Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01312:01313
Extra
PDB:
ATOM 1 O3' A A1311 37.525 118.809 58.952 1.00 47.54 O
ATOM 2 P C A1312 37.746 117.626 60.033 1.00 50.21 P
ATOM 3 OP1 C A1312 38.602 118.126 61.158 1.00 41.95 O
ATOM 4 OP2 C A1312 38.074 116.328 59.374 1.00 48.70 O
ATOM 5 O5' C A1312 36.267 117.508 60.611 1.00 44.21 O
ATOM 6 C5' C A1312 35.466 118.696 60.779 1.00 35.10 C
ATOM 7 C4' C A1312 34.255 118.389 61.606 1.00 33.77 C
ATOM 8 O4' C A1312 33.252 117.727 60.804 1.00 34.03 O
ATOM 9 C3' C A1312 34.506 117.458 62.779 1.00 31.45 C
ATOM 10 O3' C A1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 11 C2' C A1312 33.119 116.877 63.027 1.00 31.21 C
ATOM 12 O2' C A1312 32.288 117.763 63.747 1.00 32.42 O
ATOM 13 C1' C A1312 32.578 116.767 61.597 1.00 31.47 C
ATOM 14 N1 C A1312 32.773 115.449 60.978 1.00 28.99 N
ATOM 15 C2 C A1312 31.938 114.400 61.354 1.00 26.55 C
ATOM 16 O2 C A1312 31.049 114.614 62.194 1.00 28.98 O
ATOM 17 N3 C A1312 32.112 113.186 60.794 1.00 23.31 N
ATOM 18 C4 C A1312 33.062 113.007 59.875 1.00 24.73 C
ATOM 19 N4 C A1312 33.186 111.802 59.327 1.00 20.98 N
ATOM 20 C5 C A1312 33.927 114.061 59.472 1.00 26.99 C
ATOM 21 C6 C A1312 33.753 115.253 60.046 1.00 27.83 C
ATOM 22 P G A1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 23 OP1 G A1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 24 OP2 G A1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 25 O5' G A1313 34.427 117.982 66.269 1.00 23.41 O
TER
ATOM 1 O3' C B1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 2 P G B1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 3 OP1 G B1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 4 OP2 G B1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 5 O5' G B1313 34.427 117.982 66.269 1.00 23.41 O
ATOM 6 C5' G B1313 33.966 119.348 66.310 1.00 21.91 C
ATOM 7 C4' G B1313 32.802 119.472 67.265 1.00 25.85 C
ATOM 8 O4' G B1313 31.771 118.541 66.835 1.00 29.75 O
ATOM 9 C3' G B1313 33.096 119.104 68.717 1.00 26.25 C
ATOM 10 O3' G B1313 32.146 119.755 69.547 1.00 24.99 O
ATOM 11 C2' G B1313 32.784 117.616 68.737 1.00 27.43 C
ATOM 12 O2' G B1313 32.477 117.137 70.025 1.00 28.51 O
ATOM 13 C1' G B1313 31.545 117.584 67.847 1.00 28.56 C
ATOM 14 N9 G B1313 31.273 116.300 67.219 1.00 29.58 N
ATOM 15 C8 G B1313 32.125 115.537 66.454 1.00 30.40 C
ATOM 16 N7 G B1313 31.580 114.422 66.045 1.00 31.30 N
ATOM 17 C5 G B1313 30.294 114.453 66.573 1.00 30.77 C
ATOM 18 C6 G B1313 29.239 113.517 66.474 1.00 29.55 C
ATOM 19 O6 G B1313 29.225 112.444 65.881 1.00 32.59 O
ATOM 20 N1 G B1313 28.108 113.943 67.157 1.00 29.07 N
ATOM 21 C2 G B1313 28.000 115.128 67.840 1.00 31.06 C
ATOM 22 N2 G B1313 26.816 115.371 68.427 1.00 30.60 N
ATOM 23 N3 G B1313 28.978 116.014 67.941 1.00 30.25 N
ATOM 24 C4 G B1313 30.089 115.611 67.291 1.00 30.19 C
ATOM 25 P A B1314 32.530 121.118 70.292 1.00 29.50 P
ATOM 26 OP1 A B1314 31.313 121.641 70.964 1.00 25.99 O
ATOM 27 OP2 A B1314 33.236 121.960 69.284 1.00 28.15 O
ATOM 28 O5' A B1314 33.557 120.662 71.423 1.00 28.44 O
TER
ATOM 2 P C A1312 37.746 117.626 60.033 1.00 50.21 P
ATOM 3 OP1 C A1312 38.602 118.126 61.158 1.00 41.95 O
ATOM 4 OP2 C A1312 38.074 116.328 59.374 1.00 48.70 O
ATOM 5 O5' C A1312 36.267 117.508 60.611 1.00 44.21 O
ATOM 6 C5' C A1312 35.466 118.696 60.779 1.00 35.10 C
ATOM 7 C4' C A1312 34.255 118.389 61.606 1.00 33.77 C
ATOM 8 O4' C A1312 33.252 117.727 60.804 1.00 34.03 O
ATOM 9 C3' C A1312 34.506 117.458 62.779 1.00 31.45 C
ATOM 10 O3' C A1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 11 C2' C A1312 33.119 116.877 63.027 1.00 31.21 C
ATOM 12 O2' C A1312 32.288 117.763 63.747 1.00 32.42 O
ATOM 13 C1' C A1312 32.578 116.767 61.597 1.00 31.47 C
ATOM 14 N1 C A1312 32.773 115.449 60.978 1.00 28.99 N
ATOM 15 C2 C A1312 31.938 114.400 61.354 1.00 26.55 C
ATOM 16 O2 C A1312 31.049 114.614 62.194 1.00 28.98 O
ATOM 17 N3 C A1312 32.112 113.186 60.794 1.00 23.31 N
ATOM 18 C4 C A1312 33.062 113.007 59.875 1.00 24.73 C
ATOM 19 N4 C A1312 33.186 111.802 59.327 1.00 20.98 N
ATOM 20 C5 C A1312 33.927 114.061 59.472 1.00 26.99 C
ATOM 21 C6 C A1312 33.753 115.253 60.046 1.00 27.83 C
ATOM 22 P G A1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 23 OP1 G A1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 24 OP2 G A1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 25 O5' G A1313 34.427 117.982 66.269 1.00 23.41 O
TER
ATOM 1 O3' C B1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 2 P G B1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 3 OP1 G B1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 4 OP2 G B1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 5 O5' G B1313 34.427 117.982 66.269 1.00 23.41 O
ATOM 6 C5' G B1313 33.966 119.348 66.310 1.00 21.91 C
ATOM 7 C4' G B1313 32.802 119.472 67.265 1.00 25.85 C
ATOM 8 O4' G B1313 31.771 118.541 66.835 1.00 29.75 O
ATOM 9 C3' G B1313 33.096 119.104 68.717 1.00 26.25 C
ATOM 10 O3' G B1313 32.146 119.755 69.547 1.00 24.99 O
ATOM 11 C2' G B1313 32.784 117.616 68.737 1.00 27.43 C
ATOM 12 O2' G B1313 32.477 117.137 70.025 1.00 28.51 O
ATOM 13 C1' G B1313 31.545 117.584 67.847 1.00 28.56 C
ATOM 14 N9 G B1313 31.273 116.300 67.219 1.00 29.58 N
ATOM 15 C8 G B1313 32.125 115.537 66.454 1.00 30.40 C
ATOM 16 N7 G B1313 31.580 114.422 66.045 1.00 31.30 N
ATOM 17 C5 G B1313 30.294 114.453 66.573 1.00 30.77 C
ATOM 18 C6 G B1313 29.239 113.517 66.474 1.00 29.55 C
ATOM 19 O6 G B1313 29.225 112.444 65.881 1.00 32.59 O
ATOM 20 N1 G B1313 28.108 113.943 67.157 1.00 29.07 N
ATOM 21 C2 G B1313 28.000 115.128 67.840 1.00 31.06 C
ATOM 22 N2 G B1313 26.816 115.371 68.427 1.00 30.60 N
ATOM 23 N3 G B1313 28.978 116.014 67.941 1.00 30.25 N
ATOM 24 C4 G B1313 30.089 115.611 67.291 1.00 30.19 C
ATOM 25 P A B1314 32.530 121.118 70.292 1.00 29.50 P
ATOM 26 OP1 A B1314 31.313 121.641 70.964 1.00 25.99 O
ATOM 27 OP2 A B1314 33.236 121.960 69.284 1.00 28.15 O
ATOM 28 O5' A B1314 33.557 120.662 71.423 1.00 28.44 O
TER
Atoms:
C2: (31.938,114.400,61.354)
OP1: (38.602,118.126,61.158)
OP2: (38.074,116.328,59.374)
C4: (33.062,113.007,59.875)
O5': (36.267,117.508,60.611)
C3': (34.506,117.458,62.779)
C1': (32.578,116.767,61.597)
O4': (33.252,117.727,60.804)
C5': (35.466,118.696,60.779)
P: (37.746,117.626,60.033)
O2: (31.049,114.614,62.194)
C4': (34.255,118.389,61.606)
C2': (33.119,116.877,63.027)
O2': (32.288,117.763,63.747)
N1: (32.773,115.449,60.978)
N3: (32.112,113.186,60.794)
N4: (33.186,111.802,59.327)
C6: (33.753,115.253,60.046)
C5: (33.927,114.061,59.472)
O3': (35.014,118.231,63.863)
OP1: (38.602,118.126,61.158)
OP2: (38.074,116.328,59.374)
C4: (33.062,113.007,59.875)
O5': (36.267,117.508,60.611)
C3': (34.506,117.458,62.779)
C1': (32.578,116.767,61.597)
O4': (33.252,117.727,60.804)
C5': (35.466,118.696,60.779)
P: (37.746,117.626,60.033)
O2: (31.049,114.614,62.194)
C4': (34.255,118.389,61.606)
C2': (33.119,116.877,63.027)
O2': (32.288,117.763,63.747)
N1: (32.773,115.449,60.978)
N3: (32.112,113.186,60.794)
N4: (33.186,111.802,59.327)
C6: (33.753,115.253,60.046)
C5: (33.927,114.061,59.472)
O3': (35.014,118.231,63.863)
OP1: (36.798,118.166,65.574)
OP2: (35.460,116.041,65.052)
C3': (33.096,119.104,68.717)
C1': (31.545,117.584,67.847)
C5': (33.966,119.348,66.310)
O6: (29.225,112.444,65.881)
O4': (31.771,118.541,66.835)
C8: (32.125,115.537,66.454)
C2: (28.000,115.128,67.840)
C6: (29.239,113.517,66.474)
C5: (30.294,114.453,66.573)
C4: (30.089,115.611,67.291)
P: (35.517,117.519,65.206)
C4': (32.802,119.472,67.265)
C2': (32.784,117.616,68.737)
O2': (32.477,117.137,70.025)
N1: (28.108,113.943,67.157)
N2: (26.816,115.371,68.427)
N3: (28.978,116.014,67.941)
N7: (31.580,114.422,66.045)
N9: (31.273,116.300,67.219)
O5': (34.427,117.982,66.269)
O3': (32.146,119.755,69.547)
OP2: (35.460,116.041,65.052)
C3': (33.096,119.104,68.717)
C1': (31.545,117.584,67.847)
C5': (33.966,119.348,66.310)
O6: (29.225,112.444,65.881)
O4': (31.771,118.541,66.835)
C8: (32.125,115.537,66.454)
C2: (28.000,115.128,67.840)
C6: (29.239,113.517,66.474)
C5: (30.294,114.453,66.573)
C4: (30.089,115.611,67.291)
P: (35.517,117.519,65.206)
C4': (32.802,119.472,67.265)
C2': (32.784,117.616,68.737)
O2': (32.477,117.137,70.025)
N1: (28.108,113.943,67.157)
N2: (26.816,115.371,68.427)
N3: (28.978,116.014,67.941)
N7: (31.580,114.422,66.045)
N9: (31.273,116.300,67.219)
O5': (34.427,117.982,66.269)
O3': (32.146,119.755,69.547)
Image (generated by PyMOL):