ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01963:01964

Extra

PDB:
ATOM 1 O3' U A1962 114.437 132.532 105.443 1.00 59.11 O
ATOM 2 P U A1963 113.273 133.558 105.864 1.00 57.98 P
ATOM 3 OP1 U A1963 113.540 133.984 107.259 1.00 58.28 O
ATOM 4 OP2 U A1963 111.957 132.962 105.525 1.00 59.59 O
ATOM 5 O5' U A1963 113.524 134.801 104.902 1.00 57.60 O
ATOM 6 C5' U A1963 114.794 135.483 104.913 1.00 54.89 C
ATOM 7 C4' U A1963 114.981 136.286 103.649 1.00 53.45 C
ATOM 8 O4' U A1963 115.034 135.406 102.497 1.00 53.30 O
ATOM 9 C3' U A1963 113.874 137.263 103.306 1.00 52.11 C
ATOM 10 O3' U A1963 113.985 138.462 104.059 1.00 50.45 O
ATOM 11 C2' U A1963 114.097 137.482 101.814 1.00 53.79 C
ATOM 12 O2' U A1963 115.154 138.374 101.521 1.00 53.18 O
ATOM 13 C1' U A1963 114.499 136.074 101.366 1.00 53.90 C
ATOM 14 N1 U A1963 113.369 135.290 100.845 1.00 55.38 N
ATOM 15 C2 U A1963 113.150 135.308 99.474 1.00 55.71 C
ATOM 16 O2 U A1963 113.844 135.948 98.697 1.00 54.79 O
ATOM 17 N3 U A1963 112.088 134.550 99.048 1.00 56.11 N
ATOM 18 C4 U A1963 111.239 133.793 99.831 1.00 56.39 C
ATOM 19 O4 U A1963 110.336 133.146 99.294 1.00 57.21 O
ATOM 20 C5 U A1963 111.524 133.833 101.233 1.00 56.49 C
ATOM 21 C6 U A1963 112.552 134.560 101.681 1.00 55.51 C
ATOM 22 P A A1964 112.665 139.293 104.430 1.00 47.66 P
ATOM 23 OP1 A A1964 112.492 139.261 105.903 1.00 45.75 O
ATOM 24 OP2 A A1964 111.566 138.807 103.556 1.00 51.11 O
ATOM 25 O5' A A1964 113.018 140.779 103.974 1.00 47.32 O
TER

ATOM 1 O3' U B1963 113.985 138.462 104.059 1.00 50.45 O
ATOM 2 P A B1964 112.665 139.293 104.430 1.00 47.66 P
ATOM 3 OP1 A B1964 112.492 139.261 105.903 1.00 45.75 O
ATOM 4 OP2 A B1964 111.566 138.807 103.556 1.00 51.11 O
ATOM 5 O5' A B1964 113.018 140.779 103.974 1.00 47.32 O
ATOM 6 C5' A B1964 114.051 141.537 104.625 1.00 43.52 C
ATOM 7 C4' A B1964 114.569 142.612 103.701 1.00 41.49 C
ATOM 8 O4' A B1964 115.245 141.997 102.574 1.00 41.73 O
ATOM 9 C3' A B1964 113.511 143.488 103.059 1.00 40.82 C
ATOM 10 O3' A B1964 113.084 144.526 103.924 1.00 40.42 O
ATOM 11 C2' A B1964 114.231 144.007 101.821 1.00 41.97 C
ATOM 12 O2' A B1964 115.131 145.059 102.105 1.00 43.39 O
ATOM 13 C1' A B1964 115.022 142.766 101.400 1.00 42.30 C
ATOM 14 N9 A B1964 114.288 141.933 100.446 1.00 43.06 N
ATOM 15 C8 A B1964 113.583 140.785 100.715 1.00 42.76 C
ATOM 16 N7 A B1964 113.001 140.265 99.667 1.00 42.93 N
ATOM 17 C5 A B1964 113.345 141.124 98.634 1.00 42.84 C
ATOM 18 C6 A B1964 113.037 141.121 97.263 1.00 42.42 C
ATOM 19 N6 A B1964 112.281 140.190 96.677 1.00 41.14 N
ATOM 20 N1 A B1964 113.544 142.118 96.504 1.00 42.98 N
ATOM 21 C2 A B1964 114.310 143.044 97.093 1.00 42.71 C
ATOM 22 N3 A B1964 114.673 143.151 98.371 1.00 43.91 N
ATOM 23 C4 A B1964 114.148 142.150 99.098 1.00 42.95 C
ATOM 24 P A B1965 111.581 145.077 103.817 1.00 41.09 P
ATOM 25 OP1 A B1965 111.457 146.322 104.617 1.00 43.50 O
ATOM 26 OP2 A B1965 110.666 143.940 104.095 1.00 42.18 O
ATOM 27 O5' A B1965 111.449 145.501 102.289 1.00 41.26 O
TER

Atoms:
C4: (111.239,133.793,99.831)
N3: (112.088,134.550,99.048)
OP1: (113.540,133.984,107.259)
OP2: (111.957,132.962,105.525)
C2: (113.150,135.308,99.474)
C1': (114.499,136.074,101.366)
C3': (113.874,137.263,103.306)
O5': (113.524,134.801,104.902)
O4': (115.034,135.406,102.497)
C5': (114.794,135.483,104.913)
P: (113.273,133.558,105.864)
C4': (114.981,136.286,103.649)
C2': (114.097,137.482,101.814)
O2': (115.154,138.374,101.521)
N1: (113.369,135.290,100.845)
O4: (110.336,133.146,99.294)
O2: (113.844,135.948,98.697)
C6: (112.552,134.560,101.681)
C5: (111.524,133.833,101.233)
O3': (113.985,138.462,104.059)
OP1: (112.492,139.261,105.903)
OP2: (111.566,138.807,103.556)
C3': (113.511,143.488,103.059)
C1': (115.022,142.766,101.400)
C5': (114.051,141.537,104.625)
O4': (115.245,141.997,102.574)
C8: (113.583,140.785,100.715)
O2': (115.131,145.059,102.105)
C6: (113.037,141.121,97.263)
C5: (113.345,141.124,98.634)
C4: (114.148,142.150,99.098)
P: (112.665,139.293,104.430)
C4': (114.569,142.612,103.701)
C2': (114.231,144.007,101.821)
C2: (114.310,143.044,97.093)
N1: (113.544,142.118,96.504)
N3: (114.673,143.151,98.371)
N6: (112.281,140.190,96.677)
N7: (113.001,140.265,99.667)
N9: (114.288,141.933,100.446)
O5': (113.018,140.779,103.974)
O3': (113.084,144.526,103.924)
Image (generated by PyMOL):
PyMOL image
show in jmol