Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1898:A1921
Extra
PDB:
ATOM 1 O3' G A1897 -88.193 -16.711 18.795 1.00 43.70 O
ATOM 2 P G A1898 -88.691 -16.594 17.281 1.00 43.05 P
ATOM 3 OP1 G A1898 -89.402 -17.867 17.002 1.00 48.85 O
ATOM 4 OP2 G A1898 -87.573 -16.182 16.408 1.00 36.29 O
ATOM 5 O5' G A1898 -89.718 -15.364 17.295 1.00 56.57 O
ATOM 6 C5' G A1898 -90.993 -15.494 17.907 1.00 59.11 C
ATOM 7 C4' G A1898 -91.824 -14.241 17.720 1.00 47.83 C
ATOM 8 O4' G A1898 -91.258 -13.168 18.516 1.00 65.76 O
ATOM 9 C3' G A1898 -91.858 -13.703 16.301 1.00 47.32 C
ATOM 10 O3' G A1898 -92.910 -14.289 15.571 1.00 38.74 O
ATOM 11 C2' G A1898 -92.153 -12.229 16.547 1.00 58.11 C
ATOM 12 O2' G A1898 -93.519 -12.005 16.816 1.00 65.97 O
ATOM 13 C1' G A1898 -91.295 -11.963 17.778 1.00 60.95 C
ATOM 14 N9 G A1898 -89.948 -11.614 17.354 1.00 55.28 N
ATOM 15 C8 G A1898 -88.824 -12.414 17.329 1.00 51.55 C
ATOM 16 N7 G A1898 -87.768 -11.797 16.872 1.00 54.14 N
ATOM 17 C5 G A1898 -88.235 -10.520 16.565 1.00 56.82 C
ATOM 18 C6 G A1898 -87.563 -9.408 16.031 1.00 44.81 C
ATOM 19 O6 G A1898 -86.377 -9.345 15.723 1.00 41.81 O
ATOM 20 N1 G A1898 -88.395 -8.303 15.877 1.00 47.39 N
ATOM 21 C2 G A1898 -89.724 -8.283 16.201 1.00 50.28 C
ATOM 22 N2 G A1898 -90.374 -7.136 15.987 1.00 53.25 N
ATOM 23 N3 G A1898 -90.379 -9.318 16.694 1.00 55.59 N
ATOM 24 C4 G A1898 -89.572 -10.393 16.849 1.00 57.90 C
ATOM 25 P C A1899 -92.752 -14.412 13.981 1.00 55.69 P
ATOM 26 OP1 C A1899 -93.963 -15.083 13.461 1.00 46.47 O
ATOM 27 OP2 C A1899 -91.382 -14.921 13.696 1.00 58.37 O
ATOM 28 O5' C A1899 -92.803 -12.903 13.455 1.00 66.21 O
TER
ATOM 1 O3' U B1920 -100.716 -7.604 21.703 1.00 75.40 O
ATOM 2 P A B1921 -100.404 -6.755 23.021 1.00 86.06 P
ATOM 3 OP1 A B1921 -99.594 -7.609 23.915 1.00 73.54 O
ATOM 4 OP2 A B1921 -101.668 -6.189 23.535 1.00 79.10 O
ATOM 5 O5' A B1921 -99.483 -5.574 22.441 1.00 69.48 O
ATOM 6 C5' A B1921 -98.878 -4.640 23.330 1.00 61.84 C
ATOM 7 C4' A B1921 -97.469 -4.285 22.897 1.00 61.43 C
ATOM 8 O4' A B1921 -96.542 -5.299 23.353 1.00 59.55 O
ATOM 9 C3' A B1921 -97.273 -4.180 21.396 1.00 67.23 C
ATOM 10 O3' A B1921 -97.467 -2.835 21.011 1.00 68.16 O
ATOM 11 C2' A B1921 -95.814 -4.589 21.210 1.00 67.24 C
ATOM 12 O2' A B1921 -94.920 -3.494 21.289 1.00 56.98 O
ATOM 13 C1' A B1921 -95.566 -5.554 22.366 1.00 65.22 C
ATOM 14 N9 A B1921 -95.674 -6.951 21.961 1.00 71.08 N
ATOM 15 C8 A B1921 -96.614 -7.855 22.359 1.00 75.46 C
ATOM 16 N7 A B1921 -96.471 -9.044 21.821 1.00 73.64 N
ATOM 17 C5 A B1921 -95.363 -8.909 21.008 1.00 62.67 C
ATOM 18 C6 A B1921 -94.692 -9.811 20.165 1.00 61.92 C
ATOM 19 N6 A B1921 -95.058 -11.079 20.001 1.00 71.72 N
ATOM 20 N1 A B1921 -93.624 -9.365 19.491 1.00 60.26 N
ATOM 21 C2 A B1921 -93.260 -8.093 19.664 1.00 66.69 C
ATOM 22 N3 A B1921 -93.806 -7.150 20.427 1.00 67.61 N
ATOM 23 C4 A B1921 -94.864 -7.628 21.082 1.00 65.16 C
ATOM 24 P A B1922 -98.512 -2.467 19.869 1.00 54.11 P
ATOM 25 OP1 A B1922 -98.871 -1.055 20.103 1.00 73.52 O
ATOM 26 OP2 A B1922 -99.548 -3.521 19.867 1.00 70.54 O
ATOM 27 O5' A B1922 -97.681 -2.576 18.512 1.00 47.70 O
TER
ATOM 2 P G A1898 -88.691 -16.594 17.281 1.00 43.05 P
ATOM 3 OP1 G A1898 -89.402 -17.867 17.002 1.00 48.85 O
ATOM 4 OP2 G A1898 -87.573 -16.182 16.408 1.00 36.29 O
ATOM 5 O5' G A1898 -89.718 -15.364 17.295 1.00 56.57 O
ATOM 6 C5' G A1898 -90.993 -15.494 17.907 1.00 59.11 C
ATOM 7 C4' G A1898 -91.824 -14.241 17.720 1.00 47.83 C
ATOM 8 O4' G A1898 -91.258 -13.168 18.516 1.00 65.76 O
ATOM 9 C3' G A1898 -91.858 -13.703 16.301 1.00 47.32 C
ATOM 10 O3' G A1898 -92.910 -14.289 15.571 1.00 38.74 O
ATOM 11 C2' G A1898 -92.153 -12.229 16.547 1.00 58.11 C
ATOM 12 O2' G A1898 -93.519 -12.005 16.816 1.00 65.97 O
ATOM 13 C1' G A1898 -91.295 -11.963 17.778 1.00 60.95 C
ATOM 14 N9 G A1898 -89.948 -11.614 17.354 1.00 55.28 N
ATOM 15 C8 G A1898 -88.824 -12.414 17.329 1.00 51.55 C
ATOM 16 N7 G A1898 -87.768 -11.797 16.872 1.00 54.14 N
ATOM 17 C5 G A1898 -88.235 -10.520 16.565 1.00 56.82 C
ATOM 18 C6 G A1898 -87.563 -9.408 16.031 1.00 44.81 C
ATOM 19 O6 G A1898 -86.377 -9.345 15.723 1.00 41.81 O
ATOM 20 N1 G A1898 -88.395 -8.303 15.877 1.00 47.39 N
ATOM 21 C2 G A1898 -89.724 -8.283 16.201 1.00 50.28 C
ATOM 22 N2 G A1898 -90.374 -7.136 15.987 1.00 53.25 N
ATOM 23 N3 G A1898 -90.379 -9.318 16.694 1.00 55.59 N
ATOM 24 C4 G A1898 -89.572 -10.393 16.849 1.00 57.90 C
ATOM 25 P C A1899 -92.752 -14.412 13.981 1.00 55.69 P
ATOM 26 OP1 C A1899 -93.963 -15.083 13.461 1.00 46.47 O
ATOM 27 OP2 C A1899 -91.382 -14.921 13.696 1.00 58.37 O
ATOM 28 O5' C A1899 -92.803 -12.903 13.455 1.00 66.21 O
TER
ATOM 1 O3' U B1920 -100.716 -7.604 21.703 1.00 75.40 O
ATOM 2 P A B1921 -100.404 -6.755 23.021 1.00 86.06 P
ATOM 3 OP1 A B1921 -99.594 -7.609 23.915 1.00 73.54 O
ATOM 4 OP2 A B1921 -101.668 -6.189 23.535 1.00 79.10 O
ATOM 5 O5' A B1921 -99.483 -5.574 22.441 1.00 69.48 O
ATOM 6 C5' A B1921 -98.878 -4.640 23.330 1.00 61.84 C
ATOM 7 C4' A B1921 -97.469 -4.285 22.897 1.00 61.43 C
ATOM 8 O4' A B1921 -96.542 -5.299 23.353 1.00 59.55 O
ATOM 9 C3' A B1921 -97.273 -4.180 21.396 1.00 67.23 C
ATOM 10 O3' A B1921 -97.467 -2.835 21.011 1.00 68.16 O
ATOM 11 C2' A B1921 -95.814 -4.589 21.210 1.00 67.24 C
ATOM 12 O2' A B1921 -94.920 -3.494 21.289 1.00 56.98 O
ATOM 13 C1' A B1921 -95.566 -5.554 22.366 1.00 65.22 C
ATOM 14 N9 A B1921 -95.674 -6.951 21.961 1.00 71.08 N
ATOM 15 C8 A B1921 -96.614 -7.855 22.359 1.00 75.46 C
ATOM 16 N7 A B1921 -96.471 -9.044 21.821 1.00 73.64 N
ATOM 17 C5 A B1921 -95.363 -8.909 21.008 1.00 62.67 C
ATOM 18 C6 A B1921 -94.692 -9.811 20.165 1.00 61.92 C
ATOM 19 N6 A B1921 -95.058 -11.079 20.001 1.00 71.72 N
ATOM 20 N1 A B1921 -93.624 -9.365 19.491 1.00 60.26 N
ATOM 21 C2 A B1921 -93.260 -8.093 19.664 1.00 66.69 C
ATOM 22 N3 A B1921 -93.806 -7.150 20.427 1.00 67.61 N
ATOM 23 C4 A B1921 -94.864 -7.628 21.082 1.00 65.16 C
ATOM 24 P A B1922 -98.512 -2.467 19.869 1.00 54.11 P
ATOM 25 OP1 A B1922 -98.871 -1.055 20.103 1.00 73.52 O
ATOM 26 OP2 A B1922 -99.548 -3.521 19.867 1.00 70.54 O
ATOM 27 O5' A B1922 -97.681 -2.576 18.512 1.00 47.70 O
TER
Atoms:
OP1: (-89.402,-17.867,17.002)
OP2: (-87.573,-16.182,16.408)
C3': (-91.858,-13.703,16.301)
C1': (-91.295,-11.963,17.778)
C5': (-90.993,-15.494,17.907)
O6: (-86.377,-9.345,15.723)
O4': (-91.258,-13.168,18.516)
C8: (-88.824,-12.414,17.329)
C2: (-89.724,-8.283,16.201)
C6: (-87.563,-9.408,16.031)
C5: (-88.235,-10.520,16.565)
C4: (-89.572,-10.393,16.849)
P: (-88.691,-16.594,17.281)
C4': (-91.824,-14.241,17.720)
C2': (-92.153,-12.229,16.547)
O2': (-93.519,-12.005,16.816)
N1: (-88.395,-8.303,15.877)
N2: (-90.374,-7.136,15.987)
N3: (-90.379,-9.318,16.694)
N7: (-87.768,-11.797,16.872)
N9: (-89.948,-11.614,17.354)
O5': (-89.718,-15.364,17.295)
O3': (-92.910,-14.289,15.571)
OP2: (-87.573,-16.182,16.408)
C3': (-91.858,-13.703,16.301)
C1': (-91.295,-11.963,17.778)
C5': (-90.993,-15.494,17.907)
O6: (-86.377,-9.345,15.723)
O4': (-91.258,-13.168,18.516)
C8: (-88.824,-12.414,17.329)
C2: (-89.724,-8.283,16.201)
C6: (-87.563,-9.408,16.031)
C5: (-88.235,-10.520,16.565)
C4: (-89.572,-10.393,16.849)
P: (-88.691,-16.594,17.281)
C4': (-91.824,-14.241,17.720)
C2': (-92.153,-12.229,16.547)
O2': (-93.519,-12.005,16.816)
N1: (-88.395,-8.303,15.877)
N2: (-90.374,-7.136,15.987)
N3: (-90.379,-9.318,16.694)
N7: (-87.768,-11.797,16.872)
N9: (-89.948,-11.614,17.354)
O5': (-89.718,-15.364,17.295)
O3': (-92.910,-14.289,15.571)
OP1: (-99.594,-7.609,23.915)
OP2: (-101.668,-6.189,23.535)
C3': (-97.273,-4.180,21.396)
C1': (-95.566,-5.554,22.366)
C5': (-98.878,-4.640,23.330)
O4': (-96.542,-5.299,23.353)
C8: (-96.614,-7.855,22.359)
O2': (-94.920,-3.494,21.289)
C6: (-94.692,-9.811,20.165)
C5: (-95.363,-8.909,21.008)
C4: (-94.864,-7.628,21.082)
P: (-100.404,-6.755,23.021)
C4': (-97.469,-4.285,22.897)
C2': (-95.814,-4.589,21.210)
C2: (-93.260,-8.093,19.664)
N1: (-93.624,-9.365,19.491)
N3: (-93.806,-7.150,20.427)
N6: (-95.058,-11.079,20.001)
N7: (-96.471,-9.044,21.821)
N9: (-95.674,-6.951,21.961)
O5': (-99.483,-5.574,22.441)
O3': (-97.467,-2.835,21.011)
OP2: (-101.668,-6.189,23.535)
C3': (-97.273,-4.180,21.396)
C1': (-95.566,-5.554,22.366)
C5': (-98.878,-4.640,23.330)
O4': (-96.542,-5.299,23.353)
C8: (-96.614,-7.855,22.359)
O2': (-94.920,-3.494,21.289)
C6: (-94.692,-9.811,20.165)
C5: (-95.363,-8.909,21.008)
C4: (-94.864,-7.628,21.082)
P: (-100.404,-6.755,23.021)
C4': (-97.469,-4.285,22.897)
C2': (-95.814,-4.589,21.210)
C2: (-93.260,-8.093,19.664)
N1: (-93.624,-9.365,19.491)
N3: (-93.806,-7.150,20.427)
N6: (-95.058,-11.079,20.001)
N7: (-96.471,-9.044,21.821)
N9: (-95.674,-6.951,21.961)
O5': (-99.483,-5.574,22.441)
O3': (-97.467,-2.835,21.011)
Image (generated by PyMOL):