Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01312:01313
Extra
PDB:
ATOM 1 O3' A A1311 37.469 118.635 58.738 1.00 54.02 O
ATOM 2 P C A1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 3 OP1 C A1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 4 OP2 C A1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 5 O5' C A1312 36.346 117.480 60.609 1.00 51.22 O
ATOM 6 C5' C A1312 35.552 118.670 60.777 1.00 45.07 C
ATOM 7 C4' C A1312 34.316 118.362 61.567 1.00 40.67 C
ATOM 8 O4' C A1312 33.358 117.674 60.738 1.00 38.77 O
ATOM 9 C3' C A1312 34.539 117.442 62.750 1.00 39.71 C
ATOM 10 O3' C A1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 11 C2' C A1312 33.151 116.856 62.962 1.00 39.39 C
ATOM 12 O2' C A1312 32.298 117.747 63.642 1.00 43.69 O
ATOM 13 C1' C A1312 32.650 116.733 61.521 1.00 38.71 C
ATOM 14 N1 C A1312 32.815 115.400 60.920 1.00 36.89 N
ATOM 15 C2 C A1312 31.982 114.367 61.342 1.00 35.62 C
ATOM 16 O2 C A1312 31.160 114.591 62.240 1.00 35.70 O
ATOM 17 N3 C A1312 32.094 113.149 60.767 1.00 36.54 N
ATOM 18 C4 C A1312 33.001 112.943 59.810 1.00 37.33 C
ATOM 19 N4 C A1312 33.055 111.734 59.243 1.00 35.26 N
ATOM 20 C5 C A1312 33.886 113.972 59.380 1.00 38.47 C
ATOM 21 C6 C A1312 33.758 115.174 59.955 1.00 37.96 C
ATOM 22 P G A1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 23 OP1 G A1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 24 OP2 G A1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 25 O5' G A1313 34.457 117.923 66.259 1.00 34.72 O
TER
ATOM 1 O3' C B1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 2 P G B1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 3 OP1 G B1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 4 OP2 G B1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 5 O5' G B1313 34.457 117.923 66.259 1.00 34.72 O
ATOM 6 C5' G B1313 33.965 119.278 66.274 1.00 35.33 C
ATOM 7 C4' G B1313 32.799 119.390 67.214 1.00 36.39 C
ATOM 8 O4' G B1313 31.802 118.425 66.795 1.00 39.01 O
ATOM 9 C3' G B1313 33.094 119.063 68.673 1.00 36.82 C
ATOM 10 O3' G B1313 32.162 119.758 69.489 1.00 36.17 O
ATOM 11 C2' G B1313 32.781 117.578 68.747 1.00 36.98 C
ATOM 12 O2' G B1313 32.430 117.183 70.055 1.00 40.24 O
ATOM 13 C1' G B1313 31.567 117.500 67.833 1.00 37.46 C
ATOM 14 N9 G B1313 31.327 116.194 67.236 1.00 37.07 N
ATOM 15 C8 G B1313 32.199 115.433 66.495 1.00 37.35 C
ATOM 16 N7 G B1313 31.674 114.310 66.083 1.00 37.45 N
ATOM 17 C5 G B1313 30.381 114.330 66.589 1.00 37.21 C
ATOM 18 C6 G B1313 29.333 113.387 66.472 1.00 36.57 C
ATOM 19 O6 G B1313 29.333 112.315 65.868 1.00 36.51 O
ATOM 20 N1 G B1313 28.191 113.803 67.144 1.00 35.60 N
ATOM 21 C2 G B1313 28.068 114.984 67.828 1.00 35.96 C
ATOM 22 N2 G B1313 26.890 115.208 68.409 1.00 36.35 N
ATOM 23 N3 G B1313 29.029 115.879 67.936 1.00 35.32 N
ATOM 24 C4 G B1313 30.153 115.487 67.302 1.00 36.77 C
ATOM 25 P A B1314 32.612 121.091 70.250 1.00 36.72 P
ATOM 26 OP1 A B1314 31.439 121.678 70.945 1.00 36.01 O
ATOM 27 OP2 A B1314 33.346 121.895 69.241 1.00 36.70 O
ATOM 28 O5' A B1314 33.635 120.565 71.347 1.00 34.82 O
TER
ATOM 2 P C A1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 3 OP1 C A1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 4 OP2 C A1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 5 O5' C A1312 36.346 117.480 60.609 1.00 51.22 O
ATOM 6 C5' C A1312 35.552 118.670 60.777 1.00 45.07 C
ATOM 7 C4' C A1312 34.316 118.362 61.567 1.00 40.67 C
ATOM 8 O4' C A1312 33.358 117.674 60.738 1.00 38.77 O
ATOM 9 C3' C A1312 34.539 117.442 62.750 1.00 39.71 C
ATOM 10 O3' C A1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 11 C2' C A1312 33.151 116.856 62.962 1.00 39.39 C
ATOM 12 O2' C A1312 32.298 117.747 63.642 1.00 43.69 O
ATOM 13 C1' C A1312 32.650 116.733 61.521 1.00 38.71 C
ATOM 14 N1 C A1312 32.815 115.400 60.920 1.00 36.89 N
ATOM 15 C2 C A1312 31.982 114.367 61.342 1.00 35.62 C
ATOM 16 O2 C A1312 31.160 114.591 62.240 1.00 35.70 O
ATOM 17 N3 C A1312 32.094 113.149 60.767 1.00 36.54 N
ATOM 18 C4 C A1312 33.001 112.943 59.810 1.00 37.33 C
ATOM 19 N4 C A1312 33.055 111.734 59.243 1.00 35.26 N
ATOM 20 C5 C A1312 33.886 113.972 59.380 1.00 38.47 C
ATOM 21 C6 C A1312 33.758 115.174 59.955 1.00 37.96 C
ATOM 22 P G A1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 23 OP1 G A1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 24 OP2 G A1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 25 O5' G A1313 34.457 117.923 66.259 1.00 34.72 O
TER
ATOM 1 O3' C B1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 2 P G B1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 3 OP1 G B1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 4 OP2 G B1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 5 O5' G B1313 34.457 117.923 66.259 1.00 34.72 O
ATOM 6 C5' G B1313 33.965 119.278 66.274 1.00 35.33 C
ATOM 7 C4' G B1313 32.799 119.390 67.214 1.00 36.39 C
ATOM 8 O4' G B1313 31.802 118.425 66.795 1.00 39.01 O
ATOM 9 C3' G B1313 33.094 119.063 68.673 1.00 36.82 C
ATOM 10 O3' G B1313 32.162 119.758 69.489 1.00 36.17 O
ATOM 11 C2' G B1313 32.781 117.578 68.747 1.00 36.98 C
ATOM 12 O2' G B1313 32.430 117.183 70.055 1.00 40.24 O
ATOM 13 C1' G B1313 31.567 117.500 67.833 1.00 37.46 C
ATOM 14 N9 G B1313 31.327 116.194 67.236 1.00 37.07 N
ATOM 15 C8 G B1313 32.199 115.433 66.495 1.00 37.35 C
ATOM 16 N7 G B1313 31.674 114.310 66.083 1.00 37.45 N
ATOM 17 C5 G B1313 30.381 114.330 66.589 1.00 37.21 C
ATOM 18 C6 G B1313 29.333 113.387 66.472 1.00 36.57 C
ATOM 19 O6 G B1313 29.333 112.315 65.868 1.00 36.51 O
ATOM 20 N1 G B1313 28.191 113.803 67.144 1.00 35.60 N
ATOM 21 C2 G B1313 28.068 114.984 67.828 1.00 35.96 C
ATOM 22 N2 G B1313 26.890 115.208 68.409 1.00 36.35 N
ATOM 23 N3 G B1313 29.029 115.879 67.936 1.00 35.32 N
ATOM 24 C4 G B1313 30.153 115.487 67.302 1.00 36.77 C
ATOM 25 P A B1314 32.612 121.091 70.250 1.00 36.72 P
ATOM 26 OP1 A B1314 31.439 121.678 70.945 1.00 36.01 O
ATOM 27 OP2 A B1314 33.346 121.895 69.241 1.00 36.70 O
ATOM 28 O5' A B1314 33.635 120.565 71.347 1.00 34.82 O
TER
Atoms:
C2: (31.982,114.367,61.342)
OP1: (38.686,118.212,60.923)
OP2: (38.114,116.241,59.363)
C4: (33.001,112.943,59.810)
O5': (36.346,117.480,60.609)
C3': (34.539,117.442,62.750)
C1': (32.650,116.733,61.521)
O4': (33.358,117.674,60.738)
C5': (35.552,118.670,60.777)
P: (37.776,117.579,59.923)
O2: (31.160,114.591,62.240)
C4': (34.316,118.362,61.567)
C2': (33.151,116.856,62.962)
O2': (32.298,117.747,63.642)
N1: (32.815,115.400,60.920)
N3: (32.094,113.149,60.767)
N4: (33.055,111.734,59.243)
C6: (33.758,115.174,59.955)
C5: (33.886,113.972,59.380)
O3': (35.016,118.204,63.855)
OP1: (38.686,118.212,60.923)
OP2: (38.114,116.241,59.363)
C4: (33.001,112.943,59.810)
O5': (36.346,117.480,60.609)
C3': (34.539,117.442,62.750)
C1': (32.650,116.733,61.521)
O4': (33.358,117.674,60.738)
C5': (35.552,118.670,60.777)
P: (37.776,117.579,59.923)
O2: (31.160,114.591,62.240)
C4': (34.316,118.362,61.567)
C2': (33.151,116.856,62.962)
O2': (32.298,117.747,63.642)
N1: (32.815,115.400,60.920)
N3: (32.094,113.149,60.767)
N4: (33.055,111.734,59.243)
C6: (33.758,115.174,59.955)
C5: (33.886,113.972,59.380)
O3': (35.016,118.204,63.855)
OP1: (36.827,118.106,65.545)
OP2: (35.468,115.998,65.006)
C3': (33.094,119.063,68.673)
C1': (31.567,117.500,67.833)
C5': (33.965,119.278,66.274)
O6: (29.333,112.315,65.868)
O4': (31.802,118.425,66.795)
C8: (32.199,115.433,66.495)
C2: (28.068,114.984,67.828)
C6: (29.333,113.387,66.472)
C5: (30.381,114.330,66.589)
C4: (30.153,115.487,67.302)
P: (35.536,117.472,65.181)
C4': (32.799,119.390,67.214)
C2': (32.781,117.578,68.747)
O2': (32.430,117.183,70.055)
N1: (28.191,113.803,67.144)
N2: (26.890,115.208,68.409)
N3: (29.029,115.879,67.936)
N7: (31.674,114.310,66.083)
N9: (31.327,116.194,67.236)
O5': (34.457,117.923,66.259)
O3': (32.162,119.758,69.489)
OP2: (35.468,115.998,65.006)
C3': (33.094,119.063,68.673)
C1': (31.567,117.500,67.833)
C5': (33.965,119.278,66.274)
O6: (29.333,112.315,65.868)
O4': (31.802,118.425,66.795)
C8: (32.199,115.433,66.495)
C2: (28.068,114.984,67.828)
C6: (29.333,113.387,66.472)
C5: (30.381,114.330,66.589)
C4: (30.153,115.487,67.302)
P: (35.536,117.472,65.181)
C4': (32.799,119.390,67.214)
C2': (32.781,117.578,68.747)
O2': (32.430,117.183,70.055)
N1: (28.191,113.803,67.144)
N2: (26.890,115.208,68.409)
N3: (29.029,115.879,67.936)
N7: (31.674,114.310,66.083)
N9: (31.327,116.194,67.236)
O5': (34.457,117.923,66.259)
O3': (32.162,119.758,69.489)
Image (generated by PyMOL):