Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1388:A1812
Extra
PDB:
ATOM 1 O3' G A1387 -51.273 -38.749 49.489 1.00 33.58 O
ATOM 2 P G A1388 -50.304 -37.749 48.707 1.00 23.54 P
ATOM 3 OP1 G A1388 -50.244 -38.251 47.312 1.00 28.19 O
ATOM 4 OP2 G A1388 -49.054 -37.559 49.488 1.00 33.04 O
ATOM 5 O5' G A1388 -51.112 -36.377 48.726 1.00 43.24 O
ATOM 6 C5' G A1388 -52.103 -36.114 47.764 1.00 38.28 C
ATOM 7 C4' G A1388 -52.571 -34.707 48.022 1.00 26.13 C
ATOM 8 O4' G A1388 -52.887 -34.558 49.428 1.00 31.75 O
ATOM 9 C3' G A1388 -51.476 -33.698 47.802 1.00 29.72 C
ATOM 10 O3' G A1388 -51.461 -33.345 46.456 1.00 31.82 O
ATOM 11 C2' G A1388 -51.955 -32.524 48.634 1.00 40.92 C
ATOM 12 O2' G A1388 -52.913 -31.747 47.928 1.00 34.33 O
ATOM 13 C1' G A1388 -52.547 -33.249 49.845 1.00 44.86 C
ATOM 14 N9 G A1388 -51.601 -33.357 50.954 1.00 46.76 N
ATOM 15 C8 G A1388 -51.035 -34.505 51.456 1.00 44.11 C
ATOM 16 N7 G A1388 -50.227 -34.289 52.458 1.00 42.58 N
ATOM 17 C5 G A1388 -50.256 -32.908 52.625 1.00 46.33 C
ATOM 18 C6 G A1388 -49.579 -32.084 53.550 1.00 53.76 C
ATOM 19 O6 G A1388 -48.786 -32.421 54.438 1.00 67.93 O
ATOM 20 N1 G A1388 -49.886 -30.743 53.384 1.00 48.52 N
ATOM 21 C2 G A1388 -50.739 -30.258 52.439 1.00 45.36 C
ATOM 22 N2 G A1388 -50.908 -28.935 52.435 1.00 46.29 N
ATOM 23 N3 G A1388 -51.380 -31.007 51.561 1.00 46.21 N
ATOM 24 C4 G A1388 -51.093 -32.320 51.711 1.00 46.62 C
ATOM 25 P C A1389 -50.020 -33.160 45.800 1.00 35.75 P
ATOM 26 OP1 C A1389 -50.208 -33.072 44.327 1.00 35.98 O
ATOM 27 OP2 C A1389 -49.186 -34.206 46.435 1.00 49.66 O
ATOM 28 O5' C A1389 -49.438 -31.779 46.356 1.00 41.90 O
TER
ATOM 1 O3' U B1811 -63.407 -27.290 50.078 1.00 37.67 O
ATOM 2 P A B1812 -62.472 -26.251 49.317 1.00 47.14 P
ATOM 3 OP1 A B1812 -63.122 -24.915 49.317 1.00 59.25 O
ATOM 4 OP2 A B1812 -62.106 -26.867 48.016 1.00 44.22 O
ATOM 5 O5' A B1812 -61.200 -26.243 50.300 1.00 42.74 O
ATOM 6 C5' A B1812 -61.365 -25.865 51.661 1.00 43.16 C
ATOM 7 C4' A B1812 -60.088 -25.985 52.479 1.00 40.39 C
ATOM 8 O4' A B1812 -59.700 -27.373 52.558 1.00 52.29 O
ATOM 9 C3' A B1812 -58.875 -25.242 51.942 1.00 36.34 C
ATOM 10 O3' A B1812 -58.754 -24.030 52.675 1.00 42.75 O
ATOM 11 C2' A B1812 -57.701 -26.150 52.289 1.00 44.09 C
ATOM 12 O2' A B1812 -57.184 -25.850 53.566 1.00 58.05 O
ATOM 13 C1' A B1812 -58.308 -27.536 52.374 1.00 46.97 C
ATOM 14 N9 A B1812 -58.100 -28.355 51.193 1.00 44.11 N
ATOM 15 C8 A B1812 -58.789 -28.321 50.017 1.00 60.72 C
ATOM 16 N7 A B1812 -58.382 -29.194 49.130 1.00 55.99 N
ATOM 17 C5 A B1812 -57.357 -29.842 49.779 1.00 50.39 C
ATOM 18 C6 A B1812 -56.511 -30.882 49.382 1.00 55.69 C
ATOM 19 N6 A B1812 -56.587 -31.459 48.181 1.00 61.74 N
ATOM 20 N1 A B1812 -55.590 -31.307 50.267 1.00 54.86 N
ATOM 21 C2 A B1812 -55.546 -30.713 51.466 1.00 56.02 C
ATOM 22 N3 A B1812 -56.291 -29.719 51.955 1.00 48.03 N
ATOM 23 C4 A B1812 -57.179 -29.336 51.046 1.00 41.42 C
ATOM 24 P A B1813 -58.022 -22.730 52.077 1.00 37.25 P
ATOM 25 OP1 A B1813 -58.239 -21.675 53.100 1.00 43.08 O
ATOM 26 OP2 A B1813 -58.465 -22.530 50.673 1.00 50.11 O
ATOM 27 O5' A B1813 -56.465 -23.106 52.058 1.00 38.80 O
TER
ATOM 2 P G A1388 -50.304 -37.749 48.707 1.00 23.54 P
ATOM 3 OP1 G A1388 -50.244 -38.251 47.312 1.00 28.19 O
ATOM 4 OP2 G A1388 -49.054 -37.559 49.488 1.00 33.04 O
ATOM 5 O5' G A1388 -51.112 -36.377 48.726 1.00 43.24 O
ATOM 6 C5' G A1388 -52.103 -36.114 47.764 1.00 38.28 C
ATOM 7 C4' G A1388 -52.571 -34.707 48.022 1.00 26.13 C
ATOM 8 O4' G A1388 -52.887 -34.558 49.428 1.00 31.75 O
ATOM 9 C3' G A1388 -51.476 -33.698 47.802 1.00 29.72 C
ATOM 10 O3' G A1388 -51.461 -33.345 46.456 1.00 31.82 O
ATOM 11 C2' G A1388 -51.955 -32.524 48.634 1.00 40.92 C
ATOM 12 O2' G A1388 -52.913 -31.747 47.928 1.00 34.33 O
ATOM 13 C1' G A1388 -52.547 -33.249 49.845 1.00 44.86 C
ATOM 14 N9 G A1388 -51.601 -33.357 50.954 1.00 46.76 N
ATOM 15 C8 G A1388 -51.035 -34.505 51.456 1.00 44.11 C
ATOM 16 N7 G A1388 -50.227 -34.289 52.458 1.00 42.58 N
ATOM 17 C5 G A1388 -50.256 -32.908 52.625 1.00 46.33 C
ATOM 18 C6 G A1388 -49.579 -32.084 53.550 1.00 53.76 C
ATOM 19 O6 G A1388 -48.786 -32.421 54.438 1.00 67.93 O
ATOM 20 N1 G A1388 -49.886 -30.743 53.384 1.00 48.52 N
ATOM 21 C2 G A1388 -50.739 -30.258 52.439 1.00 45.36 C
ATOM 22 N2 G A1388 -50.908 -28.935 52.435 1.00 46.29 N
ATOM 23 N3 G A1388 -51.380 -31.007 51.561 1.00 46.21 N
ATOM 24 C4 G A1388 -51.093 -32.320 51.711 1.00 46.62 C
ATOM 25 P C A1389 -50.020 -33.160 45.800 1.00 35.75 P
ATOM 26 OP1 C A1389 -50.208 -33.072 44.327 1.00 35.98 O
ATOM 27 OP2 C A1389 -49.186 -34.206 46.435 1.00 49.66 O
ATOM 28 O5' C A1389 -49.438 -31.779 46.356 1.00 41.90 O
TER
ATOM 1 O3' U B1811 -63.407 -27.290 50.078 1.00 37.67 O
ATOM 2 P A B1812 -62.472 -26.251 49.317 1.00 47.14 P
ATOM 3 OP1 A B1812 -63.122 -24.915 49.317 1.00 59.25 O
ATOM 4 OP2 A B1812 -62.106 -26.867 48.016 1.00 44.22 O
ATOM 5 O5' A B1812 -61.200 -26.243 50.300 1.00 42.74 O
ATOM 6 C5' A B1812 -61.365 -25.865 51.661 1.00 43.16 C
ATOM 7 C4' A B1812 -60.088 -25.985 52.479 1.00 40.39 C
ATOM 8 O4' A B1812 -59.700 -27.373 52.558 1.00 52.29 O
ATOM 9 C3' A B1812 -58.875 -25.242 51.942 1.00 36.34 C
ATOM 10 O3' A B1812 -58.754 -24.030 52.675 1.00 42.75 O
ATOM 11 C2' A B1812 -57.701 -26.150 52.289 1.00 44.09 C
ATOM 12 O2' A B1812 -57.184 -25.850 53.566 1.00 58.05 O
ATOM 13 C1' A B1812 -58.308 -27.536 52.374 1.00 46.97 C
ATOM 14 N9 A B1812 -58.100 -28.355 51.193 1.00 44.11 N
ATOM 15 C8 A B1812 -58.789 -28.321 50.017 1.00 60.72 C
ATOM 16 N7 A B1812 -58.382 -29.194 49.130 1.00 55.99 N
ATOM 17 C5 A B1812 -57.357 -29.842 49.779 1.00 50.39 C
ATOM 18 C6 A B1812 -56.511 -30.882 49.382 1.00 55.69 C
ATOM 19 N6 A B1812 -56.587 -31.459 48.181 1.00 61.74 N
ATOM 20 N1 A B1812 -55.590 -31.307 50.267 1.00 54.86 N
ATOM 21 C2 A B1812 -55.546 -30.713 51.466 1.00 56.02 C
ATOM 22 N3 A B1812 -56.291 -29.719 51.955 1.00 48.03 N
ATOM 23 C4 A B1812 -57.179 -29.336 51.046 1.00 41.42 C
ATOM 24 P A B1813 -58.022 -22.730 52.077 1.00 37.25 P
ATOM 25 OP1 A B1813 -58.239 -21.675 53.100 1.00 43.08 O
ATOM 26 OP2 A B1813 -58.465 -22.530 50.673 1.00 50.11 O
ATOM 27 O5' A B1813 -56.465 -23.106 52.058 1.00 38.80 O
TER
Atoms:
OP1: (-50.244,-38.251,47.312)
OP2: (-49.054,-37.559,49.488)
C3': (-51.476,-33.698,47.802)
C1': (-52.547,-33.249,49.845)
C5': (-52.103,-36.114,47.764)
O6: (-48.786,-32.421,54.438)
O4': (-52.887,-34.558,49.428)
C8: (-51.035,-34.505,51.456)
C2: (-50.739,-30.258,52.439)
C6: (-49.579,-32.084,53.550)
C5: (-50.256,-32.908,52.625)
C4: (-51.093,-32.320,51.711)
P: (-50.304,-37.749,48.707)
C4': (-52.571,-34.707,48.022)
C2': (-51.955,-32.524,48.634)
O2': (-52.913,-31.747,47.928)
N1: (-49.886,-30.743,53.384)
N2: (-50.908,-28.935,52.435)
N3: (-51.380,-31.007,51.561)
N7: (-50.227,-34.289,52.458)
N9: (-51.601,-33.357,50.954)
O5': (-51.112,-36.377,48.726)
O3': (-51.461,-33.345,46.456)
OP2: (-49.054,-37.559,49.488)
C3': (-51.476,-33.698,47.802)
C1': (-52.547,-33.249,49.845)
C5': (-52.103,-36.114,47.764)
O6: (-48.786,-32.421,54.438)
O4': (-52.887,-34.558,49.428)
C8: (-51.035,-34.505,51.456)
C2: (-50.739,-30.258,52.439)
C6: (-49.579,-32.084,53.550)
C5: (-50.256,-32.908,52.625)
C4: (-51.093,-32.320,51.711)
P: (-50.304,-37.749,48.707)
C4': (-52.571,-34.707,48.022)
C2': (-51.955,-32.524,48.634)
O2': (-52.913,-31.747,47.928)
N1: (-49.886,-30.743,53.384)
N2: (-50.908,-28.935,52.435)
N3: (-51.380,-31.007,51.561)
N7: (-50.227,-34.289,52.458)
N9: (-51.601,-33.357,50.954)
O5': (-51.112,-36.377,48.726)
O3': (-51.461,-33.345,46.456)
OP1: (-63.122,-24.915,49.317)
OP2: (-62.106,-26.867,48.016)
C3': (-58.875,-25.242,51.942)
C1': (-58.308,-27.536,52.374)
C5': (-61.365,-25.865,51.661)
O4': (-59.700,-27.373,52.558)
C8: (-58.789,-28.321,50.017)
O2': (-57.184,-25.850,53.566)
C6: (-56.511,-30.882,49.382)
C5: (-57.357,-29.842,49.779)
C4: (-57.179,-29.336,51.046)
P: (-62.472,-26.251,49.317)
C4': (-60.088,-25.985,52.479)
C2': (-57.701,-26.150,52.289)
C2: (-55.546,-30.713,51.466)
N1: (-55.590,-31.307,50.267)
N3: (-56.291,-29.719,51.955)
N6: (-56.587,-31.459,48.181)
N7: (-58.382,-29.194,49.130)
N9: (-58.100,-28.355,51.193)
O5': (-61.200,-26.243,50.300)
O3': (-58.754,-24.030,52.675)
OP2: (-62.106,-26.867,48.016)
C3': (-58.875,-25.242,51.942)
C1': (-58.308,-27.536,52.374)
C5': (-61.365,-25.865,51.661)
O4': (-59.700,-27.373,52.558)
C8: (-58.789,-28.321,50.017)
O2': (-57.184,-25.850,53.566)
C6: (-56.511,-30.882,49.382)
C5: (-57.357,-29.842,49.779)
C4: (-57.179,-29.336,51.046)
P: (-62.472,-26.251,49.317)
C4': (-60.088,-25.985,52.479)
C2': (-57.701,-26.150,52.289)
C2: (-55.546,-30.713,51.466)
N1: (-55.590,-31.307,50.267)
N3: (-56.291,-29.719,51.955)
N6: (-56.587,-31.459,48.181)
N7: (-58.382,-29.194,49.130)
N9: (-58.100,-28.355,51.193)
O5': (-61.200,-26.243,50.300)
O3': (-58.754,-24.030,52.675)
Image (generated by PyMOL):