Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A161:A163
Extra
PDB:
ATOM 1 O3' U A 160 68.594 103.246 53.134 1.00 34.61 O
ATOM 2 P C A 161 68.418 104.483 52.129 1.00 34.22 P
ATOM 3 OP1 C A 161 67.157 104.352 51.343 1.00 33.00 O
ATOM 4 OP2 C A 161 69.696 104.662 51.419 1.00 35.24 O
ATOM 5 O5' C A 161 68.172 105.673 53.135 1.00 33.19 O
ATOM 6 C5' C A 161 66.902 105.803 53.760 1.00 34.15 C
ATOM 7 C4' C A 161 66.921 106.990 54.669 1.00 35.99 C
ATOM 8 O4' C A 161 67.930 106.807 55.690 1.00 35.80 O
ATOM 9 C3' C A 161 67.345 108.261 53.965 1.00 35.71 C
ATOM 10 O3' C A 161 66.215 108.806 53.334 1.00 34.64 O
ATOM 11 C2' C A 161 67.822 109.110 55.120 1.00 36.84 C
ATOM 12 O2' C A 161 66.695 109.602 55.800 1.00 38.34 O
ATOM 13 C1' C A 161 68.504 108.054 55.994 1.00 36.46 C
ATOM 14 N1 C A 161 69.951 107.941 55.812 1.00 36.98 N
ATOM 15 C2 C A 161 70.762 108.586 56.722 1.00 38.39 C
ATOM 16 O2 C A 161 70.224 109.248 57.631 1.00 37.54 O
ATOM 17 N3 C A 161 72.109 108.484 56.597 1.00 38.99 N
ATOM 18 C4 C A 161 72.636 107.768 55.597 1.00 38.80 C
ATOM 19 N4 C A 161 73.963 107.680 55.518 1.00 38.86 N
ATOM 20 C5 C A 161 71.826 107.107 54.641 1.00 38.08 C
ATOM 21 C6 C A 161 70.497 107.216 54.785 1.00 38.42 C
ATOM 22 P A A 162 66.401 109.704 52.045 1.00 35.13 P
ATOM 23 OP1 A A 162 67.248 110.828 52.500 1.00 37.71 O
ATOM 24 OP2 A A 162 65.081 109.976 51.418 1.00 36.23 O
ATOM 25 O5' A A 162 67.215 108.770 51.065 1.00 35.99 O
TER
ATOM 1 O3' A B 162 70.126 107.277 48.314 1.00 40.37 O
ATOM 2 P G B 163 69.854 106.205 47.152 1.00 39.90 P
ATOM 3 OP1 G B 163 68.523 106.453 46.543 1.00 38.38 O
ATOM 4 OP2 G B 163 70.174 104.865 47.701 1.00 39.36 O
ATOM 5 O5' G B 163 70.960 106.595 46.074 1.00 41.80 O
ATOM 6 C5' G B 163 70.768 107.714 45.179 1.00 42.69 C
ATOM 7 C4' G B 163 71.248 109.000 45.828 1.00 43.13 C
ATOM 8 O4' G B 163 72.659 108.846 46.172 1.00 44.30 O
ATOM 9 C3' G B 163 71.188 110.282 44.978 1.00 42.95 C
ATOM 10 O3' G B 163 70.805 111.374 45.822 1.00 42.53 O
ATOM 11 C2' G B 163 72.645 110.463 44.560 1.00 43.62 C
ATOM 12 O2' G B 163 73.016 111.772 44.225 1.00 43.92 O
ATOM 13 C1' G B 163 73.325 110.044 45.845 1.00 44.52 C
ATOM 14 N9 G B 163 74.767 109.839 45.775 1.00 45.50 N
ATOM 15 C8 G B 163 75.496 109.166 44.820 1.00 46.25 C
ATOM 16 N7 G B 163 76.783 109.166 45.061 1.00 46.63 N
ATOM 17 C5 G B 163 76.908 109.880 46.248 1.00 48.43 C
ATOM 18 C6 G B 163 78.058 110.186 47.027 1.00 49.20 C
ATOM 19 O6 G B 163 79.226 109.860 46.822 1.00 51.24 O
ATOM 20 N1 G B 163 77.731 110.939 48.157 1.00 48.66 N
ATOM 21 C2 G B 163 76.463 111.337 48.498 1.00 47.95 C
ATOM 22 N2 G B 163 76.350 112.082 49.596 1.00 48.54 N
ATOM 23 N3 G B 163 75.381 111.034 47.800 1.00 47.46 N
ATOM 24 C4 G B 163 75.674 110.312 46.693 1.00 47.38 C
ATOM 25 P U B 164 70.383 112.790 45.175 1.00 42.64 P
ATOM 26 OP1 U B 164 69.613 112.549 43.937 1.00 44.68 O
ATOM 27 OP2 U B 164 71.546 113.721 45.131 1.00 43.18 O
ATOM 28 O5' U B 164 69.337 113.366 46.224 1.00 40.70 O
TER
ATOM 2 P C A 161 68.418 104.483 52.129 1.00 34.22 P
ATOM 3 OP1 C A 161 67.157 104.352 51.343 1.00 33.00 O
ATOM 4 OP2 C A 161 69.696 104.662 51.419 1.00 35.24 O
ATOM 5 O5' C A 161 68.172 105.673 53.135 1.00 33.19 O
ATOM 6 C5' C A 161 66.902 105.803 53.760 1.00 34.15 C
ATOM 7 C4' C A 161 66.921 106.990 54.669 1.00 35.99 C
ATOM 8 O4' C A 161 67.930 106.807 55.690 1.00 35.80 O
ATOM 9 C3' C A 161 67.345 108.261 53.965 1.00 35.71 C
ATOM 10 O3' C A 161 66.215 108.806 53.334 1.00 34.64 O
ATOM 11 C2' C A 161 67.822 109.110 55.120 1.00 36.84 C
ATOM 12 O2' C A 161 66.695 109.602 55.800 1.00 38.34 O
ATOM 13 C1' C A 161 68.504 108.054 55.994 1.00 36.46 C
ATOM 14 N1 C A 161 69.951 107.941 55.812 1.00 36.98 N
ATOM 15 C2 C A 161 70.762 108.586 56.722 1.00 38.39 C
ATOM 16 O2 C A 161 70.224 109.248 57.631 1.00 37.54 O
ATOM 17 N3 C A 161 72.109 108.484 56.597 1.00 38.99 N
ATOM 18 C4 C A 161 72.636 107.768 55.597 1.00 38.80 C
ATOM 19 N4 C A 161 73.963 107.680 55.518 1.00 38.86 N
ATOM 20 C5 C A 161 71.826 107.107 54.641 1.00 38.08 C
ATOM 21 C6 C A 161 70.497 107.216 54.785 1.00 38.42 C
ATOM 22 P A A 162 66.401 109.704 52.045 1.00 35.13 P
ATOM 23 OP1 A A 162 67.248 110.828 52.500 1.00 37.71 O
ATOM 24 OP2 A A 162 65.081 109.976 51.418 1.00 36.23 O
ATOM 25 O5' A A 162 67.215 108.770 51.065 1.00 35.99 O
TER
ATOM 1 O3' A B 162 70.126 107.277 48.314 1.00 40.37 O
ATOM 2 P G B 163 69.854 106.205 47.152 1.00 39.90 P
ATOM 3 OP1 G B 163 68.523 106.453 46.543 1.00 38.38 O
ATOM 4 OP2 G B 163 70.174 104.865 47.701 1.00 39.36 O
ATOM 5 O5' G B 163 70.960 106.595 46.074 1.00 41.80 O
ATOM 6 C5' G B 163 70.768 107.714 45.179 1.00 42.69 C
ATOM 7 C4' G B 163 71.248 109.000 45.828 1.00 43.13 C
ATOM 8 O4' G B 163 72.659 108.846 46.172 1.00 44.30 O
ATOM 9 C3' G B 163 71.188 110.282 44.978 1.00 42.95 C
ATOM 10 O3' G B 163 70.805 111.374 45.822 1.00 42.53 O
ATOM 11 C2' G B 163 72.645 110.463 44.560 1.00 43.62 C
ATOM 12 O2' G B 163 73.016 111.772 44.225 1.00 43.92 O
ATOM 13 C1' G B 163 73.325 110.044 45.845 1.00 44.52 C
ATOM 14 N9 G B 163 74.767 109.839 45.775 1.00 45.50 N
ATOM 15 C8 G B 163 75.496 109.166 44.820 1.00 46.25 C
ATOM 16 N7 G B 163 76.783 109.166 45.061 1.00 46.63 N
ATOM 17 C5 G B 163 76.908 109.880 46.248 1.00 48.43 C
ATOM 18 C6 G B 163 78.058 110.186 47.027 1.00 49.20 C
ATOM 19 O6 G B 163 79.226 109.860 46.822 1.00 51.24 O
ATOM 20 N1 G B 163 77.731 110.939 48.157 1.00 48.66 N
ATOM 21 C2 G B 163 76.463 111.337 48.498 1.00 47.95 C
ATOM 22 N2 G B 163 76.350 112.082 49.596 1.00 48.54 N
ATOM 23 N3 G B 163 75.381 111.034 47.800 1.00 47.46 N
ATOM 24 C4 G B 163 75.674 110.312 46.693 1.00 47.38 C
ATOM 25 P U B 164 70.383 112.790 45.175 1.00 42.64 P
ATOM 26 OP1 U B 164 69.613 112.549 43.937 1.00 44.68 O
ATOM 27 OP2 U B 164 71.546 113.721 45.131 1.00 43.18 O
ATOM 28 O5' U B 164 69.337 113.366 46.224 1.00 40.70 O
TER
Atoms:
C2: (70.762,108.586,56.722)
OP1: (67.157,104.352,51.343)
OP2: (69.696,104.662,51.419)
C4: (72.636,107.768,55.597)
O5': (68.172,105.673,53.135)
C3': (67.345,108.261,53.965)
C1': (68.504,108.054,55.994)
O4': (67.930,106.807,55.690)
C5': (66.902,105.803,53.760)
P: (68.418,104.483,52.129)
O2: (70.224,109.248,57.631)
C4': (66.921,106.990,54.669)
C2': (67.822,109.110,55.120)
O2': (66.695,109.602,55.800)
N1: (69.951,107.941,55.812)
N3: (72.109,108.484,56.597)
N4: (73.963,107.680,55.518)
C6: (70.497,107.216,54.785)
C5: (71.826,107.107,54.641)
O3': (66.215,108.806,53.334)
OP1: (67.157,104.352,51.343)
OP2: (69.696,104.662,51.419)
C4: (72.636,107.768,55.597)
O5': (68.172,105.673,53.135)
C3': (67.345,108.261,53.965)
C1': (68.504,108.054,55.994)
O4': (67.930,106.807,55.690)
C5': (66.902,105.803,53.760)
P: (68.418,104.483,52.129)
O2: (70.224,109.248,57.631)
C4': (66.921,106.990,54.669)
C2': (67.822,109.110,55.120)
O2': (66.695,109.602,55.800)
N1: (69.951,107.941,55.812)
N3: (72.109,108.484,56.597)
N4: (73.963,107.680,55.518)
C6: (70.497,107.216,54.785)
C5: (71.826,107.107,54.641)
O3': (66.215,108.806,53.334)
OP1: (68.523,106.453,46.543)
OP2: (70.174,104.865,47.701)
C3': (71.188,110.282,44.978)
C1': (73.325,110.044,45.845)
C5': (70.768,107.714,45.179)
O6: (79.226,109.860,46.822)
O4': (72.659,108.846,46.172)
C8: (75.496,109.166,44.820)
C2: (76.463,111.337,48.498)
C6: (78.058,110.186,47.027)
C5: (76.908,109.880,46.248)
C4: (75.674,110.312,46.693)
P: (69.854,106.205,47.152)
C4': (71.248,109.000,45.828)
C2': (72.645,110.463,44.560)
O2': (73.016,111.772,44.225)
N1: (77.731,110.939,48.157)
N2: (76.350,112.082,49.596)
N3: (75.381,111.034,47.800)
N7: (76.783,109.166,45.061)
N9: (74.767,109.839,45.775)
O5': (70.960,106.595,46.074)
O3': (70.805,111.374,45.822)
OP2: (70.174,104.865,47.701)
C3': (71.188,110.282,44.978)
C1': (73.325,110.044,45.845)
C5': (70.768,107.714,45.179)
O6: (79.226,109.860,46.822)
O4': (72.659,108.846,46.172)
C8: (75.496,109.166,44.820)
C2: (76.463,111.337,48.498)
C6: (78.058,110.186,47.027)
C5: (76.908,109.880,46.248)
C4: (75.674,110.312,46.693)
P: (69.854,106.205,47.152)
C4': (71.248,109.000,45.828)
C2': (72.645,110.463,44.560)
O2': (73.016,111.772,44.225)
N1: (77.731,110.939,48.157)
N2: (76.350,112.082,49.596)
N3: (75.381,111.034,47.800)
N7: (76.783,109.166,45.061)
N9: (74.767,109.839,45.775)
O5': (70.960,106.595,46.074)
O3': (70.805,111.374,45.822)
Image (generated by PyMOL):