ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01963:01964

Extra

PDB:
ATOM 1 O3' U A1962 114.525 132.224 105.522 1.00 60.72 O
ATOM 2 P U A1963 113.356 133.248 105.923 1.00 59.25 P
ATOM 3 OP1 U A1963 113.609 133.693 107.315 1.00 59.45 O
ATOM 4 OP2 U A1963 112.051 132.627 105.583 1.00 61.99 O
ATOM 5 O5' U A1963 113.597 134.477 104.939 1.00 58.13 O
ATOM 6 C5' U A1963 114.852 135.177 104.949 1.00 56.61 C
ATOM 7 C4' U A1963 115.028 135.985 103.685 1.00 55.86 C
ATOM 8 O4' U A1963 115.056 135.108 102.530 1.00 55.75 O
ATOM 9 C3' U A1963 113.933 136.981 103.357 1.00 55.00 C
ATOM 10 O3' U A1963 114.082 138.175 104.114 1.00 54.08 O
ATOM 11 C2' U A1963 114.149 137.200 101.865 1.00 56.07 C
ATOM 12 O2' U A1963 115.228 138.067 101.574 1.00 56.16 O
ATOM 13 C1' U A1963 114.526 135.789 101.407 1.00 56.06 C
ATOM 14 N1 U A1963 113.389 135.016 100.881 1.00 58.37 N
ATOM 15 C2 U A1963 113.194 135.013 99.508 1.00 58.80 C
ATOM 16 O2 U A1963 113.908 135.630 98.733 1.00 59.49 O
ATOM 17 N3 U A1963 112.127 134.264 99.075 1.00 59.14 N
ATOM 18 C4 U A1963 111.250 133.536 99.853 1.00 59.44 C
ATOM 19 O4 U A1963 110.337 132.911 99.310 1.00 59.29 O
ATOM 20 C5 U A1963 111.510 133.594 101.262 1.00 60.05 C
ATOM 21 C6 U A1963 112.543 134.313 101.717 1.00 59.20 C
ATOM 22 P A A1964 112.794 139.067 104.458 1.00 53.14 P
ATOM 23 OP1 A A1964 112.636 139.102 105.931 1.00 51.62 O
ATOM 24 OP2 A A1964 111.665 138.595 103.610 1.00 55.64 O
ATOM 25 O5' A A1964 113.193 140.524 103.953 1.00 51.85 O
TER

ATOM 1 O3' U B1963 114.082 138.175 104.114 1.00 54.08 O
ATOM 2 P A B1964 112.794 139.067 104.458 1.00 53.14 P
ATOM 3 OP1 A B1964 112.636 139.102 105.931 1.00 51.62 O
ATOM 4 OP2 A B1964 111.665 138.595 103.610 1.00 55.64 O
ATOM 5 O5' A B1964 113.193 140.524 103.953 1.00 51.85 O
ATOM 6 C5' A B1964 114.184 141.312 104.635 1.00 48.50 C
ATOM 7 C4' A B1964 114.697 142.397 103.722 1.00 46.50 C
ATOM 8 O4' A B1964 115.371 141.791 102.588 1.00 47.02 O
ATOM 9 C3' A B1964 113.621 143.256 103.090 1.00 45.57 C
ATOM 10 O3' A B1964 113.196 144.282 103.968 1.00 44.47 O
ATOM 11 C2' A B1964 114.313 143.780 101.840 1.00 46.96 C
ATOM 12 O2' A B1964 115.203 144.845 102.098 1.00 49.91 O
ATOM 13 C1' A B1964 115.121 142.553 101.417 1.00 47.03 C
ATOM 14 N9 A B1964 114.393 141.708 100.471 1.00 47.37 N
ATOM 15 C8 A B1964 113.716 140.542 100.731 1.00 46.21 C
ATOM 16 N7 A B1964 113.136 140.023 99.681 1.00 46.71 N
ATOM 17 C5 A B1964 113.451 140.904 98.657 1.00 47.32 C
ATOM 18 C6 A B1964 113.131 140.914 97.288 1.00 47.61 C
ATOM 19 N6 A B1964 112.378 139.983 96.697 1.00 47.64 N
ATOM 20 N1 A B1964 113.617 141.927 96.536 1.00 47.69 N
ATOM 21 C2 A B1964 114.370 142.860 97.131 1.00 48.18 C
ATOM 22 N3 A B1964 114.737 142.960 98.410 1.00 48.49 N
ATOM 23 C4 A B1964 114.237 141.940 99.127 1.00 47.56 C
ATOM 24 P A B1965 111.700 144.844 103.861 1.00 44.93 P
ATOM 25 OP1 A B1965 111.600 146.084 104.665 1.00 48.08 O
ATOM 26 OP2 A B1965 110.768 143.726 104.142 1.00 46.29 O
ATOM 27 O5' A B1965 111.573 145.266 102.331 1.00 44.48 O
TER

Atoms:
C4: (111.250,133.536,99.853)
N3: (112.127,134.264,99.075)
OP1: (113.609,133.693,107.315)
OP2: (112.051,132.627,105.583)
C2: (113.194,135.013,99.508)
C1': (114.526,135.789,101.407)
C3': (113.933,136.981,103.357)
O5': (113.597,134.477,104.939)
O4': (115.056,135.108,102.530)
C5': (114.852,135.177,104.949)
P: (113.356,133.248,105.923)
C4': (115.028,135.985,103.685)
C2': (114.149,137.200,101.865)
O2': (115.228,138.067,101.574)
N1: (113.389,135.016,100.881)
O4: (110.337,132.911,99.310)
O2: (113.908,135.630,98.733)
C6: (112.543,134.313,101.717)
C5: (111.510,133.594,101.262)
O3': (114.082,138.175,104.114)
OP1: (112.636,139.102,105.931)
OP2: (111.665,138.595,103.610)
C3': (113.621,143.256,103.090)
C1': (115.121,142.553,101.417)
C5': (114.184,141.312,104.635)
O4': (115.371,141.791,102.588)
C8: (113.716,140.542,100.731)
O2': (115.203,144.845,102.098)
C6: (113.131,140.914,97.288)
C5: (113.451,140.904,98.657)
C4: (114.237,141.940,99.127)
P: (112.794,139.067,104.458)
C4': (114.697,142.397,103.722)
C2': (114.313,143.780,101.840)
C2: (114.370,142.860,97.131)
N1: (113.617,141.927,96.536)
N3: (114.737,142.960,98.410)
N6: (112.378,139.983,96.697)
N7: (113.136,140.023,99.681)
N9: (114.393,141.708,100.471)
O5': (113.193,140.524,103.953)
O3': (113.196,144.282,103.968)
Image (generated by PyMOL):
PyMOL image
show in jmol