ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01963:01964

Extra

PDB:
ATOM 1 O3' U A1962 114.694 132.516 105.416 1.00 66.34 O
ATOM 2 P U A1963 113.503 133.528 105.781 1.00 66.30 P
ATOM 3 OP1 U A1963 113.697 133.966 107.186 1.00 66.10 O
ATOM 4 OP2 U A1963 112.215 132.906 105.383 1.00 66.39 O
ATOM 5 O5' U A1963 113.783 134.764 104.814 1.00 66.38 O
ATOM 6 C5' U A1963 115.055 135.444 104.850 1.00 65.75 C
ATOM 7 C4' U A1963 115.257 136.261 103.598 1.00 65.55 C
ATOM 8 O4' U A1963 115.290 135.384 102.441 1.00 65.72 O
ATOM 9 C3' U A1963 114.155 137.251 103.279 1.00 65.15 C
ATOM 10 O3' U A1963 114.277 138.455 104.027 1.00 62.75 O
ATOM 11 C2' U A1963 114.330 137.459 101.779 1.00 66.56 C
ATOM 12 O2' U A1963 115.350 138.380 101.443 1.00 66.65 O
ATOM 13 C1' U A1963 114.719 136.047 101.326 1.00 67.24 C
ATOM 14 N1 U A1963 113.567 135.261 100.855 1.00 70.29 N
ATOM 15 C2 U A1963 113.230 135.355 99.507 1.00 71.53 C
ATOM 16 O2 U A1963 113.866 136.022 98.706 1.00 72.11 O
ATOM 17 N3 U A1963 112.120 134.634 99.133 1.00 72.52 N
ATOM 18 C4 U A1963 111.331 133.838 99.943 1.00 73.02 C
ATOM 19 O4 U A1963 110.324 133.302 99.467 1.00 73.58 O
ATOM 20 C5 U A1963 111.755 133.771 101.317 1.00 72.64 C
ATOM 21 C6 U A1963 112.830 134.467 101.715 1.00 71.24 C
ATOM 22 P A A1964 112.954 139.285 104.408 1.00 61.31 P
ATOM 23 OP1 A A1964 112.813 139.296 105.889 1.00 59.77 O
ATOM 24 OP2 A A1964 111.842 138.762 103.569 1.00 63.03 O
ATOM 25 O5' A A1964 113.262 140.767 103.907 1.00 58.29 O
TER

ATOM 1 O3' U B1963 114.277 138.455 104.027 1.00 62.75 O
ATOM 2 P A B1964 112.954 139.285 104.408 1.00 61.31 P
ATOM 3 OP1 A B1964 112.813 139.296 105.889 1.00 59.77 O
ATOM 4 OP2 A B1964 111.842 138.762 103.569 1.00 63.03 O
ATOM 5 O5' A B1964 113.262 140.767 103.907 1.00 58.29 O
ATOM 6 C5' A B1964 114.238 141.594 104.563 1.00 53.22 C
ATOM 7 C4' A B1964 114.727 142.655 103.616 1.00 49.34 C
ATOM 8 O4' A B1964 115.370 142.013 102.488 1.00 50.56 O
ATOM 9 C3' A B1964 113.632 143.491 102.989 1.00 48.44 C
ATOM 10 O3' A B1964 113.252 144.547 103.850 1.00 47.58 O
ATOM 11 C2' A B1964 114.281 143.973 101.700 1.00 48.85 C
ATOM 12 O2' A B1964 115.151 145.065 101.894 1.00 48.35 O
ATOM 13 C1' A B1964 115.100 142.742 101.301 1.00 50.34 C
ATOM 14 N9 A B1964 114.390 141.860 100.379 1.00 51.33 N
ATOM 15 C8 A B1964 113.696 140.715 100.680 1.00 52.20 C
ATOM 16 N7 A B1964 113.115 140.162 99.646 1.00 53.26 N
ATOM 17 C5 A B1964 113.456 140.994 98.589 1.00 52.89 C
ATOM 18 C6 A B1964 113.136 140.963 97.220 1.00 53.55 C
ATOM 19 N6 A B1964 112.338 140.046 96.669 1.00 53.97 N
ATOM 20 N1 A B1964 113.661 141.927 96.430 1.00 53.85 N
ATOM 21 C2 A B1964 114.435 142.864 96.992 1.00 53.14 C
ATOM 22 N3 A B1964 114.790 143.009 98.269 1.00 52.94 N
ATOM 23 C4 A B1964 114.260 142.031 99.023 1.00 52.01 C
ATOM 24 P A B1965 111.755 145.119 103.794 1.00 48.74 P
ATOM 25 OP1 A B1965 111.723 146.368 104.599 1.00 50.28 O
ATOM 26 OP2 A B1965 110.813 144.024 104.118 1.00 49.20 O
ATOM 27 O5' A B1965 111.559 145.514 102.265 1.00 46.13 O
TER

Atoms:
C4: (111.331,133.838,99.943)
N3: (112.120,134.634,99.133)
OP1: (113.697,133.966,107.186)
OP2: (112.215,132.906,105.383)
C2: (113.230,135.355,99.507)
C1': (114.719,136.047,101.326)
C3': (114.155,137.251,103.279)
O5': (113.783,134.764,104.814)
O4': (115.290,135.384,102.441)
C5': (115.055,135.444,104.850)
P: (113.503,133.528,105.781)
C4': (115.257,136.261,103.598)
C2': (114.330,137.459,101.779)
O2': (115.350,138.380,101.443)
N1: (113.567,135.261,100.855)
O4: (110.324,133.302,99.467)
O2: (113.866,136.022,98.706)
C6: (112.830,134.467,101.715)
C5: (111.755,133.771,101.317)
O3': (114.277,138.455,104.027)
OP1: (112.813,139.296,105.889)
OP2: (111.842,138.762,103.569)
C3': (113.632,143.491,102.989)
C1': (115.100,142.742,101.301)
C5': (114.238,141.594,104.563)
O4': (115.370,142.013,102.488)
C8: (113.696,140.715,100.680)
O2': (115.151,145.065,101.894)
C6: (113.136,140.963,97.220)
C5: (113.456,140.994,98.589)
C4: (114.260,142.031,99.023)
P: (112.954,139.285,104.408)
C4': (114.727,142.655,103.616)
C2': (114.281,143.973,101.700)
C2: (114.435,142.864,96.992)
N1: (113.661,141.927,96.430)
N3: (114.790,143.009,98.269)
N6: (112.338,140.046,96.669)
N7: (113.115,140.162,99.646)
N9: (114.390,141.860,100.379)
O5': (113.262,140.767,103.907)
O3': (113.252,144.547,103.850)
Image (generated by PyMOL):
PyMOL image
show in jmol