ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IRW:R26:R72

Extra

PDB:
ATOM 1 O3' A A 25 -5.018 -24.715 21.624 1.00 48.26 O
ATOM 2 P A A 26 -5.218 -24.598 20.052 1.00 50.24 P
ATOM 3 OP1 A A 26 -6.470 -23.854 19.784 1.00 50.92 O
ATOM 4 OP2 A A 26 -5.005 -25.947 19.480 1.00 50.56 O
ATOM 5 O5' A A 26 -3.995 -23.669 19.633 1.00 46.54 O
ATOM 6 C5' A A 26 -3.936 -22.364 20.140 1.00 43.00 C
ATOM 7 C4' A A 26 -2.519 -21.861 20.031 1.00 41.88 C
ATOM 8 O4' A A 26 -1.639 -22.785 20.712 1.00 40.59 O
ATOM 9 C3' A A 26 -2.004 -21.806 18.610 1.00 41.34 C
ATOM 10 O3' A A 26 -2.348 -20.555 18.048 1.00 42.02 O
ATOM 11 C2' A A 26 -0.500 -21.946 18.815 1.00 41.17 C
ATOM 12 O2' A A 26 0.101 -20.716 19.143 1.00 42.01 O
ATOM 13 C1' A A 26 -0.417 -22.888 20.013 1.00 40.56 C
ATOM 14 N9 A A 26 -0.238 -24.289 19.658 1.00 41.45 N
ATOM 15 C8 A A 26 -1.221 -25.215 19.447 1.00 42.16 C
ATOM 16 N7 A A 26 -0.768 -26.407 19.145 1.00 41.17 N
ATOM 17 C5 A A 26 0.608 -26.251 19.160 1.00 40.74 C
ATOM 18 C6 A A 26 1.668 -27.150 18.923 1.00 40.96 C
ATOM 19 N6 A A 26 1.494 -28.441 18.608 1.00 39.52 N
ATOM 20 N1 A A 26 2.923 -26.667 19.022 1.00 41.14 N
ATOM 21 C2 A A 26 3.095 -25.376 19.334 1.00 41.64 C
ATOM 22 N3 A A 26 2.180 -24.441 19.579 1.00 41.44 N
ATOM 23 C4 A A 26 0.948 -24.950 19.475 1.00 40.46 C
ATOM 24 P A A 27 -2.482 -20.405 16.462 1.00 45.13 P
ATOM 25 OP1 A A 27 -2.845 -19.002 16.166 1.00 47.81 O
ATOM 26 OP2 A A 27 -3.335 -21.501 15.960 1.00 45.29 O
ATOM 27 O5' A A 27 -0.987 -20.667 15.954 1.00 46.11 O
TER

ATOM 1 O3' A B 71 9.144 -33.183 19.524 1.00 55.86 O
ATOM 2 P G B 72 9.449 -33.121 17.958 1.00 57.84 P
ATOM 3 OP1 G B 72 9.026 -34.406 17.363 1.00 58.51 O
ATOM 4 OP2 G B 72 10.832 -32.622 17.778 1.00 57.80 O
ATOM 5 O5' G B 72 8.455 -31.996 17.435 1.00 57.15 O
ATOM 6 C5' G B 72 7.116 -32.339 17.154 1.00 55.74 C
ATOM 7 C4' G B 72 6.287 -31.078 17.123 1.00 55.38 C
ATOM 8 O4' G B 72 6.820 -30.125 18.077 1.00 55.60 O
ATOM 9 C3' G B 72 6.383 -30.299 15.831 1.00 54.57 C
ATOM 10 O3' G B 72 5.618 -30.908 14.824 1.00 52.79 O
ATOM 11 C2' G B 72 5.807 -28.969 16.288 1.00 53.27 C
ATOM 12 O2' G B 72 4.417 -29.067 16.539 1.00 53.14 O
ATOM 13 C1' G B 72 6.568 -28.808 17.602 1.00 52.08 C
ATOM 14 N9 G B 72 7.836 -28.085 17.481 1.00 48.27 N
ATOM 15 C8 G B 72 9.108 -28.575 17.683 1.00 46.23 C
ATOM 16 N7 G B 72 10.043 -27.680 17.504 1.00 45.65 N
ATOM 17 C5 G B 72 9.348 -26.518 17.172 1.00 46.42 C
ATOM 18 C6 G B 72 9.819 -25.212 16.865 1.00 46.85 C
ATOM 19 O6 G B 72 10.990 -24.804 16.826 1.00 49.41 O
ATOM 20 N1 G B 72 8.776 -24.331 16.581 1.00 44.25 N
ATOM 21 C2 G B 72 7.443 -24.667 16.593 1.00 45.44 C
ATOM 22 N2 G B 72 6.578 -23.684 16.296 1.00 45.42 N
ATOM 23 N3 G B 72 6.986 -25.883 16.878 1.00 46.11 N
ATOM 24 C4 G B 72 7.990 -26.754 17.154 1.00 46.95 C
ATOM 25 P G B 73 6.319 -31.060 13.409 1.00 51.21 P
ATOM 26 OP1 G B 73 5.507 -31.999 12.603 1.00 51.71 O
ATOM 27 OP2 G B 73 7.753 -31.328 13.668 1.00 51.23 O
ATOM 28 O5' G B 73 6.209 -29.583 12.793 1.00 47.94 O
TER

Atoms:
OP1: (-6.470,-23.854,19.784)
OP2: (-5.005,-25.947,19.480)
C3': (-2.004,-21.806,18.610)
C1': (-0.417,-22.888,20.013)
C5': (-3.936,-22.364,20.140)
O4': (-1.639,-22.785,20.712)
C8: (-1.221,-25.215,19.447)
O2': (0.101,-20.716,19.143)
C6: (1.668,-27.150,18.923)
C5: (0.608,-26.251,19.160)
C4: (0.948,-24.950,19.475)
P: (-5.218,-24.598,20.052)
C4': (-2.519,-21.861,20.031)
C2': (-0.500,-21.946,18.815)
C2: (3.095,-25.376,19.334)
N1: (2.923,-26.667,19.022)
N3: (2.180,-24.441,19.579)
N6: (1.494,-28.441,18.608)
N7: (-0.768,-26.407,19.145)
N9: (-0.238,-24.289,19.658)
O5': (-3.995,-23.669,19.633)
O3': (-2.348,-20.555,18.048)
OP1: (9.026,-34.406,17.363)
OP2: (10.832,-32.622,17.778)
C3': (6.383,-30.299,15.831)
C1': (6.568,-28.808,17.602)
C5': (7.116,-32.339,17.154)
O6: (10.990,-24.804,16.826)
O4': (6.820,-30.125,18.077)
C8: (9.108,-28.575,17.683)
C2: (7.443,-24.667,16.593)
C6: (9.819,-25.212,16.865)
C5: (9.348,-26.518,17.172)
C4: (7.990,-26.754,17.154)
P: (9.449,-33.121,17.958)
C4': (6.287,-31.078,17.123)
C2': (5.807,-28.969,16.288)
O2': (4.417,-29.067,16.539)
N1: (8.776,-24.331,16.581)
N2: (6.578,-23.684,16.296)
N3: (6.986,-25.883,16.878)
N7: (10.043,-27.680,17.504)
N9: (7.836,-28.085,17.481)
O5': (8.455,-31.996,17.435)
O3': (5.618,-30.908,14.824)
Image (generated by PyMOL):
PyMOL image
show in jmol