.985 104.215 1.00 58.76 O
ATOM 5 O5' A B1964 113.095 140.950 104.555 1.00 55.35 O
ATOM 6 C5' A B1964 114.211 141.706 105.068 1.00 52.73 C
ATOM 7 C4' A B1964 114.682 142.710 104.037 1.00 48.92 C
ATOM 8 O4' A B1964 115.317 142.030 102.918 1.00 48.91 O
ATOM 9 C3' A B1964 113.606 143.563 103.394 1.00 47.96 C
ATOM 10 O3' A B1964 113.233 144.668 104.190 1.00 47.67 O
ATOM 11 C2' A B1964 114.257 144.000 102.091 1.00 48.22 C
ATOM 12 O2' A B1964 115.064 145.149 102.262 1.00 46.63 O
ATOM 13 C1' A B1964 115.087 142.765 101.725 1.00 48.68 C
ATOM 14 N9 A B1964 114.365 141.917 100.774 1.00 49.23 N
ATOM 15 C8 A B1964 113.659 140.768 101.031 1.00 50.09 C
ATOM 16 N7 A B1964 113.070 140.263 99.978 1.00 50.77 N
ATOM 17 C5 A B1964 113.413 141.131 98.957 1.00 50.92 C
ATOM 18 C6 A B1964 113.085 141.148 97.590 1.00 52.12 C
ATOM 19 N6 A B1964 112.288 140.240 97.009 1.00 52.58 N
ATOM 20 N1 A B1964 113.600 142.139 96.833 1.00 51.35 N
ATOM 21 C2 A B1964 114.383 143.046 97.426 1.00 50.61 C
ATOM 22 N3 A B1964 114.754 143.141 98.706 1.00 49.78 N
ATOM 23 C4 A B1964 114.226 142.143 99.427 1.00 49.88 C
ATOM 24 P A B1965 111.713 145.203 104.137 1.00 48.31 P
ATOM 25 OP1 A B1965 111.562 146.472 104.894 1.00 49.21 O
ATOM 26 OP2 A B1965 110.871 144.039 104.496 1.00 48.45 O
ATOM 27 O5' A B1965 111.498 145.592 102.608 1.00 46.96 O
TER

Atoms:
C4: (111.224,133.716,100.331)
N3: (111.993,134.530,99.523)
OP1: (113.886,134.063,107.727)
OP2: (112.250,132.972,106.079)
C2: (113.060,135.317,99.900)
C1': (114.515,136.102,101.727)
C3': (114.050,137.412,103.671)
O5': (113.775,134.844,105.336)
O4': (115.115,135.474,102.846)
C5': (115.045,135.553,105.259)
P: (113.563,133.626,106.351)
C4': (115.133,136.380,103.982)
C2': (114.140,137.529,102.140)
O2': (115.135,138.402,101.647)
N1: (113.385,135.272,101.254)
O4: (110.194,133.216,99.874)
O2: (113.661,135.996,99.097)
C6: (112.659,134.465,102.117)
C5: (111.624,133.702,101.710)
O3': (114.186,138.659,104.400)
OP1: (112.826,139.416,106.446)
OP2: (111.657,138.985,104.215)
C3': (113.606,143.563,103.394)
C1': (115.087,142.765,101.725)
C5': (114.211,141.706,105.068)
O4': (115.317,142.030,102.918)
C8: (113.659,140.768,101.031)
O2': (115.064,145.149,102.262)
C6: (113.085,141.148,97.590)
C5: (113.413,141.131,98.957)
C4: (114.226,142.143,99.427)
P: (112.860,139.431,104.969)
C4': (114.682,142.710,104.037)
C2': (114.257,144.000,102.091)
C2: (114.383,143.046,97.426)
N1: (113.600,142.139,96.833)
N3: (114.754,143.141,98.706)
N6: (112.288,140.240,97.009)
N7: (113.070,140.263,99.978)
N9: (114.365,141.917,100.774)
O5': (113.095,140.950,104.555)
O3': (113.233,144.668,104.190)
Image (generated by PyMOL):
PyMOL image
show in jmol