Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A1898:A1921
Extra
PDB:
ATOM 1 O3' G A1897 -35.944 132.679 127.194 1.00 37.63 O
ATOM 2 P G A1898 -36.406 131.147 127.134 1.00 38.09 P
ATOM 3 OP1 G A1898 -37.097 130.910 128.430 1.00 35.19 O
ATOM 4 OP2 G A1898 -35.250 130.312 126.716 1.00 26.46 O
ATOM 5 O5' G A1898 -37.445 131.107 125.903 1.00 43.08 O
ATOM 6 C5' G A1898 -38.755 131.657 126.048 1.00 52.23 C
ATOM 7 C4' G A1898 -39.598 131.416 124.808 1.00 40.38 C
ATOM 8 O4' G A1898 -39.056 132.165 123.693 1.00 57.60 O
ATOM 9 C3' G A1898 -39.610 129.978 124.310 1.00 40.43 C
ATOM 10 O3' G A1898 -40.639 129.249 124.951 1.00 34.94 O
ATOM 11 C2' G A1898 -39.941 130.145 122.839 1.00 44.78 C
ATOM 12 O2' G A1898 -41.312 130.407 122.647 1.00 57.37 O
ATOM 13 C1' G A1898 -39.120 131.373 122.521 1.00 49.81 C
ATOM 14 N9 G A1898 -37.784 130.961 122.168 1.00 40.38 N
ATOM 15 C8 G A1898 -36.655 130.990 122.948 1.00 36.94 C
ATOM 16 N7 G A1898 -35.610 130.544 122.318 1.00 38.17 N
ATOM 17 C5 G A1898 -36.086 130.199 121.056 1.00 41.31 C
ATOM 18 C6 G A1898 -35.423 129.656 119.930 1.00 34.96 C
ATOM 19 O6 G A1898 -34.232 129.356 119.818 1.00 32.65 O
ATOM 20 N1 G A1898 -36.279 129.459 118.850 1.00 35.96 N
ATOM 21 C2 G A1898 -37.620 129.753 118.865 1.00 39.66 C
ATOM 22 N2 G A1898 -38.293 129.500 117.742 1.00 40.29 N
ATOM 23 N3 G A1898 -38.261 130.257 119.909 1.00 43.40 N
ATOM 24 C4 G A1898 -37.428 130.450 120.957 1.00 42.34 C
ATOM 25 P C A1899 -40.450 127.670 125.145 1.00 28.07 P
ATOM 26 OP1 C A1899 -41.625 127.160 125.904 1.00 27.70 O
ATOM 27 OP2 C A1899 -39.065 127.443 125.654 1.00 45.64 O
ATOM 28 O5' C A1899 -40.501 127.116 123.641 1.00 42.52 O
TER
ATOM 1 O3' U B1920 -48.717 134.974 118.273 1.00 80.97 O
ATOM 2 P A B1921 -48.463 136.242 117.354 1.00 61.84 P
ATOM 3 OP1 A B1921 -47.625 137.148 118.179 1.00 54.51 O
ATOM 4 OP2 A B1921 -49.762 136.703 116.800 1.00 62.32 O
ATOM 5 O5' A B1921 -47.612 135.640 116.132 1.00 45.54 O
ATOM 6 C5' A B1921 -47.030 136.511 115.165 1.00 46.31 C
ATOM 7 C4' A B1921 -45.599 136.102 114.810 1.00 52.18 C
ATOM 8 O4' A B1921 -44.632 136.620 115.766 1.00 52.10 O
ATOM 9 C3' A B1921 -45.352 134.599 114.748 1.00 54.70 C
ATOM 10 O3' A B1921 -45.561 134.166 113.420 1.00 54.54 O
ATOM 11 C2' A B1921 -43.879 134.451 115.119 1.00 50.90 C
ATOM 12 O2' A B1921 -43.027 134.517 113.988 1.00 39.58 O
ATOM 13 C1' A B1921 -43.645 135.640 116.048 1.00 51.99 C
ATOM 14 N9 A B1921 -43.723 135.285 117.462 1.00 54.38 N
ATOM 15 C8 A B1921 -44.663 135.695 118.369 1.00 58.94 C
ATOM 16 N7 A B1921 -44.482 135.210 119.576 1.00 58.28 N
ATOM 17 C5 A B1921 -43.341 134.433 119.451 1.00 47.48 C
ATOM 18 C6 A B1921 -42.622 133.649 120.372 1.00 43.63 C
ATOM 19 N6 A B1921 -42.972 133.527 121.653 1.00 49.63 N
ATOM 20 N1 A B1921 -41.532 132.992 119.925 1.00 39.75 N
ATOM 21 C2 A B1921 -41.194 133.120 118.637 1.00 46.30 C
ATOM 22 N3 A B1921 -41.787 133.829 117.678 1.00 50.41 N
ATOM 23 C4 A B1921 -42.863 134.468 118.155 1.00 49.73 C
ATOM 24 P A B1922 -46.620 133.009 113.133 1.00 49.58 P
ATOM 25 OP1 A B1922 -46.998 133.178 111.710 1.00 71.09 O
ATOM 26 OP2 A B1922 -47.638 133.007 114.216 1.00 54.18 O
ATOM 27 O5' A B1922 -45.727 131.695 113.286 1.00 43.95 O
TER
ATOM 2 P G A1898 -36.406 131.147 127.134 1.00 38.09 P
ATOM 3 OP1 G A1898 -37.097 130.910 128.430 1.00 35.19 O
ATOM 4 OP2 G A1898 -35.250 130.312 126.716 1.00 26.46 O
ATOM 5 O5' G A1898 -37.445 131.107 125.903 1.00 43.08 O
ATOM 6 C5' G A1898 -38.755 131.657 126.048 1.00 52.23 C
ATOM 7 C4' G A1898 -39.598 131.416 124.808 1.00 40.38 C
ATOM 8 O4' G A1898 -39.056 132.165 123.693 1.00 57.60 O
ATOM 9 C3' G A1898 -39.610 129.978 124.310 1.00 40.43 C
ATOM 10 O3' G A1898 -40.639 129.249 124.951 1.00 34.94 O
ATOM 11 C2' G A1898 -39.941 130.145 122.839 1.00 44.78 C
ATOM 12 O2' G A1898 -41.312 130.407 122.647 1.00 57.37 O
ATOM 13 C1' G A1898 -39.120 131.373 122.521 1.00 49.81 C
ATOM 14 N9 G A1898 -37.784 130.961 122.168 1.00 40.38 N
ATOM 15 C8 G A1898 -36.655 130.990 122.948 1.00 36.94 C
ATOM 16 N7 G A1898 -35.610 130.544 122.318 1.00 38.17 N
ATOM 17 C5 G A1898 -36.086 130.199 121.056 1.00 41.31 C
ATOM 18 C6 G A1898 -35.423 129.656 119.930 1.00 34.96 C
ATOM 19 O6 G A1898 -34.232 129.356 119.818 1.00 32.65 O
ATOM 20 N1 G A1898 -36.279 129.459 118.850 1.00 35.96 N
ATOM 21 C2 G A1898 -37.620 129.753 118.865 1.00 39.66 C
ATOM 22 N2 G A1898 -38.293 129.500 117.742 1.00 40.29 N
ATOM 23 N3 G A1898 -38.261 130.257 119.909 1.00 43.40 N
ATOM 24 C4 G A1898 -37.428 130.450 120.957 1.00 42.34 C
ATOM 25 P C A1899 -40.450 127.670 125.145 1.00 28.07 P
ATOM 26 OP1 C A1899 -41.625 127.160 125.904 1.00 27.70 O
ATOM 27 OP2 C A1899 -39.065 127.443 125.654 1.00 45.64 O
ATOM 28 O5' C A1899 -40.501 127.116 123.641 1.00 42.52 O
TER
ATOM 1 O3' U B1920 -48.717 134.974 118.273 1.00 80.97 O
ATOM 2 P A B1921 -48.463 136.242 117.354 1.00 61.84 P
ATOM 3 OP1 A B1921 -47.625 137.148 118.179 1.00 54.51 O
ATOM 4 OP2 A B1921 -49.762 136.703 116.800 1.00 62.32 O
ATOM 5 O5' A B1921 -47.612 135.640 116.132 1.00 45.54 O
ATOM 6 C5' A B1921 -47.030 136.511 115.165 1.00 46.31 C
ATOM 7 C4' A B1921 -45.599 136.102 114.810 1.00 52.18 C
ATOM 8 O4' A B1921 -44.632 136.620 115.766 1.00 52.10 O
ATOM 9 C3' A B1921 -45.352 134.599 114.748 1.00 54.70 C
ATOM 10 O3' A B1921 -45.561 134.166 113.420 1.00 54.54 O
ATOM 11 C2' A B1921 -43.879 134.451 115.119 1.00 50.90 C
ATOM 12 O2' A B1921 -43.027 134.517 113.988 1.00 39.58 O
ATOM 13 C1' A B1921 -43.645 135.640 116.048 1.00 51.99 C
ATOM 14 N9 A B1921 -43.723 135.285 117.462 1.00 54.38 N
ATOM 15 C8 A B1921 -44.663 135.695 118.369 1.00 58.94 C
ATOM 16 N7 A B1921 -44.482 135.210 119.576 1.00 58.28 N
ATOM 17 C5 A B1921 -43.341 134.433 119.451 1.00 47.48 C
ATOM 18 C6 A B1921 -42.622 133.649 120.372 1.00 43.63 C
ATOM 19 N6 A B1921 -42.972 133.527 121.653 1.00 49.63 N
ATOM 20 N1 A B1921 -41.532 132.992 119.925 1.00 39.75 N
ATOM 21 C2 A B1921 -41.194 133.120 118.637 1.00 46.30 C
ATOM 22 N3 A B1921 -41.787 133.829 117.678 1.00 50.41 N
ATOM 23 C4 A B1921 -42.863 134.468 118.155 1.00 49.73 C
ATOM 24 P A B1922 -46.620 133.009 113.133 1.00 49.58 P
ATOM 25 OP1 A B1922 -46.998 133.178 111.710 1.00 71.09 O
ATOM 26 OP2 A B1922 -47.638 133.007 114.216 1.00 54.18 O
ATOM 27 O5' A B1922 -45.727 131.695 113.286 1.00 43.95 O
TER
Atoms:
OP1: (-37.097,130.910,128.430)
OP2: (-35.250,130.312,126.716)
C3': (-39.610,129.978,124.310)
C1': (-39.120,131.373,122.521)
C5': (-38.755,131.657,126.048)
O6: (-34.232,129.356,119.818)
O4': (-39.056,132.165,123.693)
C8: (-36.655,130.990,122.948)
C2: (-37.620,129.753,118.865)
C6: (-35.423,129.656,119.930)
C5: (-36.086,130.199,121.056)
C4: (-37.428,130.450,120.957)
P: (-36.406,131.147,127.134)
C4': (-39.598,131.416,124.808)
C2': (-39.941,130.145,122.839)
O2': (-41.312,130.407,122.647)
N1: (-36.279,129.459,118.850)
N2: (-38.293,129.500,117.742)
N3: (-38.261,130.257,119.909)
N7: (-35.610,130.544,122.318)
N9: (-37.784,130.961,122.168)
O5': (-37.445,131.107,125.903)
O3': (-40.639,129.249,124.951)
OP2: (-35.250,130.312,126.716)
C3': (-39.610,129.978,124.310)
C1': (-39.120,131.373,122.521)
C5': (-38.755,131.657,126.048)
O6: (-34.232,129.356,119.818)
O4': (-39.056,132.165,123.693)
C8: (-36.655,130.990,122.948)
C2: (-37.620,129.753,118.865)
C6: (-35.423,129.656,119.930)
C5: (-36.086,130.199,121.056)
C4: (-37.428,130.450,120.957)
P: (-36.406,131.147,127.134)
C4': (-39.598,131.416,124.808)
C2': (-39.941,130.145,122.839)
O2': (-41.312,130.407,122.647)
N1: (-36.279,129.459,118.850)
N2: (-38.293,129.500,117.742)
N3: (-38.261,130.257,119.909)
N7: (-35.610,130.544,122.318)
N9: (-37.784,130.961,122.168)
O5': (-37.445,131.107,125.903)
O3': (-40.639,129.249,124.951)
OP1: (-47.625,137.148,118.179)
OP2: (-49.762,136.703,116.800)
C3': (-45.352,134.599,114.748)
C1': (-43.645,135.640,116.048)
C5': (-47.030,136.511,115.165)
O4': (-44.632,136.620,115.766)
C8: (-44.663,135.695,118.369)
O2': (-43.027,134.517,113.988)
C6: (-42.622,133.649,120.372)
C5: (-43.341,134.433,119.451)
C4: (-42.863,134.468,118.155)
P: (-48.463,136.242,117.354)
C4': (-45.599,136.102,114.810)
C2': (-43.879,134.451,115.119)
C2: (-41.194,133.120,118.637)
N1: (-41.532,132.992,119.925)
N3: (-41.787,133.829,117.678)
N6: (-42.972,133.527,121.653)
N7: (-44.482,135.210,119.576)
N9: (-43.723,135.285,117.462)
O5': (-47.612,135.640,116.132)
O3': (-45.561,134.166,113.420)
OP2: (-49.762,136.703,116.800)
C3': (-45.352,134.599,114.748)
C1': (-43.645,135.640,116.048)
C5': (-47.030,136.511,115.165)
O4': (-44.632,136.620,115.766)
C8: (-44.663,135.695,118.369)
O2': (-43.027,134.517,113.988)
C6: (-42.622,133.649,120.372)
C5: (-43.341,134.433,119.451)
C4: (-42.863,134.468,118.155)
P: (-48.463,136.242,117.354)
C4': (-45.599,136.102,114.810)
C2': (-43.879,134.451,115.119)
C2: (-41.194,133.120,118.637)
N1: (-41.532,132.992,119.925)
N3: (-41.787,133.829,117.678)
N6: (-42.972,133.527,121.653)
N7: (-44.482,135.210,119.576)
N9: (-43.723,135.285,117.462)
O5': (-47.612,135.640,116.132)
O3': (-45.561,134.166,113.420)
Image (generated by PyMOL):