Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A1388:A1812
Extra
PDB:
ATOM 1 O3' G A1387 0.821 164.963 147.186 1.00 30.95 O
ATOM 2 P G A1388 1.761 164.161 146.190 1.00 35.96 P
ATOM 3 OP1 G A1388 1.874 162.806 146.812 1.00 27.54 O
ATOM 4 OP2 G A1388 2.983 164.992 145.946 1.00 33.52 O
ATOM 5 O5' G A1388 0.933 164.114 144.809 1.00 31.66 O
ATOM 6 C5' G A1388 -0.019 163.123 144.596 1.00 28.78 C
ATOM 7 C4' G A1388 -0.515 163.327 143.192 1.00 21.76 C
ATOM 8 O4' G A1388 -0.846 164.720 142.998 1.00 26.75 O
ATOM 9 C3' G A1388 0.541 163.078 142.143 1.00 24.68 C
ATOM 10 O3' G A1388 0.594 161.692 141.835 1.00 28.55 O
ATOM 11 C2' G A1388 0.013 163.859 140.948 1.00 29.21 C
ATOM 12 O2' G A1388 -0.940 163.104 140.217 1.00 23.48 O
ATOM 13 C1' G A1388 -0.593 165.069 141.649 1.00 33.44 C
ATOM 14 N9 G A1388 0.324 166.183 141.691 1.00 34.45 N
ATOM 15 C8 G A1388 0.908 166.714 142.814 1.00 36.05 C
ATOM 16 N7 G A1388 1.692 167.716 142.548 1.00 34.59 N
ATOM 17 C5 G A1388 1.621 167.849 141.159 1.00 40.77 C
ATOM 18 C6 G A1388 2.267 168.776 140.287 1.00 49.63 C
ATOM 19 O6 G A1388 3.060 169.699 140.564 1.00 54.83 O
ATOM 20 N1 G A1388 1.904 168.550 138.957 1.00 46.49 N
ATOM 21 C2 G A1388 1.040 167.568 138.527 1.00 40.26 C
ATOM 22 N2 G A1388 0.826 167.525 137.205 1.00 39.49 N
ATOM 23 N3 G A1388 0.438 166.699 139.331 1.00 36.56 N
ATOM 24 C4 G A1388 0.775 166.903 140.622 1.00 35.67 C
ATOM 25 P C A1389 2.061 161.075 141.694 1.00 35.69 P
ATOM 26 OP1 C A1389 1.870 159.606 141.722 1.00 31.79 O
ATOM 27 OP2 C A1389 2.896 161.754 142.716 1.00 40.24 O
ATOM 28 O5' C A1389 2.598 161.568 140.255 1.00 32.63 O
TER
ATOM 1 O3' U B1811 -11.554 164.846 135.984 1.00 44.96 O
ATOM 2 P A B1812 -10.663 164.036 134.947 1.00 36.97 P
ATOM 3 OP1 A B1812 -11.316 163.996 133.607 1.00 52.81 O
ATOM 4 OP2 A B1812 -10.314 162.757 135.629 1.00 36.99 O
ATOM 5 O5' A B1812 -9.414 165.052 134.884 1.00 42.38 O
ATOM 6 C5' A B1812 -9.610 166.397 134.410 1.00 42.41 C
ATOM 7 C4' A B1812 -8.346 167.242 134.481 1.00 38.98 C
ATOM 8 O4' A B1812 -7.936 167.364 135.861 1.00 45.35 O
ATOM 9 C3' A B1812 -7.140 166.710 133.723 1.00 30.02 C
ATOM 10 O3' A B1812 -7.102 167.392 132.483 1.00 30.35 O
ATOM 11 C2' A B1812 -5.954 167.103 134.591 1.00 38.03 C
ATOM 12 O2' A B1812 -5.461 168.378 134.262 1.00 53.84 O
ATOM 13 C1' A B1812 -6.540 167.231 135.977 1.00 44.39 C
ATOM 14 N9 A B1812 -6.289 166.092 136.832 1.00 46.67 N
ATOM 15 C8 A B1812 -6.950 164.903 136.849 1.00 57.55 C
ATOM 16 N7 A B1812 -6.502 164.062 137.753 1.00 53.46 N
ATOM 17 C5 A B1812 -5.485 164.759 138.376 1.00 48.61 C
ATOM 18 C6 A B1812 -4.614 164.421 139.427 1.00 50.23 C
ATOM 19 N6 A B1812 -4.635 163.244 140.060 1.00 50.99 N
ATOM 20 N1 A B1812 -3.718 165.357 139.802 1.00 53.67 N
ATOM 21 C2 A B1812 -3.705 166.535 139.158 1.00 49.11 C
ATOM 22 N3 A B1812 -4.470 166.961 138.156 1.00 43.42 N
ATOM 23 C4 A B1812 -5.345 166.014 137.815 1.00 42.68 C
ATOM 24 P A B1813 -6.377 166.801 131.172 1.00 29.86 P
ATOM 25 OP1 A B1813 -6.627 167.723 130.045 1.00 46.93 O
ATOM 26 OP2 A B1813 -6.786 165.382 131.044 1.00 56.93 O
ATOM 27 O5' A B1813 -4.804 166.848 131.496 1.00 43.28 O
TER
ATOM 2 P G A1388 1.761 164.161 146.190 1.00 35.96 P
ATOM 3 OP1 G A1388 1.874 162.806 146.812 1.00 27.54 O
ATOM 4 OP2 G A1388 2.983 164.992 145.946 1.00 33.52 O
ATOM 5 O5' G A1388 0.933 164.114 144.809 1.00 31.66 O
ATOM 6 C5' G A1388 -0.019 163.123 144.596 1.00 28.78 C
ATOM 7 C4' G A1388 -0.515 163.327 143.192 1.00 21.76 C
ATOM 8 O4' G A1388 -0.846 164.720 142.998 1.00 26.75 O
ATOM 9 C3' G A1388 0.541 163.078 142.143 1.00 24.68 C
ATOM 10 O3' G A1388 0.594 161.692 141.835 1.00 28.55 O
ATOM 11 C2' G A1388 0.013 163.859 140.948 1.00 29.21 C
ATOM 12 O2' G A1388 -0.940 163.104 140.217 1.00 23.48 O
ATOM 13 C1' G A1388 -0.593 165.069 141.649 1.00 33.44 C
ATOM 14 N9 G A1388 0.324 166.183 141.691 1.00 34.45 N
ATOM 15 C8 G A1388 0.908 166.714 142.814 1.00 36.05 C
ATOM 16 N7 G A1388 1.692 167.716 142.548 1.00 34.59 N
ATOM 17 C5 G A1388 1.621 167.849 141.159 1.00 40.77 C
ATOM 18 C6 G A1388 2.267 168.776 140.287 1.00 49.63 C
ATOM 19 O6 G A1388 3.060 169.699 140.564 1.00 54.83 O
ATOM 20 N1 G A1388 1.904 168.550 138.957 1.00 46.49 N
ATOM 21 C2 G A1388 1.040 167.568 138.527 1.00 40.26 C
ATOM 22 N2 G A1388 0.826 167.525 137.205 1.00 39.49 N
ATOM 23 N3 G A1388 0.438 166.699 139.331 1.00 36.56 N
ATOM 24 C4 G A1388 0.775 166.903 140.622 1.00 35.67 C
ATOM 25 P C A1389 2.061 161.075 141.694 1.00 35.69 P
ATOM 26 OP1 C A1389 1.870 159.606 141.722 1.00 31.79 O
ATOM 27 OP2 C A1389 2.896 161.754 142.716 1.00 40.24 O
ATOM 28 O5' C A1389 2.598 161.568 140.255 1.00 32.63 O
TER
ATOM 1 O3' U B1811 -11.554 164.846 135.984 1.00 44.96 O
ATOM 2 P A B1812 -10.663 164.036 134.947 1.00 36.97 P
ATOM 3 OP1 A B1812 -11.316 163.996 133.607 1.00 52.81 O
ATOM 4 OP2 A B1812 -10.314 162.757 135.629 1.00 36.99 O
ATOM 5 O5' A B1812 -9.414 165.052 134.884 1.00 42.38 O
ATOM 6 C5' A B1812 -9.610 166.397 134.410 1.00 42.41 C
ATOM 7 C4' A B1812 -8.346 167.242 134.481 1.00 38.98 C
ATOM 8 O4' A B1812 -7.936 167.364 135.861 1.00 45.35 O
ATOM 9 C3' A B1812 -7.140 166.710 133.723 1.00 30.02 C
ATOM 10 O3' A B1812 -7.102 167.392 132.483 1.00 30.35 O
ATOM 11 C2' A B1812 -5.954 167.103 134.591 1.00 38.03 C
ATOM 12 O2' A B1812 -5.461 168.378 134.262 1.00 53.84 O
ATOM 13 C1' A B1812 -6.540 167.231 135.977 1.00 44.39 C
ATOM 14 N9 A B1812 -6.289 166.092 136.832 1.00 46.67 N
ATOM 15 C8 A B1812 -6.950 164.903 136.849 1.00 57.55 C
ATOM 16 N7 A B1812 -6.502 164.062 137.753 1.00 53.46 N
ATOM 17 C5 A B1812 -5.485 164.759 138.376 1.00 48.61 C
ATOM 18 C6 A B1812 -4.614 164.421 139.427 1.00 50.23 C
ATOM 19 N6 A B1812 -4.635 163.244 140.060 1.00 50.99 N
ATOM 20 N1 A B1812 -3.718 165.357 139.802 1.00 53.67 N
ATOM 21 C2 A B1812 -3.705 166.535 139.158 1.00 49.11 C
ATOM 22 N3 A B1812 -4.470 166.961 138.156 1.00 43.42 N
ATOM 23 C4 A B1812 -5.345 166.014 137.815 1.00 42.68 C
ATOM 24 P A B1813 -6.377 166.801 131.172 1.00 29.86 P
ATOM 25 OP1 A B1813 -6.627 167.723 130.045 1.00 46.93 O
ATOM 26 OP2 A B1813 -6.786 165.382 131.044 1.00 56.93 O
ATOM 27 O5' A B1813 -4.804 166.848 131.496 1.00 43.28 O
TER
Atoms:
OP1: (1.874,162.806,146.812)
OP2: (2.983,164.992,145.946)
C3': (0.541,163.078,142.143)
C1': (-0.593,165.069,141.649)
C5': (-0.019,163.123,144.596)
O6: (3.060,169.699,140.564)
O4': (-0.846,164.720,142.998)
C8: (0.908,166.714,142.814)
C2: (1.040,167.568,138.527)
C6: (2.267,168.776,140.287)
C5: (1.621,167.849,141.159)
C4: (0.775,166.903,140.622)
P: (1.761,164.161,146.190)
C4': (-0.515,163.327,143.192)
C2': (0.013,163.859,140.948)
O2': (-0.940,163.104,140.217)
N1: (1.904,168.550,138.957)
N2: (0.826,167.525,137.205)
N3: (0.438,166.699,139.331)
N7: (1.692,167.716,142.548)
N9: (0.324,166.183,141.691)
O5': (0.933,164.114,144.809)
O3': (0.594,161.692,141.835)
OP2: (2.983,164.992,145.946)
C3': (0.541,163.078,142.143)
C1': (-0.593,165.069,141.649)
C5': (-0.019,163.123,144.596)
O6: (3.060,169.699,140.564)
O4': (-0.846,164.720,142.998)
C8: (0.908,166.714,142.814)
C2: (1.040,167.568,138.527)
C6: (2.267,168.776,140.287)
C5: (1.621,167.849,141.159)
C4: (0.775,166.903,140.622)
P: (1.761,164.161,146.190)
C4': (-0.515,163.327,143.192)
C2': (0.013,163.859,140.948)
O2': (-0.940,163.104,140.217)
N1: (1.904,168.550,138.957)
N2: (0.826,167.525,137.205)
N3: (0.438,166.699,139.331)
N7: (1.692,167.716,142.548)
N9: (0.324,166.183,141.691)
O5': (0.933,164.114,144.809)
O3': (0.594,161.692,141.835)
OP1: (-11.316,163.996,133.607)
OP2: (-10.314,162.757,135.629)
C3': (-7.140,166.710,133.723)
C1': (-6.540,167.231,135.977)
C5': (-9.610,166.397,134.410)
O4': (-7.936,167.364,135.861)
C8: (-6.950,164.903,136.849)
O2': (-5.461,168.378,134.262)
C6: (-4.614,164.421,139.427)
C5: (-5.485,164.759,138.376)
C4: (-5.345,166.014,137.815)
P: (-10.663,164.036,134.947)
C4': (-8.346,167.242,134.481)
C2': (-5.954,167.103,134.591)
C2: (-3.705,166.535,139.158)
N1: (-3.718,165.357,139.802)
N3: (-4.470,166.961,138.156)
N6: (-4.635,163.244,140.060)
N7: (-6.502,164.062,137.753)
N9: (-6.289,166.092,136.832)
O5': (-9.414,165.052,134.884)
O3': (-7.102,167.392,132.483)
OP2: (-10.314,162.757,135.629)
C3': (-7.140,166.710,133.723)
C1': (-6.540,167.231,135.977)
C5': (-9.610,166.397,134.410)
O4': (-7.936,167.364,135.861)
C8: (-6.950,164.903,136.849)
O2': (-5.461,168.378,134.262)
C6: (-4.614,164.421,139.427)
C5: (-5.485,164.759,138.376)
C4: (-5.345,166.014,137.815)
P: (-10.663,164.036,134.947)
C4': (-8.346,167.242,134.481)
C2': (-5.954,167.103,134.591)
C2: (-3.705,166.535,139.158)
N1: (-3.718,165.357,139.802)
N3: (-4.470,166.961,138.156)
N6: (-4.635,163.244,140.060)
N7: (-6.502,164.062,137.753)
N9: (-6.289,166.092,136.832)
O5': (-9.414,165.052,134.884)
O3': (-7.102,167.392,132.483)
Image (generated by PyMOL):