Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0279:0349
Extra
PDB:
ATOM 1 O3' C A 278 60.679 127.720 -1.917 1.00 92.45 O
ATOM 2 P C A 279 59.571 128.194 -0.850 1.00 91.15 P
ATOM 3 OP1 C A 279 59.341 129.644 -1.064 1.00 91.43 O
ATOM 4 OP2 C A 279 59.985 127.712 0.491 1.00 91.82 O
ATOM 5 O5' C A 279 58.252 127.407 -1.284 1.00 90.06 O
ATOM 6 C5' C A 279 57.648 127.629 -2.576 1.00 87.68 C
ATOM 7 C4' C A 279 56.435 126.742 -2.756 1.00 86.39 C
ATOM 8 O4' C A 279 56.838 125.348 -2.777 1.00 85.91 O
ATOM 9 C3' C A 279 55.385 126.819 -1.659 1.00 85.41 C
ATOM 10 O3' C A 279 54.509 127.923 -1.869 1.00 84.90 O
ATOM 11 C2' C A 279 54.665 125.484 -1.805 1.00 85.41 C
ATOM 12 O2' C A 279 53.706 125.483 -2.844 1.00 84.31 O
ATOM 13 C1' C A 279 55.819 124.552 -2.190 1.00 85.54 C
ATOM 14 N1 C A 279 56.399 123.791 -1.064 1.00 85.49 N
ATOM 15 C2 C A 279 55.729 122.642 -0.599 1.00 85.63 C
ATOM 16 O2 C A 279 54.648 122.315 -1.120 1.00 85.63 O
ATOM 17 N3 C A 279 56.275 121.923 0.410 1.00 85.76 N
ATOM 18 C4 C A 279 57.431 122.310 0.958 1.00 85.98 C
ATOM 19 N4 C A 279 57.937 121.563 1.944 1.00 85.74 N
ATOM 20 C5 C A 279 58.122 123.479 0.518 1.00 85.91 C
ATOM 21 C6 C A 279 57.576 124.182 -0.484 1.00 85.90 C
ATOM 22 P G A 280 53.985 128.782 -0.617 1.00 84.49 P
ATOM 23 OP1 G A 280 53.123 129.869 -1.148 1.00 84.19 O
ATOM 24 OP2 G A 280 55.155 129.121 0.233 1.00 84.41 O
ATOM 25 O5' G A 280 53.055 127.768 0.186 1.00 85.43 O
TER
ATOM 1 O3' A B 348 53.324 112.944 4.483 1.00 97.71 O
ATOM 2 P C B 349 54.023 112.624 3.074 1.00 99.83 P
ATOM 3 OP1 C B 349 54.028 111.147 2.914 1.00100.17 O
ATOM 4 OP2 C B 349 55.306 113.374 3.020 1.00 99.99 O
ATOM 5 O5' C B 349 53.027 113.247 1.996 1.00 99.43 O
ATOM 6 C5' C B 349 51.686 112.737 1.844 1.00 99.96 C
ATOM 7 C4' C B 349 50.871 113.648 0.954 1.00100.71 C
ATOM 8 O4' C B 349 50.766 114.962 1.568 1.00100.95 O
ATOM 9 C3' C B 349 51.452 113.936 -0.421 1.00101.17 C
ATOM 10 O3' C B 349 51.198 112.881 -1.346 1.00102.17 O
ATOM 11 C2' C B 349 50.752 115.239 -0.792 1.00100.51 C
ATOM 12 O2' C B 349 49.417 115.050 -1.216 1.00 99.60 O
ATOM 13 C1' C B 349 50.744 115.963 0.557 1.00100.27 C
ATOM 14 N1 C B 349 51.910 116.852 0.743 1.00 99.86 N
ATOM 15 C2 C B 349 51.809 118.199 0.347 1.00 99.75 C
ATOM 16 O2 C B 349 50.740 118.610 -0.138 1.00 99.12 O
ATOM 17 N3 C B 349 52.880 119.015 0.503 1.00 99.63 N
ATOM 18 C4 C B 349 54.012 118.541 1.034 1.00 99.76 C
ATOM 19 N4 C B 349 55.041 119.382 1.172 1.00 99.31 N
ATOM 20 C5 C B 349 54.140 117.182 1.449 1.00 99.57 C
ATOM 21 C6 C B 349 53.077 116.382 1.287 1.00 99.67 C
ATOM 22 P G B 350 52.297 112.519 -2.467 1.00102.99 P
ATOM 23 OP1 G B 350 51.711 111.450 -3.322 1.00102.94 O
ATOM 24 OP2 G B 350 53.607 112.284 -1.795 1.00101.63 O
ATOM 25 O5' G B 350 52.405 113.850 -3.343 1.00102.93 O
TER
ATOM 2 P C A 279 59.571 128.194 -0.850 1.00 91.15 P
ATOM 3 OP1 C A 279 59.341 129.644 -1.064 1.00 91.43 O
ATOM 4 OP2 C A 279 59.985 127.712 0.491 1.00 91.82 O
ATOM 5 O5' C A 279 58.252 127.407 -1.284 1.00 90.06 O
ATOM 6 C5' C A 279 57.648 127.629 -2.576 1.00 87.68 C
ATOM 7 C4' C A 279 56.435 126.742 -2.756 1.00 86.39 C
ATOM 8 O4' C A 279 56.838 125.348 -2.777 1.00 85.91 O
ATOM 9 C3' C A 279 55.385 126.819 -1.659 1.00 85.41 C
ATOM 10 O3' C A 279 54.509 127.923 -1.869 1.00 84.90 O
ATOM 11 C2' C A 279 54.665 125.484 -1.805 1.00 85.41 C
ATOM 12 O2' C A 279 53.706 125.483 -2.844 1.00 84.31 O
ATOM 13 C1' C A 279 55.819 124.552 -2.190 1.00 85.54 C
ATOM 14 N1 C A 279 56.399 123.791 -1.064 1.00 85.49 N
ATOM 15 C2 C A 279 55.729 122.642 -0.599 1.00 85.63 C
ATOM 16 O2 C A 279 54.648 122.315 -1.120 1.00 85.63 O
ATOM 17 N3 C A 279 56.275 121.923 0.410 1.00 85.76 N
ATOM 18 C4 C A 279 57.431 122.310 0.958 1.00 85.98 C
ATOM 19 N4 C A 279 57.937 121.563 1.944 1.00 85.74 N
ATOM 20 C5 C A 279 58.122 123.479 0.518 1.00 85.91 C
ATOM 21 C6 C A 279 57.576 124.182 -0.484 1.00 85.90 C
ATOM 22 P G A 280 53.985 128.782 -0.617 1.00 84.49 P
ATOM 23 OP1 G A 280 53.123 129.869 -1.148 1.00 84.19 O
ATOM 24 OP2 G A 280 55.155 129.121 0.233 1.00 84.41 O
ATOM 25 O5' G A 280 53.055 127.768 0.186 1.00 85.43 O
TER
ATOM 1 O3' A B 348 53.324 112.944 4.483 1.00 97.71 O
ATOM 2 P C B 349 54.023 112.624 3.074 1.00 99.83 P
ATOM 3 OP1 C B 349 54.028 111.147 2.914 1.00100.17 O
ATOM 4 OP2 C B 349 55.306 113.374 3.020 1.00 99.99 O
ATOM 5 O5' C B 349 53.027 113.247 1.996 1.00 99.43 O
ATOM 6 C5' C B 349 51.686 112.737 1.844 1.00 99.96 C
ATOM 7 C4' C B 349 50.871 113.648 0.954 1.00100.71 C
ATOM 8 O4' C B 349 50.766 114.962 1.568 1.00100.95 O
ATOM 9 C3' C B 349 51.452 113.936 -0.421 1.00101.17 C
ATOM 10 O3' C B 349 51.198 112.881 -1.346 1.00102.17 O
ATOM 11 C2' C B 349 50.752 115.239 -0.792 1.00100.51 C
ATOM 12 O2' C B 349 49.417 115.050 -1.216 1.00 99.60 O
ATOM 13 C1' C B 349 50.744 115.963 0.557 1.00100.27 C
ATOM 14 N1 C B 349 51.910 116.852 0.743 1.00 99.86 N
ATOM 15 C2 C B 349 51.809 118.199 0.347 1.00 99.75 C
ATOM 16 O2 C B 349 50.740 118.610 -0.138 1.00 99.12 O
ATOM 17 N3 C B 349 52.880 119.015 0.503 1.00 99.63 N
ATOM 18 C4 C B 349 54.012 118.541 1.034 1.00 99.76 C
ATOM 19 N4 C B 349 55.041 119.382 1.172 1.00 99.31 N
ATOM 20 C5 C B 349 54.140 117.182 1.449 1.00 99.57 C
ATOM 21 C6 C B 349 53.077 116.382 1.287 1.00 99.67 C
ATOM 22 P G B 350 52.297 112.519 -2.467 1.00102.99 P
ATOM 23 OP1 G B 350 51.711 111.450 -3.322 1.00102.94 O
ATOM 24 OP2 G B 350 53.607 112.284 -1.795 1.00101.63 O
ATOM 25 O5' G B 350 52.405 113.850 -3.343 1.00102.93 O
TER
Atoms:
C2: (55.729,122.642,-0.599)
OP1: (59.341,129.644,-1.064)
OP2: (59.985,127.712,0.491)
C4: (57.431,122.310,0.958)
O5': (58.252,127.407,-1.284)
C3': (55.385,126.819,-1.659)
C1': (55.819,124.552,-2.190)
O4': (56.838,125.348,-2.777)
C5': (57.648,127.629,-2.576)
P: (59.571,128.194,-0.850)
O2: (54.648,122.315,-1.120)
C4': (56.435,126.742,-2.756)
C2': (54.665,125.484,-1.805)
O2': (53.706,125.483,-2.844)
N1: (56.399,123.791,-1.064)
N3: (56.275,121.923,0.410)
N4: (57.937,121.563,1.944)
C6: (57.576,124.182,-0.484)
C5: (58.122,123.479,0.518)
O3': (54.509,127.923,-1.869)
OP1: (59.341,129.644,-1.064)
OP2: (59.985,127.712,0.491)
C4: (57.431,122.310,0.958)
O5': (58.252,127.407,-1.284)
C3': (55.385,126.819,-1.659)
C1': (55.819,124.552,-2.190)
O4': (56.838,125.348,-2.777)
C5': (57.648,127.629,-2.576)
P: (59.571,128.194,-0.850)
O2: (54.648,122.315,-1.120)
C4': (56.435,126.742,-2.756)
C2': (54.665,125.484,-1.805)
O2': (53.706,125.483,-2.844)
N1: (56.399,123.791,-1.064)
N3: (56.275,121.923,0.410)
N4: (57.937,121.563,1.944)
C6: (57.576,124.182,-0.484)
C5: (58.122,123.479,0.518)
O3': (54.509,127.923,-1.869)
C2: (51.809,118.199,0.347)
OP1: (54.028,111.147,2.914)
OP2: (55.306,113.374,3.020)
C4: (54.012,118.541,1.034)
O5': (53.027,113.247,1.996)
C3': (51.452,113.936,-0.421)
C1': (50.744,115.963,0.557)
O4': (50.766,114.962,1.568)
C5': (51.686,112.737,1.844)
P: (54.023,112.624,3.074)
O2: (50.740,118.610,-0.138)
C4': (50.871,113.648,0.954)
C2': (50.752,115.239,-0.792)
O2': (49.417,115.050,-1.216)
N1: (51.910,116.852,0.743)
N3: (52.880,119.015,0.503)
N4: (55.041,119.382,1.172)
C6: (53.077,116.382,1.287)
C5: (54.140,117.182,1.449)
O3': (51.198,112.881,-1.346)
OP1: (54.028,111.147,2.914)
OP2: (55.306,113.374,3.020)
C4: (54.012,118.541,1.034)
O5': (53.027,113.247,1.996)
C3': (51.452,113.936,-0.421)
C1': (50.744,115.963,0.557)
O4': (50.766,114.962,1.568)
C5': (51.686,112.737,1.844)
P: (54.023,112.624,3.074)
O2: (50.740,118.610,-0.138)
C4': (50.871,113.648,0.954)
C2': (50.752,115.239,-0.792)
O2': (49.417,115.050,-1.216)
N1: (51.910,116.852,0.743)
N3: (52.880,119.015,0.503)
N4: (55.041,119.382,1.172)
C6: (53.077,116.382,1.287)
C5: (54.140,117.182,1.449)
O3': (51.198,112.881,-1.346)
Image (generated by PyMOL):