Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.774 79.222 67.858 1.00 47.31 O
ATOM 2 P C A1234 5.045 79.345 66.282 1.00 47.30 P
ATOM 3 OP1 C A1234 4.391 78.170 65.635 1.00 48.07 O
ATOM 4 OP2 C A1234 6.500 79.584 66.071 1.00 46.75 O
ATOM 5 O5' C A1234 4.231 80.651 65.872 1.00 44.45 O
ATOM 6 C5' C A1234 2.805 80.649 65.914 1.00 45.56 C
ATOM 7 C4' C A1234 2.262 82.015 65.585 1.00 46.55 C
ATOM 8 O4' C A1234 2.606 82.948 66.639 1.00 48.52 O
ATOM 9 C3' C A1234 2.810 82.681 64.340 1.00 47.62 C
ATOM 10 O3' C A1234 2.232 82.173 63.150 1.00 48.67 O
ATOM 11 C2' C A1234 2.432 84.130 64.591 1.00 48.82 C
ATOM 12 O2' C A1234 1.056 84.352 64.370 1.00 50.96 O
ATOM 13 C1' C A1234 2.723 84.253 66.090 1.00 48.60 C
ATOM 14 N1 C A1234 4.085 84.763 66.344 1.00 47.73 N
ATOM 15 C2 C A1234 4.309 86.149 66.285 1.00 47.80 C
ATOM 16 O2 C A1234 3.347 86.910 66.073 1.00 48.65 O
ATOM 17 N3 C A1234 5.562 86.623 66.460 1.00 47.66 N
ATOM 18 C4 C A1234 6.567 85.780 66.699 1.00 47.36 C
ATOM 19 N4 C A1234 7.787 86.295 66.856 1.00 47.22 N
ATOM 20 C5 C A1234 6.365 84.370 66.789 1.00 46.88 C
ATOM 21 C6 C A1234 5.121 83.910 66.610 1.00 47.26 C
ATOM 22 P U A1235 3.162 81.932 61.862 1.00 49.74 P
ATOM 23 OP1 U A1235 2.315 81.479 60.726 1.00 52.56 O
ATOM 24 OP2 U A1235 4.306 81.094 62.296 1.00 49.52 O
ATOM 25 O5' U A1235 3.684 83.395 61.502 1.00 51.52 O
TER
ATOM 1 O3' A B1239 7.976 97.890 65.919 1.00 79.05 O
ATOM 2 P C B1240 7.349 97.700 67.390 1.00 78.41 P
ATOM 3 OP1 C B1240 7.366 99.025 68.071 1.00 77.97 O
ATOM 4 OP2 C B1240 7.997 96.528 68.040 1.00 78.92 O
ATOM 5 O5' C B1240 5.830 97.322 67.113 1.00 75.41 O
ATOM 6 C5' C B1240 5.025 96.765 68.153 1.00 71.42 C
ATOM 7 C4' C B1240 3.653 96.433 67.631 1.00 68.36 C
ATOM 8 O4' C B1240 3.753 95.539 66.492 1.00 68.14 O
ATOM 9 C3' C B1240 2.811 95.669 68.627 1.00 66.90 C
ATOM 10 O3' C B1240 2.209 96.560 69.544 1.00 65.80 O
ATOM 11 C2' C B1240 1.813 94.946 67.736 1.00 66.41 C
ATOM 12 O2' C B1240 0.750 95.778 67.315 1.00 66.22 O
ATOM 13 C1' C B1240 2.699 94.586 66.537 1.00 65.83 C
ATOM 14 N1 C B1240 3.295 93.233 66.609 1.00 63.03 N
ATOM 15 C2 C B1240 2.454 92.105 66.512 1.00 62.04 C
ATOM 16 O2 C B1240 1.223 92.269 66.380 1.00 62.17 O
ATOM 17 N3 C B1240 3.003 90.868 66.564 1.00 60.40 N
ATOM 18 C4 C B1240 4.324 90.728 66.706 1.00 59.63 C
ATOM 19 N4 C B1240 4.820 89.488 66.749 1.00 58.71 N
ATOM 20 C5 C B1240 5.196 91.851 66.810 1.00 59.77 C
ATOM 21 C6 C B1240 4.646 93.071 66.760 1.00 60.84 C
ATOM 22 P U B1241 2.208 96.201 71.101 1.00 64.84 P
ATOM 23 OP1 U B1241 1.338 97.205 71.762 1.00 65.96 O
ATOM 24 OP2 U B1241 3.613 96.027 71.557 1.00 63.18 O
ATOM 25 O5' U B1241 1.461 94.797 71.152 1.00 63.64 O
TER
ATOM 2 P C A1234 5.045 79.345 66.282 1.00 47.30 P
ATOM 3 OP1 C A1234 4.391 78.170 65.635 1.00 48.07 O
ATOM 4 OP2 C A1234 6.500 79.584 66.071 1.00 46.75 O
ATOM 5 O5' C A1234 4.231 80.651 65.872 1.00 44.45 O
ATOM 6 C5' C A1234 2.805 80.649 65.914 1.00 45.56 C
ATOM 7 C4' C A1234 2.262 82.015 65.585 1.00 46.55 C
ATOM 8 O4' C A1234 2.606 82.948 66.639 1.00 48.52 O
ATOM 9 C3' C A1234 2.810 82.681 64.340 1.00 47.62 C
ATOM 10 O3' C A1234 2.232 82.173 63.150 1.00 48.67 O
ATOM 11 C2' C A1234 2.432 84.130 64.591 1.00 48.82 C
ATOM 12 O2' C A1234 1.056 84.352 64.370 1.00 50.96 O
ATOM 13 C1' C A1234 2.723 84.253 66.090 1.00 48.60 C
ATOM 14 N1 C A1234 4.085 84.763 66.344 1.00 47.73 N
ATOM 15 C2 C A1234 4.309 86.149 66.285 1.00 47.80 C
ATOM 16 O2 C A1234 3.347 86.910 66.073 1.00 48.65 O
ATOM 17 N3 C A1234 5.562 86.623 66.460 1.00 47.66 N
ATOM 18 C4 C A1234 6.567 85.780 66.699 1.00 47.36 C
ATOM 19 N4 C A1234 7.787 86.295 66.856 1.00 47.22 N
ATOM 20 C5 C A1234 6.365 84.370 66.789 1.00 46.88 C
ATOM 21 C6 C A1234 5.121 83.910 66.610 1.00 47.26 C
ATOM 22 P U A1235 3.162 81.932 61.862 1.00 49.74 P
ATOM 23 OP1 U A1235 2.315 81.479 60.726 1.00 52.56 O
ATOM 24 OP2 U A1235 4.306 81.094 62.296 1.00 49.52 O
ATOM 25 O5' U A1235 3.684 83.395 61.502 1.00 51.52 O
TER
ATOM 1 O3' A B1239 7.976 97.890 65.919 1.00 79.05 O
ATOM 2 P C B1240 7.349 97.700 67.390 1.00 78.41 P
ATOM 3 OP1 C B1240 7.366 99.025 68.071 1.00 77.97 O
ATOM 4 OP2 C B1240 7.997 96.528 68.040 1.00 78.92 O
ATOM 5 O5' C B1240 5.830 97.322 67.113 1.00 75.41 O
ATOM 6 C5' C B1240 5.025 96.765 68.153 1.00 71.42 C
ATOM 7 C4' C B1240 3.653 96.433 67.631 1.00 68.36 C
ATOM 8 O4' C B1240 3.753 95.539 66.492 1.00 68.14 O
ATOM 9 C3' C B1240 2.811 95.669 68.627 1.00 66.90 C
ATOM 10 O3' C B1240 2.209 96.560 69.544 1.00 65.80 O
ATOM 11 C2' C B1240 1.813 94.946 67.736 1.00 66.41 C
ATOM 12 O2' C B1240 0.750 95.778 67.315 1.00 66.22 O
ATOM 13 C1' C B1240 2.699 94.586 66.537 1.00 65.83 C
ATOM 14 N1 C B1240 3.295 93.233 66.609 1.00 63.03 N
ATOM 15 C2 C B1240 2.454 92.105 66.512 1.00 62.04 C
ATOM 16 O2 C B1240 1.223 92.269 66.380 1.00 62.17 O
ATOM 17 N3 C B1240 3.003 90.868 66.564 1.00 60.40 N
ATOM 18 C4 C B1240 4.324 90.728 66.706 1.00 59.63 C
ATOM 19 N4 C B1240 4.820 89.488 66.749 1.00 58.71 N
ATOM 20 C5 C B1240 5.196 91.851 66.810 1.00 59.77 C
ATOM 21 C6 C B1240 4.646 93.071 66.760 1.00 60.84 C
ATOM 22 P U B1241 2.208 96.201 71.101 1.00 64.84 P
ATOM 23 OP1 U B1241 1.338 97.205 71.762 1.00 65.96 O
ATOM 24 OP2 U B1241 3.613 96.027 71.557 1.00 63.18 O
ATOM 25 O5' U B1241 1.461 94.797 71.152 1.00 63.64 O
TER
Atoms:
C2: (4.309,86.149,66.285)
OP1: (4.391,78.170,65.635)
OP2: (6.500,79.584,66.071)
C4: (6.567,85.780,66.699)
O5': (4.231,80.651,65.872)
C3': (2.810,82.681,64.340)
C1': (2.723,84.253,66.090)
O4': (2.606,82.948,66.639)
C5': (2.805,80.649,65.914)
P: (5.045,79.345,66.282)
O2: (3.347,86.910,66.073)
C4': (2.262,82.015,65.585)
C2': (2.432,84.130,64.591)
O2': (1.056,84.352,64.370)
N1: (4.085,84.763,66.344)
N3: (5.562,86.623,66.460)
N4: (7.787,86.295,66.856)
C6: (5.121,83.910,66.610)
C5: (6.365,84.370,66.789)
O3': (2.232,82.173,63.150)
OP1: (4.391,78.170,65.635)
OP2: (6.500,79.584,66.071)
C4: (6.567,85.780,66.699)
O5': (4.231,80.651,65.872)
C3': (2.810,82.681,64.340)
C1': (2.723,84.253,66.090)
O4': (2.606,82.948,66.639)
C5': (2.805,80.649,65.914)
P: (5.045,79.345,66.282)
O2: (3.347,86.910,66.073)
C4': (2.262,82.015,65.585)
C2': (2.432,84.130,64.591)
O2': (1.056,84.352,64.370)
N1: (4.085,84.763,66.344)
N3: (5.562,86.623,66.460)
N4: (7.787,86.295,66.856)
C6: (5.121,83.910,66.610)
C5: (6.365,84.370,66.789)
O3': (2.232,82.173,63.150)
C2: (2.454,92.105,66.512)
OP1: (7.366,99.025,68.071)
OP2: (7.997,96.528,68.040)
C4: (4.324,90.728,66.706)
O5': (5.830,97.322,67.113)
C3': (2.811,95.669,68.627)
C1': (2.699,94.586,66.537)
O4': (3.753,95.539,66.492)
C5': (5.025,96.765,68.153)
P: (7.349,97.700,67.390)
O2: (1.223,92.269,66.380)
C4': (3.653,96.433,67.631)
C2': (1.813,94.946,67.736)
O2': (0.750,95.778,67.315)
N1: (3.295,93.233,66.609)
N3: (3.003,90.868,66.564)
N4: (4.820,89.488,66.749)
C6: (4.646,93.071,66.760)
C5: (5.196,91.851,66.810)
O3': (2.209,96.560,69.544)
OP1: (7.366,99.025,68.071)
OP2: (7.997,96.528,68.040)
C4: (4.324,90.728,66.706)
O5': (5.830,97.322,67.113)
C3': (2.811,95.669,68.627)
C1': (2.699,94.586,66.537)
O4': (3.753,95.539,66.492)
C5': (5.025,96.765,68.153)
P: (7.349,97.700,67.390)
O2: (1.223,92.269,66.380)
C4': (3.653,96.433,67.631)
C2': (1.813,94.946,67.736)
O2': (0.750,95.778,67.315)
N1: (3.295,93.233,66.609)
N3: (3.003,90.868,66.564)
N4: (4.820,89.488,66.749)
C6: (4.646,93.071,66.760)
C5: (5.196,91.851,66.810)
O3': (2.209,96.560,69.544)
Image (generated by PyMOL):