ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1318:A1734

Extra

PDB:
ATOM 1 O3' G A1317 51.185 -38.042 -50.354 1.00 42.07 O
ATOM 2 P G A1318 50.348 -36.847 -49.694 1.00 55.29 P
ATOM 3 OP1 G A1318 50.175 -37.156 -48.245 1.00 48.78 O
ATOM 4 OP2 G A1318 49.135 -36.680 -50.541 1.00 51.43 O
ATOM 5 O5' G A1318 51.319 -35.581 -49.869 1.00 42.47 O
ATOM 6 C5' G A1318 52.396 -35.359 -48.986 1.00 46.86 C
ATOM 7 C4' G A1318 52.791 -33.913 -48.951 1.00 44.58 C
ATOM 8 O4' G A1318 53.194 -33.498 -50.262 1.00 50.95 O
ATOM 9 C3' G A1318 51.705 -32.937 -48.565 1.00 42.43 C
ATOM 10 O3' G A1318 51.565 -32.805 -47.170 1.00 56.83 O
ATOM 11 C2' G A1318 52.138 -31.652 -49.242 1.00 45.14 C
ATOM 12 O2' G A1318 53.137 -30.994 -48.486 1.00 46.80 O
ATOM 13 C1' G A1318 52.773 -32.181 -50.506 1.00 48.11 C
ATOM 14 N9 G A1318 51.827 -32.217 -51.612 1.00 47.16 N
ATOM 15 C8 G A1318 51.298 -33.365 -52.112 1.00 44.29 C
ATOM 16 N7 G A1318 50.517 -33.127 -53.107 1.00 53.91 N
ATOM 17 C5 G A1318 50.534 -31.742 -53.262 1.00 59.54 C
ATOM 18 C6 G A1318 49.865 -30.901 -54.201 1.00 59.91 C
ATOM 19 O6 G A1318 49.082 -31.203 -55.113 1.00 58.71 O
ATOM 20 N1 G A1318 50.192 -29.569 -53.998 1.00 58.05 N
ATOM 21 C2 G A1318 51.038 -29.093 -53.032 1.00 54.41 C
ATOM 22 N2 G A1318 51.192 -27.762 -53.023 1.00 52.47 N
ATOM 23 N3 G A1318 51.665 -29.865 -52.154 1.00 57.58 N
ATOM 24 C4 G A1318 51.363 -31.164 -52.335 1.00 53.94 C
ATOM 25 P C A1319 50.164 -32.360 -46.555 1.00 49.49 P
ATOM 26 OP1 C A1319 50.391 -31.998 -45.132 1.00 48.32 O
ATOM 27 OP2 C A1319 49.210 -33.441 -46.871 1.00 59.76 O
ATOM 28 O5' C A1319 49.814 -31.054 -47.391 1.00 43.24 O
TER

ATOM 1 O3' U B1733 63.454 -26.174 -50.297 1.00 46.14 O
ATOM 2 P A B1734 62.557 -25.152 -49.495 1.00 64.34 P
ATOM 3 OP1 A B1734 63.364 -23.917 -49.280 1.00 73.21 O
ATOM 4 OP2 A B1734 62.036 -25.874 -48.312 1.00 65.59 O
ATOM 5 O5' A B1734 61.390 -24.875 -50.537 1.00 59.87 O
ATOM 6 C5' A B1734 61.696 -24.573 -51.892 1.00 62.27 C
ATOM 7 C4' A B1734 60.559 -24.923 -52.830 1.00 53.40 C
ATOM 8 O4' A B1734 60.275 -26.342 -52.759 1.00 55.46 O
ATOM 9 C3' A B1734 59.220 -24.245 -52.563 1.00 44.35 C
ATOM 10 O3' A B1734 59.141 -22.962 -53.147 1.00 43.53 O
ATOM 11 C2' A B1734 58.241 -25.206 -53.181 1.00 52.59 C
ATOM 12 O2' A B1734 58.213 -25.007 -54.577 1.00 55.24 O
ATOM 13 C1' A B1734 58.899 -26.559 -52.909 1.00 53.51 C
ATOM 14 N9 A B1734 58.396 -27.201 -51.684 1.00 57.89 N
ATOM 15 C8 A B1734 58.860 -27.048 -50.403 1.00 67.07 C
ATOM 16 N7 A B1734 58.258 -27.775 -49.492 1.00 59.98 N
ATOM 17 C5 A B1734 57.339 -28.475 -50.240 1.00 60.06 C
ATOM 18 C6 A B1734 56.393 -29.421 -49.866 1.00 57.15 C
ATOM 19 N6 A B1734 56.228 -29.824 -48.626 1.00 63.18 N
ATOM 20 N1 A B1734 55.612 -29.934 -50.809 1.00 58.29 N
ATOM 21 C2 A B1734 55.812 -29.518 -52.069 1.00 64.72 C
ATOM 22 N3 A B1734 56.678 -28.637 -52.563 1.00 58.37 N
ATOM 23 C4 A B1734 57.421 -28.144 -51.577 1.00 57.96 C
ATOM 24 P A B1735 58.250 -21.805 -52.475 1.00 50.60 P
ATOM 25 OP1 A B1735 58.397 -20.585 -53.323 1.00 55.66 O
ATOM 26 OP2 A B1735 58.642 -21.734 -51.054 1.00 45.06 O
ATOM 27 O5' A B1735 56.773 -22.369 -52.602 1.00 55.34 O
TER

Atoms:
OP1: (50.175,-37.156,-48.245)
OP2: (49.135,-36.680,-50.541)
C3': (51.705,-32.937,-48.565)
C1': (52.773,-32.181,-50.506)
C5': (52.396,-35.359,-48.986)
O6: (49.082,-31.203,-55.113)
O4': (53.194,-33.498,-50.262)
C8: (51.298,-33.365,-52.112)
C2: (51.038,-29.093,-53.032)
C6: (49.865,-30.901,-54.201)
C5: (50.534,-31.742,-53.262)
C4: (51.363,-31.164,-52.335)
P: (50.348,-36.847,-49.694)
C4': (52.791,-33.913,-48.951)
C2': (52.138,-31.652,-49.242)
O2': (53.137,-30.994,-48.486)
N1: (50.192,-29.569,-53.998)
N2: (51.192,-27.762,-53.023)
N3: (51.665,-29.865,-52.154)
N7: (50.517,-33.127,-53.107)
N9: (51.827,-32.217,-51.612)
O5': (51.319,-35.581,-49.869)
O3': (51.565,-32.805,-47.170)
OP1: (63.364,-23.917,-49.280)
OP2: (62.036,-25.874,-48.312)
C3': (59.220,-24.245,-52.563)
C1': (58.899,-26.559,-52.909)
C5': (61.696,-24.573,-51.892)
O4': (60.275,-26.342,-52.759)
C8: (58.860,-27.048,-50.403)
O2': (58.213,-25.007,-54.577)
C6: (56.393,-29.421,-49.866)
C5: (57.339,-28.475,-50.240)
C4: (57.421,-28.144,-51.577)
P: (62.557,-25.152,-49.495)
C4': (60.559,-24.923,-52.830)
C2': (58.241,-25.206,-53.181)
C2: (55.812,-29.518,-52.069)
N1: (55.612,-29.934,-50.809)
N3: (56.678,-28.637,-52.563)
N6: (56.228,-29.824,-48.626)
N7: (58.258,-27.775,-49.492)
N9: (58.396,-27.201,-51.684)
O5': (61.390,-24.875,-50.537)
O3': (59.141,-22.962,-53.147)
Image (generated by PyMOL):
PyMOL image
show in jmol