Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A559:A574
Extra
PDB:
ATOM 1 O3' C A 558 -4.039 98.918 122.283 1.00 67.65 O
ATOM 2 P C A 559 -4.479 97.982 123.524 1.00 69.00 P
ATOM 3 OP1 C A 559 -3.752 98.463 124.732 1.00 68.84 O
ATOM 4 OP2 C A 559 -4.351 96.561 123.108 1.00 68.17 O
ATOM 5 O5' C A 559 -6.033 98.283 123.727 1.00 70.63 O
ATOM 6 C5' C A 559 -6.516 99.621 123.999 1.00 71.83 C
ATOM 7 C4' C A 559 -8.024 99.673 123.859 1.00 72.59 C
ATOM 8 O4' C A 559 -8.365 99.396 122.476 1.00 72.04 O
ATOM 9 C3' C A 559 -8.789 98.627 124.657 1.00 74.13 C
ATOM 10 O3' C A 559 -9.040 99.044 125.996 1.00 78.27 O
ATOM 11 C2' C A 559 -10.066 98.450 123.845 1.00 72.48 C
ATOM 12 O2' C A 559 -11.021 99.464 124.087 1.00 71.21 O
ATOM 13 C1' C A 559 -9.526 98.579 122.417 1.00 70.49 C
ATOM 14 N1 C A 559 -9.163 97.285 121.787 1.00 67.67 N
ATOM 15 C2 C A 559 -10.181 96.490 121.249 1.00 66.86 C
ATOM 16 O2 C A 559 -11.350 96.908 121.275 1.00 66.49 O
ATOM 17 N3 C A 559 -9.865 95.286 120.706 1.00 65.86 N
ATOM 18 C4 C A 559 -8.595 94.877 120.676 1.00 64.94 C
ATOM 19 N4 C A 559 -8.339 93.677 120.143 1.00 63.97 N
ATOM 20 C5 C A 559 -7.536 95.677 121.193 1.00 64.43 C
ATOM 21 C6 C A 559 -7.860 96.859 121.735 1.00 65.53 C
ATOM 22 P G A 560 -8.821 98.008 127.202 1.00 82.10 P
ATOM 23 OP1 G A 560 -9.130 98.728 128.466 1.00 82.01 O
ATOM 24 OP2 G A 560 -7.481 97.398 127.016 1.00 82.73 O
ATOM 25 O5' G A 560 -9.921 96.875 126.951 1.00 82.48 O
TER
ATOM 1 O3' C B 573 -10.812 84.334 116.754 1.00 68.39 O
ATOM 2 P C B 574 -10.874 85.204 115.388 1.00 67.89 P
ATOM 3 OP1 C B 574 -11.980 84.696 114.536 1.00 68.46 O
ATOM 4 OP2 C B 574 -9.504 85.278 114.826 1.00 67.92 O
ATOM 5 O5' C B 574 -11.326 86.650 115.870 1.00 64.44 O
ATOM 6 C5' C B 574 -12.682 86.889 116.266 1.00 64.35 C
ATOM 7 C4' C B 574 -12.830 88.283 116.817 1.00 65.02 C
ATOM 8 O4' C B 574 -11.932 88.456 117.943 1.00 65.78 O
ATOM 9 C3' C B 574 -12.449 89.399 115.864 1.00 65.42 C
ATOM 10 O3' C B 574 -13.506 89.709 114.966 1.00 63.81 O
ATOM 11 C2' C B 574 -12.115 90.544 116.812 1.00 66.99 C
ATOM 12 O2' C B 574 -13.255 91.238 117.287 1.00 67.70 O
ATOM 13 C1' C B 574 -11.441 89.792 117.966 1.00 67.60 C
ATOM 14 N1 C B 574 -9.960 89.759 117.889 1.00 68.87 N
ATOM 15 C2 C B 574 -9.219 90.859 118.372 1.00 68.70 C
ATOM 16 O2 C B 574 -9.820 91.846 118.840 1.00 67.31 O
ATOM 17 N3 C B 574 -7.866 90.815 118.310 1.00 69.50 N
ATOM 18 C4 C B 574 -7.250 89.744 117.792 1.00 69.79 C
ATOM 19 N4 C B 574 -5.915 89.743 117.756 1.00 70.99 N
ATOM 20 C5 C B 574 -7.974 88.625 117.290 1.00 69.38 C
ATOM 21 C6 C B 574 -9.312 88.673 117.358 1.00 69.97 C
ATOM 22 P A B 575 -13.171 90.177 113.465 1.00 64.17 P
ATOM 23 OP1 A B 575 -12.450 91.471 113.528 1.00 63.40 O
ATOM 24 OP2 A B 575 -14.409 90.071 112.661 1.00 64.61 O
ATOM 25 O5' A B 575 -12.156 89.084 112.916 1.00 62.62 O
TER
ATOM 2 P C A 559 -4.479 97.982 123.524 1.00 69.00 P
ATOM 3 OP1 C A 559 -3.752 98.463 124.732 1.00 68.84 O
ATOM 4 OP2 C A 559 -4.351 96.561 123.108 1.00 68.17 O
ATOM 5 O5' C A 559 -6.033 98.283 123.727 1.00 70.63 O
ATOM 6 C5' C A 559 -6.516 99.621 123.999 1.00 71.83 C
ATOM 7 C4' C A 559 -8.024 99.673 123.859 1.00 72.59 C
ATOM 8 O4' C A 559 -8.365 99.396 122.476 1.00 72.04 O
ATOM 9 C3' C A 559 -8.789 98.627 124.657 1.00 74.13 C
ATOM 10 O3' C A 559 -9.040 99.044 125.996 1.00 78.27 O
ATOM 11 C2' C A 559 -10.066 98.450 123.845 1.00 72.48 C
ATOM 12 O2' C A 559 -11.021 99.464 124.087 1.00 71.21 O
ATOM 13 C1' C A 559 -9.526 98.579 122.417 1.00 70.49 C
ATOM 14 N1 C A 559 -9.163 97.285 121.787 1.00 67.67 N
ATOM 15 C2 C A 559 -10.181 96.490 121.249 1.00 66.86 C
ATOM 16 O2 C A 559 -11.350 96.908 121.275 1.00 66.49 O
ATOM 17 N3 C A 559 -9.865 95.286 120.706 1.00 65.86 N
ATOM 18 C4 C A 559 -8.595 94.877 120.676 1.00 64.94 C
ATOM 19 N4 C A 559 -8.339 93.677 120.143 1.00 63.97 N
ATOM 20 C5 C A 559 -7.536 95.677 121.193 1.00 64.43 C
ATOM 21 C6 C A 559 -7.860 96.859 121.735 1.00 65.53 C
ATOM 22 P G A 560 -8.821 98.008 127.202 1.00 82.10 P
ATOM 23 OP1 G A 560 -9.130 98.728 128.466 1.00 82.01 O
ATOM 24 OP2 G A 560 -7.481 97.398 127.016 1.00 82.73 O
ATOM 25 O5' G A 560 -9.921 96.875 126.951 1.00 82.48 O
TER
ATOM 1 O3' C B 573 -10.812 84.334 116.754 1.00 68.39 O
ATOM 2 P C B 574 -10.874 85.204 115.388 1.00 67.89 P
ATOM 3 OP1 C B 574 -11.980 84.696 114.536 1.00 68.46 O
ATOM 4 OP2 C B 574 -9.504 85.278 114.826 1.00 67.92 O
ATOM 5 O5' C B 574 -11.326 86.650 115.870 1.00 64.44 O
ATOM 6 C5' C B 574 -12.682 86.889 116.266 1.00 64.35 C
ATOM 7 C4' C B 574 -12.830 88.283 116.817 1.00 65.02 C
ATOM 8 O4' C B 574 -11.932 88.456 117.943 1.00 65.78 O
ATOM 9 C3' C B 574 -12.449 89.399 115.864 1.00 65.42 C
ATOM 10 O3' C B 574 -13.506 89.709 114.966 1.00 63.81 O
ATOM 11 C2' C B 574 -12.115 90.544 116.812 1.00 66.99 C
ATOM 12 O2' C B 574 -13.255 91.238 117.287 1.00 67.70 O
ATOM 13 C1' C B 574 -11.441 89.792 117.966 1.00 67.60 C
ATOM 14 N1 C B 574 -9.960 89.759 117.889 1.00 68.87 N
ATOM 15 C2 C B 574 -9.219 90.859 118.372 1.00 68.70 C
ATOM 16 O2 C B 574 -9.820 91.846 118.840 1.00 67.31 O
ATOM 17 N3 C B 574 -7.866 90.815 118.310 1.00 69.50 N
ATOM 18 C4 C B 574 -7.250 89.744 117.792 1.00 69.79 C
ATOM 19 N4 C B 574 -5.915 89.743 117.756 1.00 70.99 N
ATOM 20 C5 C B 574 -7.974 88.625 117.290 1.00 69.38 C
ATOM 21 C6 C B 574 -9.312 88.673 117.358 1.00 69.97 C
ATOM 22 P A B 575 -13.171 90.177 113.465 1.00 64.17 P
ATOM 23 OP1 A B 575 -12.450 91.471 113.528 1.00 63.40 O
ATOM 24 OP2 A B 575 -14.409 90.071 112.661 1.00 64.61 O
ATOM 25 O5' A B 575 -12.156 89.084 112.916 1.00 62.62 O
TER
Atoms:
C2: (-10.181,96.490,121.249)
OP1: (-3.752,98.463,124.732)
OP2: (-4.351,96.561,123.108)
C4: (-8.595,94.877,120.676)
O5': (-6.033,98.283,123.727)
C3': (-8.789,98.627,124.657)
C1': (-9.526,98.579,122.417)
O4': (-8.365,99.396,122.476)
C5': (-6.516,99.621,123.999)
P: (-4.479,97.982,123.524)
O2: (-11.350,96.908,121.275)
C4': (-8.024,99.673,123.859)
C2': (-10.066,98.450,123.845)
O2': (-11.021,99.464,124.087)
N1: (-9.163,97.285,121.787)
N3: (-9.865,95.286,120.706)
N4: (-8.339,93.677,120.143)
C6: (-7.860,96.859,121.735)
C5: (-7.536,95.677,121.193)
O3': (-9.040,99.044,125.996)
OP1: (-3.752,98.463,124.732)
OP2: (-4.351,96.561,123.108)
C4: (-8.595,94.877,120.676)
O5': (-6.033,98.283,123.727)
C3': (-8.789,98.627,124.657)
C1': (-9.526,98.579,122.417)
O4': (-8.365,99.396,122.476)
C5': (-6.516,99.621,123.999)
P: (-4.479,97.982,123.524)
O2: (-11.350,96.908,121.275)
C4': (-8.024,99.673,123.859)
C2': (-10.066,98.450,123.845)
O2': (-11.021,99.464,124.087)
N1: (-9.163,97.285,121.787)
N3: (-9.865,95.286,120.706)
N4: (-8.339,93.677,120.143)
C6: (-7.860,96.859,121.735)
C5: (-7.536,95.677,121.193)
O3': (-9.040,99.044,125.996)
C2: (-9.219,90.859,118.372)
OP1: (-11.980,84.696,114.536)
OP2: (-9.504,85.278,114.826)
C4: (-7.250,89.744,117.792)
O5': (-11.326,86.650,115.870)
C3': (-12.449,89.399,115.864)
C1': (-11.441,89.792,117.966)
O4': (-11.932,88.456,117.943)
C5': (-12.682,86.889,116.266)
P: (-10.874,85.204,115.388)
O2: (-9.820,91.846,118.840)
C4': (-12.830,88.283,116.817)
C2': (-12.115,90.544,116.812)
O2': (-13.255,91.238,117.287)
N1: (-9.960,89.759,117.889)
N3: (-7.866,90.815,118.310)
N4: (-5.915,89.743,117.756)
C6: (-9.312,88.673,117.358)
C5: (-7.974,88.625,117.290)
O3': (-13.506,89.709,114.966)
OP1: (-11.980,84.696,114.536)
OP2: (-9.504,85.278,114.826)
C4: (-7.250,89.744,117.792)
O5': (-11.326,86.650,115.870)
C3': (-12.449,89.399,115.864)
C1': (-11.441,89.792,117.966)
O4': (-11.932,88.456,117.943)
C5': (-12.682,86.889,116.266)
P: (-10.874,85.204,115.388)
O2: (-9.820,91.846,118.840)
C4': (-12.830,88.283,116.817)
C2': (-12.115,90.544,116.812)
O2': (-13.255,91.238,117.287)
N1: (-9.960,89.759,117.889)
N3: (-7.866,90.815,118.310)
N4: (-5.915,89.743,117.756)
C6: (-9.312,88.673,117.358)
C5: (-7.974,88.625,117.290)
O3': (-13.506,89.709,114.966)
Image (generated by PyMOL):