Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01312:01313
Extra
PDB:
ATOM 1 O3' A A1311 37.605 118.709 58.988 1.00 57.07 O
ATOM 2 P C A1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 3 OP1 C A1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 4 OP2 C A1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 5 O5' C A1312 36.540 117.658 60.975 1.00 52.08 O
ATOM 6 C5' C A1312 35.773 118.857 61.136 1.00 47.64 C
ATOM 7 C4' C A1312 34.513 118.558 61.888 1.00 43.63 C
ATOM 8 O4' C A1312 33.590 117.856 61.034 1.00 41.37 O
ATOM 9 C3' C A1312 34.712 117.634 63.074 1.00 43.74 C
ATOM 10 O3' C A1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 11 C2' C A1312 33.321 117.050 63.258 1.00 42.78 C
ATOM 12 O2' C A1312 32.465 117.947 63.926 1.00 46.43 O
ATOM 13 C1' C A1312 32.859 116.923 61.804 1.00 41.91 C
ATOM 14 N1 C A1312 33.049 115.584 61.231 1.00 38.68 N
ATOM 15 C2 C A1312 32.213 114.556 61.656 1.00 37.71 C
ATOM 16 O2 C A1312 31.342 114.808 62.499 1.00 38.20 O
ATOM 17 N3 C A1312 32.374 113.314 61.139 1.00 36.66 N
ATOM 18 C4 C A1312 33.324 113.092 60.229 1.00 36.67 C
ATOM 19 N4 C A1312 33.453 111.859 59.742 1.00 33.66 N
ATOM 20 C5 C A1312 34.187 114.128 59.776 1.00 37.62 C
ATOM 21 C6 C A1312 34.017 115.346 60.300 1.00 37.41 C
ATOM 22 P G A1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 23 OP1 G A1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 24 OP2 G A1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 25 O5' G A1313 34.748 118.104 66.615 1.00 35.66 O
TER
ATOM 1 O3' C B1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 2 P G B1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 3 OP1 G B1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 4 OP2 G B1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 5 O5' G B1313 34.748 118.104 66.615 1.00 35.66 O
ATOM 6 C5' G B1313 34.263 119.463 66.623 1.00 37.99 C
ATOM 7 C4' G B1313 33.068 119.591 67.526 1.00 38.20 C
ATOM 8 O4' G B1313 32.069 118.650 67.059 1.00 40.34 O
ATOM 9 C3' G B1313 33.313 119.251 68.993 1.00 37.86 C
ATOM 10 O3' G B1313 32.372 119.954 69.791 1.00 38.21 O
ATOM 11 C2' G B1313 32.969 117.769 69.039 1.00 38.69 C
ATOM 12 O2' G B1313 32.542 117.352 70.316 1.00 40.04 O
ATOM 13 C1' G B1313 31.788 117.721 68.079 1.00 39.27 C
ATOM 14 N9 G B1313 31.550 116.418 67.474 1.00 39.01 N
ATOM 15 C8 G B1313 32.427 115.644 66.746 1.00 39.40 C
ATOM 16 N7 G B1313 31.901 114.514 66.347 1.00 39.81 N
ATOM 17 C5 G B1313 30.602 114.550 66.843 1.00 39.91 C
ATOM 18 C6 G B1313 29.549 113.612 66.734 1.00 39.53 C
ATOM 19 O6 G B1313 29.547 112.519 66.147 1.00 41.17 O
ATOM 20 N1 G B1313 28.402 114.055 67.387 1.00 36.60 N
ATOM 21 C2 G B1313 28.281 115.252 68.041 1.00 37.40 C
ATOM 22 N2 G B1313 27.092 115.518 68.591 1.00 39.29 N
ATOM 23 N3 G B1313 29.249 116.132 68.148 1.00 37.58 N
ATOM 24 C4 G B1313 30.373 115.721 67.534 1.00 39.11 C
ATOM 25 P A B1314 32.806 121.293 70.563 1.00 40.81 P
ATOM 26 OP1 A B1314 31.603 121.797 71.292 1.00 38.84 O
ATOM 27 OP2 A B1314 33.486 122.165 69.567 1.00 38.84 O
ATOM 28 O5' A B1314 33.870 120.797 71.638 1.00 38.38 O
TER
ATOM 2 P C A1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 3 OP1 C A1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 4 OP2 C A1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 5 O5' C A1312 36.540 117.658 60.975 1.00 52.08 O
ATOM 6 C5' C A1312 35.773 118.857 61.136 1.00 47.64 C
ATOM 7 C4' C A1312 34.513 118.558 61.888 1.00 43.63 C
ATOM 8 O4' C A1312 33.590 117.856 61.034 1.00 41.37 O
ATOM 9 C3' C A1312 34.712 117.634 63.074 1.00 43.74 C
ATOM 10 O3' C A1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 11 C2' C A1312 33.321 117.050 63.258 1.00 42.78 C
ATOM 12 O2' C A1312 32.465 117.947 63.926 1.00 46.43 O
ATOM 13 C1' C A1312 32.859 116.923 61.804 1.00 41.91 C
ATOM 14 N1 C A1312 33.049 115.584 61.231 1.00 38.68 N
ATOM 15 C2 C A1312 32.213 114.556 61.656 1.00 37.71 C
ATOM 16 O2 C A1312 31.342 114.808 62.499 1.00 38.20 O
ATOM 17 N3 C A1312 32.374 113.314 61.139 1.00 36.66 N
ATOM 18 C4 C A1312 33.324 113.092 60.229 1.00 36.67 C
ATOM 19 N4 C A1312 33.453 111.859 59.742 1.00 33.66 N
ATOM 20 C5 C A1312 34.187 114.128 59.776 1.00 37.62 C
ATOM 21 C6 C A1312 34.017 115.346 60.300 1.00 37.41 C
ATOM 22 P G A1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 23 OP1 G A1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 24 OP2 G A1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 25 O5' G A1313 34.748 118.104 66.615 1.00 35.66 O
TER
ATOM 1 O3' C B1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 2 P G B1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 3 OP1 G B1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 4 OP2 G B1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 5 O5' G B1313 34.748 118.104 66.615 1.00 35.66 O
ATOM 6 C5' G B1313 34.263 119.463 66.623 1.00 37.99 C
ATOM 7 C4' G B1313 33.068 119.591 67.526 1.00 38.20 C
ATOM 8 O4' G B1313 32.069 118.650 67.059 1.00 40.34 O
ATOM 9 C3' G B1313 33.313 119.251 68.993 1.00 37.86 C
ATOM 10 O3' G B1313 32.372 119.954 69.791 1.00 38.21 O
ATOM 11 C2' G B1313 32.969 117.769 69.039 1.00 38.69 C
ATOM 12 O2' G B1313 32.542 117.352 70.316 1.00 40.04 O
ATOM 13 C1' G B1313 31.788 117.721 68.079 1.00 39.27 C
ATOM 14 N9 G B1313 31.550 116.418 67.474 1.00 39.01 N
ATOM 15 C8 G B1313 32.427 115.644 66.746 1.00 39.40 C
ATOM 16 N7 G B1313 31.901 114.514 66.347 1.00 39.81 N
ATOM 17 C5 G B1313 30.602 114.550 66.843 1.00 39.91 C
ATOM 18 C6 G B1313 29.549 113.612 66.734 1.00 39.53 C
ATOM 19 O6 G B1313 29.547 112.519 66.147 1.00 41.17 O
ATOM 20 N1 G B1313 28.402 114.055 67.387 1.00 36.60 N
ATOM 21 C2 G B1313 28.281 115.252 68.041 1.00 37.40 C
ATOM 22 N2 G B1313 27.092 115.518 68.591 1.00 39.29 N
ATOM 23 N3 G B1313 29.249 116.132 68.148 1.00 37.58 N
ATOM 24 C4 G B1313 30.373 115.721 67.534 1.00 39.11 C
ATOM 25 P A B1314 32.806 121.293 70.563 1.00 40.81 P
ATOM 26 OP1 A B1314 31.603 121.797 71.292 1.00 38.84 O
ATOM 27 OP2 A B1314 33.486 122.165 69.567 1.00 38.84 O
ATOM 28 O5' A B1314 33.870 120.797 71.638 1.00 38.38 O
TER
Atoms:
C2: (32.213,114.556,61.656)
OP1: (38.891,118.358,61.149)
OP2: (38.217,116.325,59.695)
C4: (33.324,113.092,60.229)
O5': (36.540,117.658,60.975)
C3': (34.712,117.634,63.074)
C1': (32.859,116.923,61.804)
O4': (33.590,117.856,61.034)
C5': (35.773,118.857,61.136)
P: (37.931,117.702,60.214)
O2: (31.342,114.808,62.499)
C4': (34.513,118.558,61.888)
C2': (33.321,117.050,63.258)
O2': (32.465,117.947,63.926)
N1: (33.049,115.584,61.231)
N3: (32.374,113.314,61.139)
N4: (33.453,111.859,59.742)
C6: (34.017,115.346,60.300)
C5: (34.187,114.128,59.776)
O3': (35.163,118.387,64.196)
OP1: (38.891,118.358,61.149)
OP2: (38.217,116.325,59.695)
C4: (33.324,113.092,60.229)
O5': (36.540,117.658,60.975)
C3': (34.712,117.634,63.074)
C1': (32.859,116.923,61.804)
O4': (33.590,117.856,61.034)
C5': (35.773,118.857,61.136)
P: (37.931,117.702,60.214)
O2: (31.342,114.808,62.499)
C4': (34.513,118.558,61.888)
C2': (33.321,117.050,63.258)
O2': (32.465,117.947,63.926)
N1: (33.049,115.584,61.231)
N3: (32.374,113.314,61.139)
N4: (33.453,111.859,59.742)
C6: (34.017,115.346,60.300)
C5: (34.187,114.128,59.776)
O3': (35.163,118.387,64.196)
OP1: (37.061,118.291,65.759)
OP2: (35.699,116.168,65.293)
C3': (33.313,119.251,68.993)
C1': (31.788,117.721,68.079)
C5': (34.263,119.463,66.623)
O6: (29.547,112.519,66.147)
O4': (32.069,118.650,67.059)
C8: (32.427,115.644,66.746)
C2: (28.281,115.252,68.041)
C6: (29.549,113.612,66.734)
C5: (30.602,114.550,66.843)
C4: (30.373,115.721,67.534)
P: (35.760,117.643,65.481)
C4': (33.068,119.591,67.526)
C2': (32.969,117.769,69.039)
O2': (32.542,117.352,70.316)
N1: (28.402,114.055,67.387)
N2: (27.092,115.518,68.591)
N3: (29.249,116.132,68.148)
N7: (31.901,114.514,66.347)
N9: (31.550,116.418,67.474)
O5': (34.748,118.104,66.615)
O3': (32.372,119.954,69.791)
OP2: (35.699,116.168,65.293)
C3': (33.313,119.251,68.993)
C1': (31.788,117.721,68.079)
C5': (34.263,119.463,66.623)
O6: (29.547,112.519,66.147)
O4': (32.069,118.650,67.059)
C8: (32.427,115.644,66.746)
C2: (28.281,115.252,68.041)
C6: (29.549,113.612,66.734)
C5: (30.602,114.550,66.843)
C4: (30.373,115.721,67.534)
P: (35.760,117.643,65.481)
C4': (33.068,119.591,67.526)
C2': (32.969,117.769,69.039)
O2': (32.542,117.352,70.316)
N1: (28.402,114.055,67.387)
N2: (27.092,115.518,68.591)
N3: (29.249,116.132,68.148)
N7: (31.901,114.514,66.347)
N9: (31.550,116.418,67.474)
O5': (34.748,118.104,66.615)
O3': (32.372,119.954,69.791)
Image (generated by PyMOL):