Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0283:0344
Extra
PDB:
ATOM 1 O3' C A 282 40.919 123.835 6.363 1.00 83.60 O
ATOM 2 P C A 283 40.288 124.261 7.774 1.00 85.23 P
ATOM 3 OP1 C A 283 38.892 124.715 7.521 1.00 85.39 O
ATOM 4 OP2 C A 283 41.252 125.179 8.442 1.00 85.15 O
ATOM 5 O5' C A 283 40.237 122.900 8.602 1.00 83.93 O
ATOM 6 C5' C A 283 39.403 121.805 8.186 1.00 81.82 C
ATOM 7 C4' C A 283 39.697 120.581 9.019 1.00 81.07 C
ATOM 8 O4' C A 283 41.074 120.175 8.798 1.00 80.61 O
ATOM 9 C3' C A 283 39.609 120.771 10.528 1.00 80.49 C
ATOM 10 O3' C A 283 38.274 120.685 11.021 1.00 79.97 O
ATOM 11 C2' C A 283 40.491 119.643 11.041 1.00 80.45 C
ATOM 12 O2' C A 283 39.846 118.386 11.032 1.00 79.14 O
ATOM 13 C1' C A 283 41.618 119.658 10.006 1.00 81.74 C
ATOM 14 N1 C A 283 42.751 120.513 10.424 1.00 83.96 N
ATOM 15 C2 C A 283 43.772 119.951 11.216 1.00 84.64 C
ATOM 16 O2 C A 283 43.700 118.750 11.541 1.00 84.85 O
ATOM 17 N3 C A 283 44.808 120.733 11.608 1.00 84.44 N
ATOM 18 C4 C A 283 44.852 122.017 11.245 1.00 83.99 C
ATOM 19 N4 C A 283 45.894 122.746 11.653 1.00 83.69 N
ATOM 20 C5 C A 283 43.832 122.612 10.445 1.00 83.72 C
ATOM 21 C6 C A 283 42.813 121.833 10.059 1.00 84.01 C
ATOM 22 P G A 284 37.851 121.511 12.338 1.00 79.45 P
ATOM 23 OP1 G A 284 36.471 121.085 12.694 1.00 79.33 O
ATOM 24 OP2 G A 284 38.140 122.953 12.116 1.00 78.96 O
ATOM 25 O5' G A 284 38.841 120.983 13.470 1.00 78.13 O
TER
ATOM 1 O3' C B 343 53.578 126.153 17.998 1.00 61.43 O
ATOM 2 P C B 344 54.389 125.472 16.793 1.00 60.75 P
ATOM 3 OP1 C B 344 55.646 124.897 17.354 1.00 62.01 O
ATOM 4 OP2 C B 344 54.464 126.461 15.698 1.00 62.16 O
ATOM 5 O5' C B 344 53.464 124.261 16.330 1.00 61.44 O
ATOM 6 C5' C B 344 53.289 123.107 17.175 1.00 61.27 C
ATOM 7 C4' C B 344 52.214 122.203 16.621 1.00 60.78 C
ATOM 8 O4' C B 344 50.987 122.958 16.456 1.00 60.99 O
ATOM 9 C3' C B 344 52.476 121.618 15.246 1.00 61.06 C
ATOM 10 O3' C B 344 53.298 120.458 15.349 1.00 62.98 O
ATOM 11 C2' C B 344 51.066 121.285 14.773 1.00 61.15 C
ATOM 12 O2' C B 344 50.565 120.102 15.359 1.00 61.44 O
ATOM 13 C1' C B 344 50.271 122.463 15.338 1.00 61.52 C
ATOM 14 N1 C B 344 50.063 123.565 14.383 1.00 62.85 N
ATOM 15 C2 C B 344 48.927 123.540 13.550 1.00 63.79 C
ATOM 16 O2 C B 344 48.135 122.585 13.631 1.00 63.95 O
ATOM 17 N3 C B 344 48.725 124.556 12.680 1.00 63.97 N
ATOM 18 C4 C B 344 49.599 125.565 12.618 1.00 64.23 C
ATOM 19 N4 C B 344 49.356 126.553 11.752 1.00 64.86 N
ATOM 20 C5 C B 344 50.761 125.610 13.444 1.00 64.09 C
ATOM 21 C6 C B 344 50.952 124.602 14.302 1.00 63.04 C
ATOM 22 P A B 345 54.278 120.053 14.137 1.00 65.04 P
ATOM 23 OP1 A B 345 53.445 119.611 12.988 1.00 65.00 O
ATOM 24 OP2 A B 345 55.336 119.151 14.667 1.00 63.60 O
ATOM 25 O5' A B 345 54.963 121.423 13.723 1.00 65.21 O
TER
ATOM 2 P C A 283 40.288 124.261 7.774 1.00 85.23 P
ATOM 3 OP1 C A 283 38.892 124.715 7.521 1.00 85.39 O
ATOM 4 OP2 C A 283 41.252 125.179 8.442 1.00 85.15 O
ATOM 5 O5' C A 283 40.237 122.900 8.602 1.00 83.93 O
ATOM 6 C5' C A 283 39.403 121.805 8.186 1.00 81.82 C
ATOM 7 C4' C A 283 39.697 120.581 9.019 1.00 81.07 C
ATOM 8 O4' C A 283 41.074 120.175 8.798 1.00 80.61 O
ATOM 9 C3' C A 283 39.609 120.771 10.528 1.00 80.49 C
ATOM 10 O3' C A 283 38.274 120.685 11.021 1.00 79.97 O
ATOM 11 C2' C A 283 40.491 119.643 11.041 1.00 80.45 C
ATOM 12 O2' C A 283 39.846 118.386 11.032 1.00 79.14 O
ATOM 13 C1' C A 283 41.618 119.658 10.006 1.00 81.74 C
ATOM 14 N1 C A 283 42.751 120.513 10.424 1.00 83.96 N
ATOM 15 C2 C A 283 43.772 119.951 11.216 1.00 84.64 C
ATOM 16 O2 C A 283 43.700 118.750 11.541 1.00 84.85 O
ATOM 17 N3 C A 283 44.808 120.733 11.608 1.00 84.44 N
ATOM 18 C4 C A 283 44.852 122.017 11.245 1.00 83.99 C
ATOM 19 N4 C A 283 45.894 122.746 11.653 1.00 83.69 N
ATOM 20 C5 C A 283 43.832 122.612 10.445 1.00 83.72 C
ATOM 21 C6 C A 283 42.813 121.833 10.059 1.00 84.01 C
ATOM 22 P G A 284 37.851 121.511 12.338 1.00 79.45 P
ATOM 23 OP1 G A 284 36.471 121.085 12.694 1.00 79.33 O
ATOM 24 OP2 G A 284 38.140 122.953 12.116 1.00 78.96 O
ATOM 25 O5' G A 284 38.841 120.983 13.470 1.00 78.13 O
TER
ATOM 1 O3' C B 343 53.578 126.153 17.998 1.00 61.43 O
ATOM 2 P C B 344 54.389 125.472 16.793 1.00 60.75 P
ATOM 3 OP1 C B 344 55.646 124.897 17.354 1.00 62.01 O
ATOM 4 OP2 C B 344 54.464 126.461 15.698 1.00 62.16 O
ATOM 5 O5' C B 344 53.464 124.261 16.330 1.00 61.44 O
ATOM 6 C5' C B 344 53.289 123.107 17.175 1.00 61.27 C
ATOM 7 C4' C B 344 52.214 122.203 16.621 1.00 60.78 C
ATOM 8 O4' C B 344 50.987 122.958 16.456 1.00 60.99 O
ATOM 9 C3' C B 344 52.476 121.618 15.246 1.00 61.06 C
ATOM 10 O3' C B 344 53.298 120.458 15.349 1.00 62.98 O
ATOM 11 C2' C B 344 51.066 121.285 14.773 1.00 61.15 C
ATOM 12 O2' C B 344 50.565 120.102 15.359 1.00 61.44 O
ATOM 13 C1' C B 344 50.271 122.463 15.338 1.00 61.52 C
ATOM 14 N1 C B 344 50.063 123.565 14.383 1.00 62.85 N
ATOM 15 C2 C B 344 48.927 123.540 13.550 1.00 63.79 C
ATOM 16 O2 C B 344 48.135 122.585 13.631 1.00 63.95 O
ATOM 17 N3 C B 344 48.725 124.556 12.680 1.00 63.97 N
ATOM 18 C4 C B 344 49.599 125.565 12.618 1.00 64.23 C
ATOM 19 N4 C B 344 49.356 126.553 11.752 1.00 64.86 N
ATOM 20 C5 C B 344 50.761 125.610 13.444 1.00 64.09 C
ATOM 21 C6 C B 344 50.952 124.602 14.302 1.00 63.04 C
ATOM 22 P A B 345 54.278 120.053 14.137 1.00 65.04 P
ATOM 23 OP1 A B 345 53.445 119.611 12.988 1.00 65.00 O
ATOM 24 OP2 A B 345 55.336 119.151 14.667 1.00 63.60 O
ATOM 25 O5' A B 345 54.963 121.423 13.723 1.00 65.21 O
TER
Atoms:
C2: (43.772,119.951,11.216)
OP1: (38.892,124.715,7.521)
OP2: (41.252,125.179,8.442)
C4: (44.852,122.017,11.245)
O5': (40.237,122.900,8.602)
C3': (39.609,120.771,10.528)
C1': (41.618,119.658,10.006)
O4': (41.074,120.175,8.798)
C5': (39.403,121.805,8.186)
P: (40.288,124.261,7.774)
O2: (43.700,118.750,11.541)
C4': (39.697,120.581,9.019)
C2': (40.491,119.643,11.041)
O2': (39.846,118.386,11.032)
N1: (42.751,120.513,10.424)
N3: (44.808,120.733,11.608)
N4: (45.894,122.746,11.653)
C6: (42.813,121.833,10.059)
C5: (43.832,122.612,10.445)
O3': (38.274,120.685,11.021)
OP1: (38.892,124.715,7.521)
OP2: (41.252,125.179,8.442)
C4: (44.852,122.017,11.245)
O5': (40.237,122.900,8.602)
C3': (39.609,120.771,10.528)
C1': (41.618,119.658,10.006)
O4': (41.074,120.175,8.798)
C5': (39.403,121.805,8.186)
P: (40.288,124.261,7.774)
O2: (43.700,118.750,11.541)
C4': (39.697,120.581,9.019)
C2': (40.491,119.643,11.041)
O2': (39.846,118.386,11.032)
N1: (42.751,120.513,10.424)
N3: (44.808,120.733,11.608)
N4: (45.894,122.746,11.653)
C6: (42.813,121.833,10.059)
C5: (43.832,122.612,10.445)
O3': (38.274,120.685,11.021)
C2: (48.927,123.540,13.550)
OP1: (55.646,124.897,17.354)
OP2: (54.464,126.461,15.698)
C4: (49.599,125.565,12.618)
O5': (53.464,124.261,16.330)
C3': (52.476,121.618,15.246)
C1': (50.271,122.463,15.338)
O4': (50.987,122.958,16.456)
C5': (53.289,123.107,17.175)
P: (54.389,125.472,16.793)
O2: (48.135,122.585,13.631)
C4': (52.214,122.203,16.621)
C2': (51.066,121.285,14.773)
O2': (50.565,120.102,15.359)
N1: (50.063,123.565,14.383)
N3: (48.725,124.556,12.680)
N4: (49.356,126.553,11.752)
C6: (50.952,124.602,14.302)
C5: (50.761,125.610,13.444)
O3': (53.298,120.458,15.349)
OP1: (55.646,124.897,17.354)
OP2: (54.464,126.461,15.698)
C4: (49.599,125.565,12.618)
O5': (53.464,124.261,16.330)
C3': (52.476,121.618,15.246)
C1': (50.271,122.463,15.338)
O4': (50.987,122.958,16.456)
C5': (53.289,123.107,17.175)
P: (54.389,125.472,16.793)
O2: (48.135,122.585,13.631)
C4': (52.214,122.203,16.621)
C2': (51.066,121.285,14.773)
O2': (50.565,120.102,15.359)
N1: (50.063,123.565,14.383)
N3: (48.725,124.556,12.680)
N4: (49.356,126.553,11.752)
C6: (50.952,124.602,14.302)
C5: (50.761,125.610,13.444)
O3': (53.298,120.458,15.349)
Image (generated by PyMOL):