Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2508:A2725
Extra
PDB:
ATOM 1 O3' G A2507 -100.407 -63.641 -44.582 1.00 90.65 O
ATOM 2 P G A2508 -101.712 -63.015 -45.278 1.00 90.32 P
ATOM 3 OP1 G A2508 -101.659 -63.375 -46.711 1.00 87.82 O
ATOM 4 OP2 G A2508 -101.846 -61.590 -44.898 1.00 68.76 O
ATOM 5 O5' G A2508 -102.901 -63.824 -44.575 1.00 89.40 O
ATOM 6 C5' G A2508 -102.918 -65.252 -44.607 1.00 86.29 C
ATOM 7 C4' G A2508 -104.148 -65.819 -43.914 1.00 86.56 C
ATOM 8 O4' G A2508 -103.962 -65.809 -42.474 1.00 80.56 O
ATOM 9 C3' G A2508 -105.449 -65.052 -44.121 1.00 90.94 C
ATOM 10 O3' G A2508 -106.061 -65.377 -45.371 1.00 97.81 O
ATOM 11 C2' G A2508 -106.253 -65.605 -42.955 1.00 91.16 C
ATOM 12 O2' G A2508 -106.661 -66.936 -43.192 1.00101.98 O
ATOM 13 C1' G A2508 -105.211 -65.576 -41.846 1.00 81.53 C
ATOM 14 N9 G A2508 -105.186 -64.290 -41.159 1.00 74.44 N
ATOM 15 C8 G A2508 -104.344 -63.241 -41.423 1.00 78.97 C
ATOM 16 N7 G A2508 -104.543 -62.204 -40.659 1.00 85.09 N
ATOM 17 C5 G A2508 -105.588 -62.586 -39.834 1.00 78.81 C
ATOM 18 C6 G A2508 -106.228 -61.860 -38.808 1.00 84.20 C
ATOM 19 O6 G A2508 -105.979 -60.706 -38.429 1.00 98.60 O
ATOM 20 N1 G A2508 -107.241 -62.602 -38.209 1.00 76.56 N
ATOM 21 C2 G A2508 -107.581 -63.880 -38.570 1.00 77.63 C
ATOM 22 N2 G A2508 -108.585 -64.431 -37.880 1.00 76.36 N
ATOM 23 N3 G A2508 -106.988 -64.572 -39.537 1.00 79.24 N
ATOM 24 C4 G A2508 -105.999 -63.865 -40.128 1.00 76.86 C
ATOM 25 P G A2509 -107.061 -64.360 -46.126 1.00102.30 P
ATOM 26 OP1 G A2509 -107.492 -65.069 -47.354 1.00100.23 O
ATOM 27 OP2 G A2509 -106.418 -63.030 -46.243 1.00 93.58 O
ATOM 28 O5' G A2509 -108.308 -64.202 -45.122 1.00 76.27 O
TER
ATOM 1 O3' U B2724 -109.612 -77.858 -37.941 1.00 70.29 O
ATOM 2 P A B2725 -110.631 -76.642 -38.241 1.00 94.66 P
ATOM 3 OP1 A B2725 -111.886 -76.893 -37.496 1.00106.85 O
ATOM 4 OP2 A B2725 -110.696 -76.478 -39.705 1.00 90.23 O
ATOM 5 O5' A B2725 -109.941 -75.345 -37.608 1.00 85.99 O
ATOM 6 C5' A B2725 -109.691 -75.276 -36.207 1.00 80.39 C
ATOM 7 C4' A B2725 -109.279 -73.878 -35.751 1.00 86.77 C
ATOM 8 O4' A B2725 -107.912 -73.549 -36.141 1.00 80.58 O
ATOM 9 C3' A B2725 -110.149 -72.750 -36.289 1.00 83.46 C
ATOM 10 O3' A B2725 -111.285 -72.598 -35.436 1.00 95.08 O
ATOM 11 C2' A B2725 -109.199 -71.564 -36.172 1.00 75.02 C
ATOM 12 O2' A B2725 -109.179 -71.040 -34.860 1.00 78.28 O
ATOM 13 C1' A B2725 -107.827 -72.173 -36.463 1.00 72.73 C
ATOM 14 N9 A B2725 -107.365 -71.980 -37.843 1.00 71.52 N
ATOM 15 C8 A B2725 -107.282 -72.918 -38.827 1.00 80.25 C
ATOM 16 N7 A B2725 -106.826 -72.466 -39.969 1.00 80.24 N
ATOM 17 C5 A B2725 -106.593 -71.131 -39.723 1.00 79.80 C
ATOM 18 C6 A B2725 -106.105 -70.096 -40.537 1.00 84.44 C
ATOM 19 N6 A B2725 -105.761 -70.276 -41.813 1.00 91.98 N
ATOM 20 N1 A B2725 -105.984 -68.870 -39.995 1.00 83.88 N
ATOM 21 C2 A B2725 -106.333 -68.699 -38.716 1.00 82.38 C
ATOM 22 N3 A B2725 -106.808 -69.596 -37.854 1.00 87.82 N
ATOM 23 C4 A B2725 -106.918 -70.809 -38.422 1.00 83.25 C
ATOM 24 P A B2726 -112.781 -72.633 -36.006 1.00104.54 P
ATOM 25 OP1 A B2726 -113.701 -72.941 -34.882 1.00 76.50 O
ATOM 26 OP2 A B2726 -112.789 -73.445 -37.243 1.00105.35 O
ATOM 27 O5' A B2726 -113.010 -71.112 -36.413 1.00 86.58 O
TER
ATOM 2 P G A2508 -101.712 -63.015 -45.278 1.00 90.32 P
ATOM 3 OP1 G A2508 -101.659 -63.375 -46.711 1.00 87.82 O
ATOM 4 OP2 G A2508 -101.846 -61.590 -44.898 1.00 68.76 O
ATOM 5 O5' G A2508 -102.901 -63.824 -44.575 1.00 89.40 O
ATOM 6 C5' G A2508 -102.918 -65.252 -44.607 1.00 86.29 C
ATOM 7 C4' G A2508 -104.148 -65.819 -43.914 1.00 86.56 C
ATOM 8 O4' G A2508 -103.962 -65.809 -42.474 1.00 80.56 O
ATOM 9 C3' G A2508 -105.449 -65.052 -44.121 1.00 90.94 C
ATOM 10 O3' G A2508 -106.061 -65.377 -45.371 1.00 97.81 O
ATOM 11 C2' G A2508 -106.253 -65.605 -42.955 1.00 91.16 C
ATOM 12 O2' G A2508 -106.661 -66.936 -43.192 1.00101.98 O
ATOM 13 C1' G A2508 -105.211 -65.576 -41.846 1.00 81.53 C
ATOM 14 N9 G A2508 -105.186 -64.290 -41.159 1.00 74.44 N
ATOM 15 C8 G A2508 -104.344 -63.241 -41.423 1.00 78.97 C
ATOM 16 N7 G A2508 -104.543 -62.204 -40.659 1.00 85.09 N
ATOM 17 C5 G A2508 -105.588 -62.586 -39.834 1.00 78.81 C
ATOM 18 C6 G A2508 -106.228 -61.860 -38.808 1.00 84.20 C
ATOM 19 O6 G A2508 -105.979 -60.706 -38.429 1.00 98.60 O
ATOM 20 N1 G A2508 -107.241 -62.602 -38.209 1.00 76.56 N
ATOM 21 C2 G A2508 -107.581 -63.880 -38.570 1.00 77.63 C
ATOM 22 N2 G A2508 -108.585 -64.431 -37.880 1.00 76.36 N
ATOM 23 N3 G A2508 -106.988 -64.572 -39.537 1.00 79.24 N
ATOM 24 C4 G A2508 -105.999 -63.865 -40.128 1.00 76.86 C
ATOM 25 P G A2509 -107.061 -64.360 -46.126 1.00102.30 P
ATOM 26 OP1 G A2509 -107.492 -65.069 -47.354 1.00100.23 O
ATOM 27 OP2 G A2509 -106.418 -63.030 -46.243 1.00 93.58 O
ATOM 28 O5' G A2509 -108.308 -64.202 -45.122 1.00 76.27 O
TER
ATOM 1 O3' U B2724 -109.612 -77.858 -37.941 1.00 70.29 O
ATOM 2 P A B2725 -110.631 -76.642 -38.241 1.00 94.66 P
ATOM 3 OP1 A B2725 -111.886 -76.893 -37.496 1.00106.85 O
ATOM 4 OP2 A B2725 -110.696 -76.478 -39.705 1.00 90.23 O
ATOM 5 O5' A B2725 -109.941 -75.345 -37.608 1.00 85.99 O
ATOM 6 C5' A B2725 -109.691 -75.276 -36.207 1.00 80.39 C
ATOM 7 C4' A B2725 -109.279 -73.878 -35.751 1.00 86.77 C
ATOM 8 O4' A B2725 -107.912 -73.549 -36.141 1.00 80.58 O
ATOM 9 C3' A B2725 -110.149 -72.750 -36.289 1.00 83.46 C
ATOM 10 O3' A B2725 -111.285 -72.598 -35.436 1.00 95.08 O
ATOM 11 C2' A B2725 -109.199 -71.564 -36.172 1.00 75.02 C
ATOM 12 O2' A B2725 -109.179 -71.040 -34.860 1.00 78.28 O
ATOM 13 C1' A B2725 -107.827 -72.173 -36.463 1.00 72.73 C
ATOM 14 N9 A B2725 -107.365 -71.980 -37.843 1.00 71.52 N
ATOM 15 C8 A B2725 -107.282 -72.918 -38.827 1.00 80.25 C
ATOM 16 N7 A B2725 -106.826 -72.466 -39.969 1.00 80.24 N
ATOM 17 C5 A B2725 -106.593 -71.131 -39.723 1.00 79.80 C
ATOM 18 C6 A B2725 -106.105 -70.096 -40.537 1.00 84.44 C
ATOM 19 N6 A B2725 -105.761 -70.276 -41.813 1.00 91.98 N
ATOM 20 N1 A B2725 -105.984 -68.870 -39.995 1.00 83.88 N
ATOM 21 C2 A B2725 -106.333 -68.699 -38.716 1.00 82.38 C
ATOM 22 N3 A B2725 -106.808 -69.596 -37.854 1.00 87.82 N
ATOM 23 C4 A B2725 -106.918 -70.809 -38.422 1.00 83.25 C
ATOM 24 P A B2726 -112.781 -72.633 -36.006 1.00104.54 P
ATOM 25 OP1 A B2726 -113.701 -72.941 -34.882 1.00 76.50 O
ATOM 26 OP2 A B2726 -112.789 -73.445 -37.243 1.00105.35 O
ATOM 27 O5' A B2726 -113.010 -71.112 -36.413 1.00 86.58 O
TER
Atoms:
OP1: (-101.659,-63.375,-46.711)
OP2: (-101.846,-61.590,-44.898)
C3': (-105.449,-65.052,-44.121)
C1': (-105.211,-65.576,-41.846)
C5': (-102.918,-65.252,-44.607)
O6: (-105.979,-60.706,-38.429)
O4': (-103.962,-65.809,-42.474)
C8: (-104.344,-63.241,-41.423)
C2: (-107.581,-63.880,-38.570)
C6: (-106.228,-61.860,-38.808)
C5: (-105.588,-62.586,-39.834)
C4: (-105.999,-63.865,-40.128)
P: (-101.712,-63.015,-45.278)
C4': (-104.148,-65.819,-43.914)
C2': (-106.253,-65.605,-42.955)
O2': (-106.661,-66.936,-43.192)
N1: (-107.241,-62.602,-38.209)
N2: (-108.585,-64.431,-37.880)
N3: (-106.988,-64.572,-39.537)
N7: (-104.543,-62.204,-40.659)
N9: (-105.186,-64.290,-41.159)
O5': (-102.901,-63.824,-44.575)
O3': (-106.061,-65.377,-45.371)
OP2: (-101.846,-61.590,-44.898)
C3': (-105.449,-65.052,-44.121)
C1': (-105.211,-65.576,-41.846)
C5': (-102.918,-65.252,-44.607)
O6: (-105.979,-60.706,-38.429)
O4': (-103.962,-65.809,-42.474)
C8: (-104.344,-63.241,-41.423)
C2: (-107.581,-63.880,-38.570)
C6: (-106.228,-61.860,-38.808)
C5: (-105.588,-62.586,-39.834)
C4: (-105.999,-63.865,-40.128)
P: (-101.712,-63.015,-45.278)
C4': (-104.148,-65.819,-43.914)
C2': (-106.253,-65.605,-42.955)
O2': (-106.661,-66.936,-43.192)
N1: (-107.241,-62.602,-38.209)
N2: (-108.585,-64.431,-37.880)
N3: (-106.988,-64.572,-39.537)
N7: (-104.543,-62.204,-40.659)
N9: (-105.186,-64.290,-41.159)
O5': (-102.901,-63.824,-44.575)
O3': (-106.061,-65.377,-45.371)
OP1: (-111.886,-76.893,-37.496)
OP2: (-110.696,-76.478,-39.705)
C3': (-110.149,-72.750,-36.289)
C1': (-107.827,-72.173,-36.463)
C5': (-109.691,-75.276,-36.207)
O4': (-107.912,-73.549,-36.141)
C8: (-107.282,-72.918,-38.827)
O2': (-109.179,-71.040,-34.860)
C6: (-106.105,-70.096,-40.537)
C5: (-106.593,-71.131,-39.723)
C4: (-106.918,-70.809,-38.422)
P: (-110.631,-76.642,-38.241)
C4': (-109.279,-73.878,-35.751)
C2': (-109.199,-71.564,-36.172)
C2: (-106.333,-68.699,-38.716)
N1: (-105.984,-68.870,-39.995)
N3: (-106.808,-69.596,-37.854)
N6: (-105.761,-70.276,-41.813)
N7: (-106.826,-72.466,-39.969)
N9: (-107.365,-71.980,-37.843)
O5': (-109.941,-75.345,-37.608)
O3': (-111.285,-72.598,-35.436)
OP2: (-110.696,-76.478,-39.705)
C3': (-110.149,-72.750,-36.289)
C1': (-107.827,-72.173,-36.463)
C5': (-109.691,-75.276,-36.207)
O4': (-107.912,-73.549,-36.141)
C8: (-107.282,-72.918,-38.827)
O2': (-109.179,-71.040,-34.860)
C6: (-106.105,-70.096,-40.537)
C5: (-106.593,-71.131,-39.723)
C4: (-106.918,-70.809,-38.422)
P: (-110.631,-76.642,-38.241)
C4': (-109.279,-73.878,-35.751)
C2': (-109.199,-71.564,-36.172)
C2: (-106.333,-68.699,-38.716)
N1: (-105.984,-68.870,-39.995)
N3: (-106.808,-69.596,-37.854)
N6: (-105.761,-70.276,-41.813)
N7: (-106.826,-72.466,-39.969)
N9: (-107.365,-71.980,-37.843)
O5': (-109.941,-75.345,-37.608)
O3': (-111.285,-72.598,-35.436)
Image (generated by PyMOL):