ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CME:0553:01052

Extra

PDB:
ATOM 1 O3' G A 552 -5.848 93.198 96.804 1.00 56.43 O
ATOM 2 P A A 553 -5.461 92.128 97.934 1.00 58.31 P
ATOM 3 OP1 A A 553 -6.168 90.851 97.617 1.00 56.59 O
ATOM 4 OP2 A A 553 -5.632 92.747 99.265 1.00 56.56 O
ATOM 5 O5' A A 553 -3.904 91.906 97.685 1.00 55.15 O
ATOM 6 C5' A A 553 -3.439 91.307 96.464 1.00 51.37 C
ATOM 7 C4' A A 553 -1.947 91.472 96.332 1.00 49.34 C
ATOM 8 O4' A A 553 -1.615 92.824 95.930 1.00 47.53 O
ATOM 9 C3' A A 553 -1.137 91.259 97.596 1.00 48.85 C
ATOM 10 O3' A A 553 -0.984 89.864 97.872 1.00 49.59 O
ATOM 11 C2' A A 553 0.172 91.960 97.244 1.00 47.07 C
ATOM 12 O2' A A 553 0.990 91.176 96.393 1.00 46.06 O
ATOM 13 C1' A A 553 -0.337 93.161 96.440 1.00 45.99 C
ATOM 14 N9 A A 553 -0.444 94.426 97.170 1.00 45.46 N
ATOM 15 C8 A A 553 -1.579 95.017 97.676 1.00 45.96 C
ATOM 16 N7 A A 553 -1.363 96.183 98.241 1.00 45.14 N
ATOM 17 C5 A A 553 0.006 96.368 98.110 1.00 45.06 C
ATOM 18 C6 A A 553 0.857 97.412 98.498 1.00 43.97 C
ATOM 19 N6 A A 553 0.440 98.504 99.126 1.00 44.53 N
ATOM 20 N1 A A 553 2.169 97.294 98.214 1.00 44.15 N
ATOM 21 C2 A A 553 2.591 96.191 97.582 1.00 44.86 C
ATOM 22 N3 A A 553 1.892 95.139 97.167 1.00 45.05 N
ATOM 23 C4 A A 553 0.588 95.289 97.463 1.00 45.51 C
ATOM 24 P A A 554 -0.973 89.341 99.395 1.00 50.28 P
ATOM 25 OP1 A A 554 -1.114 87.860 99.347 1.00 46.49 O
ATOM 26 OP2 A A 554 -1.921 90.162 100.217 1.00 48.63 O
ATOM 27 O5' A A 554 0.489 89.690 99.912 1.00 47.78 O
TER

ATOM 1 O3' A B1051 5.701 104.476 97.234 1.00 40.59 O
ATOM 2 P G B1052 6.193 104.424 98.761 1.00 42.41 P
ATOM 3 OP1 G B1052 5.556 105.580 99.449 1.00 41.31 O
ATOM 4 OP2 G B1052 7.676 104.294 98.771 1.00 40.39 O
ATOM 5 O5' G B1052 5.556 103.072 99.327 1.00 40.40 O
ATOM 6 C5' G B1052 4.158 103.006 99.676 1.00 38.94 C
ATOM 7 C4' G B1052 3.777 101.612 100.107 1.00 37.56 C
ATOM 8 O4' G B1052 4.107 100.687 99.045 1.00 37.59 O
ATOM 9 C3' G B1052 4.478 101.030 101.323 1.00 38.55 C
ATOM 10 O3' G B1052 3.868 101.443 102.547 1.00 39.61 O
ATOM 11 C2' G B1052 4.266 99.541 101.111 1.00 38.55 C
ATOM 12 O2' G B1052 2.938 99.188 101.438 1.00 39.09 O
ATOM 13 C1' G B1052 4.449 99.423 99.597 1.00 37.80 C
ATOM 14 N9 G B1052 5.814 99.086 99.190 1.00 36.19 N
ATOM 15 C8 G B1052 6.779 99.955 98.736 1.00 35.82 C
ATOM 16 N7 G B1052 7.910 99.367 98.452 1.00 34.01 N
ATOM 17 C5 G B1052 7.682 98.027 98.731 1.00 33.22 C
ATOM 18 C6 G B1052 8.552 96.901 98.620 1.00 31.48 C
ATOM 19 O6 G B1052 9.731 96.867 98.251 1.00 26.99 O
ATOM 20 N1 G B1052 7.913 95.728 99.002 1.00 32.46 N
ATOM 21 C2 G B1052 6.612 95.644 99.446 1.00 34.01 C
ATOM 22 N2 G B1052 6.179 94.421 99.769 1.00 32.93 N
ATOM 23 N3 G B1052 5.796 96.684 99.561 1.00 34.55 N
ATOM 24 C4 G B1052 6.391 97.835 99.187 1.00 34.46 C
ATOM 25 P G B1053 4.707 101.377 103.925 1.00 40.59 P
ATOM 26 OP1 G B1053 3.757 101.746 105.015 1.00 39.35 O
ATOM 27 OP2 G B1053 5.954 102.162 103.750 1.00 41.46 O
ATOM 28 O5' G B1053 5.135 99.842 104.077 1.00 38.98 O
TER

Atoms:
OP1: (-6.168,90.851,97.617)
OP2: (-5.632,92.747,99.265)
C3': (-1.137,91.259,97.596)
C1': (-0.337,93.161,96.440)
C5': (-3.439,91.307,96.464)
O4': (-1.615,92.824,95.930)
C8: (-1.579,95.017,97.676)
O2': (0.990,91.176,96.393)
C6: (0.857,97.412,98.498)
C5: (0.006,96.368,98.110)
C4: (0.588,95.289,97.463)
P: (-5.461,92.128,97.934)
C4': (-1.947,91.472,96.332)
C2': (0.172,91.960,97.244)
C2: (2.591,96.191,97.582)
N1: (2.169,97.294,98.214)
N3: (1.892,95.139,97.167)
N6: (0.440,98.504,99.126)
N7: (-1.363,96.183,98.241)
N9: (-0.444,94.426,97.170)
O5': (-3.904,91.906,97.685)
O3': (-0.984,89.864,97.872)
OP1: (5.556,105.580,99.449)
OP2: (7.676,104.294,98.771)
C3': (4.478,101.030,101.323)
C1': (4.449,99.423,99.597)
C5': (4.158,103.006,99.676)
O6: (9.731,96.867,98.251)
O4': (4.107,100.687,99.045)
C8: (6.779,99.955,98.736)
C2: (6.612,95.644,99.446)
C6: (8.552,96.901,98.620)
C5: (7.682,98.027,98.731)
C4: (6.391,97.835,99.187)
P: (6.193,104.424,98.761)
C4': (3.777,101.612,100.107)
C2': (4.266,99.541,101.111)
O2': (2.938,99.188,101.438)
N1: (7.913,95.728,99.002)
N2: (6.179,94.421,99.769)
N3: (5.796,96.684,99.561)
N7: (7.910,99.367,98.452)
N9: (5.814,99.086,99.190)
O5': (5.556,103.072,99.327)
O3': (3.868,101.443,102.547)
Image (generated by PyMOL):
PyMOL image
show in jmol