Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A978:A1001
Extra
PDB:
ATOM 1 O3' C A 977 104.180 -96.227 -10.190 1.00 44.38 O
ATOM 2 P G A 978 104.219 -95.479 -8.770 1.00 25.15 P
ATOM 3 OP1 G A 978 103.344 -96.236 -7.866 1.00 72.08 O
ATOM 4 OP2 G A 978 103.930 -94.055 -9.012 1.00 54.71 O
ATOM 5 O5' G A 978 105.729 -95.651 -8.321 1.00 49.52 O
ATOM 6 C5' G A 978 106.239 -96.929 -7.990 1.00 41.90 C
ATOM 7 C4' G A 978 107.684 -96.865 -7.588 1.00 38.86 C
ATOM 8 O4' G A 978 108.485 -96.399 -8.699 1.00 42.85 O
ATOM 9 C3' G A 978 108.031 -95.897 -6.481 1.00 39.34 C
ATOM 10 O3' G A 978 107.708 -96.381 -5.200 1.00 36.94 O
ATOM 11 C2' G A 978 109.518 -95.724 -6.694 1.00 38.31 C
ATOM 12 O2' G A 978 110.200 -96.891 -6.282 1.00 38.47 O
ATOM 13 C1' G A 978 109.585 -95.663 -8.211 1.00 39.95 C
ATOM 14 N9 G A 978 109.490 -94.278 -8.714 1.00 42.12 N
ATOM 15 C8 G A 978 108.460 -93.732 -9.433 1.00 42.65 C
ATOM 16 N7 G A 978 108.653 -92.486 -9.742 1.00 37.85 N
ATOM 17 C5 G A 978 109.880 -92.196 -9.194 1.00 37.30 C
ATOM 18 C6 G A 978 110.605 -90.995 -9.210 1.00 41.99 C
ATOM 19 O6 G A 978 110.297 -89.917 -9.719 1.00 43.87 O
ATOM 20 N1 G A 978 111.808 -91.114 -8.554 1.00 40.40 N
ATOM 21 C2 G A 978 112.240 -92.251 -7.968 1.00 42.49 C
ATOM 22 N2 G A 978 113.427 -92.162 -7.385 1.00 48.20 N
ATOM 23 N3 G A 978 111.577 -93.380 -7.941 1.00 45.38 N
ATOM 24 C4 G A 978 110.410 -93.281 -8.572 1.00 39.11 C
ATOM 25 P G A 979 107.094 -95.393 -4.093 1.00 28.61 P
ATOM 26 OP1 G A 979 106.661 -96.243 -2.954 1.00 79.43 O
ATOM 27 OP2 G A 979 106.095 -94.554 -4.772 1.00 71.69 O
ATOM 28 O5' G A 979 108.343 -94.506 -3.657 1.00 37.87 O
TER
ATOM 1 O3' U B1000 121.217-102.338 -7.728 1.00 35.34 O
ATOM 2 P A B1001 121.116-101.107 -6.720 1.00 36.40 P
ATOM 3 OP1 A B1001 122.485-100.632 -6.459 1.00 45.26 O
ATOM 4 OP2 A B1001 120.290-101.559 -5.580 1.00 41.84 O
ATOM 5 O5' A B1001 120.350-100.032 -7.565 1.00 37.79 O
ATOM 6 C5' A B1001 120.933 -99.491 -8.725 1.00 39.71 C
ATOM 7 C4' A B1001 120.231 -98.239 -9.153 1.00 36.73 C
ATOM 8 O4' A B1001 118.977 -98.580 -9.766 1.00 39.76 O
ATOM 9 C3' A B1001 119.865 -97.276 -8.047 1.00 36.77 C
ATOM 10 O3' A B1001 120.939 -96.427 -7.704 1.00 35.14 O
ATOM 11 C2' A B1001 118.674 -96.528 -8.631 1.00 39.03 C
ATOM 12 O2' A B1001 119.116 -95.486 -9.474 1.00 40.87 O
ATOM 13 C1' A B1001 118.026 -97.584 -9.511 1.00 40.51 C
ATOM 14 N9 A B1001 116.820 -98.204 -8.910 1.00 44.08 N
ATOM 15 C8 A B1001 116.658 -99.444 -8.354 1.00 41.24 C
ATOM 16 N7 A B1001 115.444 -99.699 -7.965 1.00 38.75 N
ATOM 17 C5 A B1001 114.741 -98.571 -8.299 1.00 36.81 C
ATOM 18 C6 A B1001 113.402 -98.215 -8.166 1.00 37.19 C
ATOM 19 N6 A B1001 112.445 -98.962 -7.623 1.00 40.83 N
ATOM 20 N1 A B1001 113.047 -97.015 -8.617 1.00 42.86 N
ATOM 21 C2 A B1001 113.963 -96.234 -9.170 1.00 43.39 C
ATOM 22 N3 A B1001 115.246 -96.459 -9.358 1.00 42.67 N
ATOM 23 C4 A B1001 115.570 -97.659 -8.893 1.00 40.38 C
ATOM 24 P A B1002 121.330 -96.160 -6.175 1.00 40.74 P
ATOM 25 OP1 A B1002 122.714 -95.659 -6.165 1.00 60.16 O
ATOM 26 OP2 A B1002 121.021 -97.395 -5.411 1.00 50.29 O
ATOM 27 O5' A B1002 120.343 -95.000 -5.756 1.00 49.51 O
TER
ATOM 2 P G A 978 104.219 -95.479 -8.770 1.00 25.15 P
ATOM 3 OP1 G A 978 103.344 -96.236 -7.866 1.00 72.08 O
ATOM 4 OP2 G A 978 103.930 -94.055 -9.012 1.00 54.71 O
ATOM 5 O5' G A 978 105.729 -95.651 -8.321 1.00 49.52 O
ATOM 6 C5' G A 978 106.239 -96.929 -7.990 1.00 41.90 C
ATOM 7 C4' G A 978 107.684 -96.865 -7.588 1.00 38.86 C
ATOM 8 O4' G A 978 108.485 -96.399 -8.699 1.00 42.85 O
ATOM 9 C3' G A 978 108.031 -95.897 -6.481 1.00 39.34 C
ATOM 10 O3' G A 978 107.708 -96.381 -5.200 1.00 36.94 O
ATOM 11 C2' G A 978 109.518 -95.724 -6.694 1.00 38.31 C
ATOM 12 O2' G A 978 110.200 -96.891 -6.282 1.00 38.47 O
ATOM 13 C1' G A 978 109.585 -95.663 -8.211 1.00 39.95 C
ATOM 14 N9 G A 978 109.490 -94.278 -8.714 1.00 42.12 N
ATOM 15 C8 G A 978 108.460 -93.732 -9.433 1.00 42.65 C
ATOM 16 N7 G A 978 108.653 -92.486 -9.742 1.00 37.85 N
ATOM 17 C5 G A 978 109.880 -92.196 -9.194 1.00 37.30 C
ATOM 18 C6 G A 978 110.605 -90.995 -9.210 1.00 41.99 C
ATOM 19 O6 G A 978 110.297 -89.917 -9.719 1.00 43.87 O
ATOM 20 N1 G A 978 111.808 -91.114 -8.554 1.00 40.40 N
ATOM 21 C2 G A 978 112.240 -92.251 -7.968 1.00 42.49 C
ATOM 22 N2 G A 978 113.427 -92.162 -7.385 1.00 48.20 N
ATOM 23 N3 G A 978 111.577 -93.380 -7.941 1.00 45.38 N
ATOM 24 C4 G A 978 110.410 -93.281 -8.572 1.00 39.11 C
ATOM 25 P G A 979 107.094 -95.393 -4.093 1.00 28.61 P
ATOM 26 OP1 G A 979 106.661 -96.243 -2.954 1.00 79.43 O
ATOM 27 OP2 G A 979 106.095 -94.554 -4.772 1.00 71.69 O
ATOM 28 O5' G A 979 108.343 -94.506 -3.657 1.00 37.87 O
TER
ATOM 1 O3' U B1000 121.217-102.338 -7.728 1.00 35.34 O
ATOM 2 P A B1001 121.116-101.107 -6.720 1.00 36.40 P
ATOM 3 OP1 A B1001 122.485-100.632 -6.459 1.00 45.26 O
ATOM 4 OP2 A B1001 120.290-101.559 -5.580 1.00 41.84 O
ATOM 5 O5' A B1001 120.350-100.032 -7.565 1.00 37.79 O
ATOM 6 C5' A B1001 120.933 -99.491 -8.725 1.00 39.71 C
ATOM 7 C4' A B1001 120.231 -98.239 -9.153 1.00 36.73 C
ATOM 8 O4' A B1001 118.977 -98.580 -9.766 1.00 39.76 O
ATOM 9 C3' A B1001 119.865 -97.276 -8.047 1.00 36.77 C
ATOM 10 O3' A B1001 120.939 -96.427 -7.704 1.00 35.14 O
ATOM 11 C2' A B1001 118.674 -96.528 -8.631 1.00 39.03 C
ATOM 12 O2' A B1001 119.116 -95.486 -9.474 1.00 40.87 O
ATOM 13 C1' A B1001 118.026 -97.584 -9.511 1.00 40.51 C
ATOM 14 N9 A B1001 116.820 -98.204 -8.910 1.00 44.08 N
ATOM 15 C8 A B1001 116.658 -99.444 -8.354 1.00 41.24 C
ATOM 16 N7 A B1001 115.444 -99.699 -7.965 1.00 38.75 N
ATOM 17 C5 A B1001 114.741 -98.571 -8.299 1.00 36.81 C
ATOM 18 C6 A B1001 113.402 -98.215 -8.166 1.00 37.19 C
ATOM 19 N6 A B1001 112.445 -98.962 -7.623 1.00 40.83 N
ATOM 20 N1 A B1001 113.047 -97.015 -8.617 1.00 42.86 N
ATOM 21 C2 A B1001 113.963 -96.234 -9.170 1.00 43.39 C
ATOM 22 N3 A B1001 115.246 -96.459 -9.358 1.00 42.67 N
ATOM 23 C4 A B1001 115.570 -97.659 -8.893 1.00 40.38 C
ATOM 24 P A B1002 121.330 -96.160 -6.175 1.00 40.74 P
ATOM 25 OP1 A B1002 122.714 -95.659 -6.165 1.00 60.16 O
ATOM 26 OP2 A B1002 121.021 -97.395 -5.411 1.00 50.29 O
ATOM 27 O5' A B1002 120.343 -95.000 -5.756 1.00 49.51 O
TER
Atoms:
OP1: (103.344,-96.236,-7.866)
OP2: (103.930,-94.055,-9.012)
C3': (108.031,-95.897,-6.481)
C1': (109.585,-95.663,-8.211)
C5': (106.239,-96.929,-7.990)
O6: (110.297,-89.917,-9.719)
O4': (108.485,-96.399,-8.699)
C8: (108.460,-93.732,-9.433)
C2: (112.240,-92.251,-7.968)
C6: (110.605,-90.995,-9.210)
C5: (109.880,-92.196,-9.194)
C4: (110.410,-93.281,-8.572)
P: (104.219,-95.479,-8.770)
C4': (107.684,-96.865,-7.588)
C2': (109.518,-95.724,-6.694)
O2': (110.200,-96.891,-6.282)
N1: (111.808,-91.114,-8.554)
N2: (113.427,-92.162,-7.385)
N3: (111.577,-93.380,-7.941)
N7: (108.653,-92.486,-9.742)
N9: (109.490,-94.278,-8.714)
O5': (105.729,-95.651,-8.321)
O3': (107.708,-96.381,-5.200)
OP2: (103.930,-94.055,-9.012)
C3': (108.031,-95.897,-6.481)
C1': (109.585,-95.663,-8.211)
C5': (106.239,-96.929,-7.990)
O6: (110.297,-89.917,-9.719)
O4': (108.485,-96.399,-8.699)
C8: (108.460,-93.732,-9.433)
C2: (112.240,-92.251,-7.968)
C6: (110.605,-90.995,-9.210)
C5: (109.880,-92.196,-9.194)
C4: (110.410,-93.281,-8.572)
P: (104.219,-95.479,-8.770)
C4': (107.684,-96.865,-7.588)
C2': (109.518,-95.724,-6.694)
O2': (110.200,-96.891,-6.282)
N1: (111.808,-91.114,-8.554)
N2: (113.427,-92.162,-7.385)
N3: (111.577,-93.380,-7.941)
N7: (108.653,-92.486,-9.742)
N9: (109.490,-94.278,-8.714)
O5': (105.729,-95.651,-8.321)
O3': (107.708,-96.381,-5.200)
OP1: (122.485,-100.632,-6.459)
OP2: (120.290,-101.559,-5.580)
C3': (119.865,-97.276,-8.047)
C1': (118.026,-97.584,-9.511)
C5': (120.933,-99.491,-8.725)
O4': (118.977,-98.580,-9.766)
C8: (116.658,-99.444,-8.354)
O2': (119.116,-95.486,-9.474)
C6: (113.402,-98.215,-8.166)
C5: (114.741,-98.571,-8.299)
C4: (115.570,-97.659,-8.893)
P: (121.116,-101.107,-6.720)
C4': (120.231,-98.239,-9.153)
C2': (118.674,-96.528,-8.631)
C2: (113.963,-96.234,-9.170)
N1: (113.047,-97.015,-8.617)
N3: (115.246,-96.459,-9.358)
N6: (112.445,-98.962,-7.623)
N7: (115.444,-99.699,-7.965)
N9: (116.820,-98.204,-8.910)
O5': (120.350,-100.032,-7.565)
O3': (120.939,-96.427,-7.704)
OP2: (120.290,-101.559,-5.580)
C3': (119.865,-97.276,-8.047)
C1': (118.026,-97.584,-9.511)
C5': (120.933,-99.491,-8.725)
O4': (118.977,-98.580,-9.766)
C8: (116.658,-99.444,-8.354)
O2': (119.116,-95.486,-9.474)
C6: (113.402,-98.215,-8.166)
C5: (114.741,-98.571,-8.299)
C4: (115.570,-97.659,-8.893)
P: (121.116,-101.107,-6.720)
C4': (120.231,-98.239,-9.153)
C2': (118.674,-96.528,-8.631)
C2: (113.963,-96.234,-9.170)
N1: (113.047,-97.015,-8.617)
N3: (115.246,-96.459,-9.358)
N6: (112.445,-98.962,-7.623)
N7: (115.444,-99.699,-7.965)
N9: (116.820,-98.204,-8.910)
O5': (120.350,-100.032,-7.565)
O3': (120.939,-96.427,-7.704)
Image (generated by PyMOL):