ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MMS:C32:C33

Extra

PDB:
ATOM 1 O3' U A 31 -4.544 3.677 13.786 1.00 48.43 O
ATOM 2 P U A 32 -3.685 3.548 15.138 1.00 44.11 P
ATOM 3 OP1 U A 32 -4.550 2.923 16.170 1.00 44.56 O
ATOM 4 OP2 U A 32 -3.013 4.855 15.416 1.00 33.72 O
ATOM 5 O5' U A 32 -2.554 2.515 14.732 1.00 26.53 O
ATOM 6 C5' U A 32 -1.204 2.710 15.133 1.00 27.01 C
ATOM 7 C4' U A 32 -0.310 1.810 14.328 1.00 35.50 C
ATOM 8 O4' U A 32 0.049 2.450 13.077 1.00 37.83 O
ATOM 9 C3' U A 32 1.014 1.490 14.985 1.00 42.54 C
ATOM 10 O3' U A 32 0.829 0.394 15.868 1.00 53.77 O
ATOM 11 C2' U A 32 1.899 1.142 13.797 1.00 40.40 C
ATOM 12 O2' U A 32 1.676 -0.184 13.354 1.00 50.14 O
ATOM 13 C1' U A 32 1.383 2.112 12.733 1.00 31.81 C
ATOM 14 N1 U A 32 2.176 3.350 12.641 1.00 27.07 N
ATOM 15 C2 U A 32 3.403 3.291 11.995 1.00 27.98 C
ATOM 16 O2 U A 32 3.842 2.278 11.491 1.00 38.26 O
ATOM 17 N3 U A 32 4.101 4.471 11.959 1.00 27.06 N
ATOM 18 C4 U A 32 3.711 5.686 12.480 1.00 29.89 C
ATOM 19 O4 U A 32 4.463 6.660 12.376 1.00 35.97 O
ATOM 20 C5 U A 32 2.432 5.676 13.120 1.00 28.35 C
ATOM 21 C6 U A 32 1.726 4.538 13.180 1.00 34.18 C
ATOM 22 P A A 33 1.531 0.409 17.308 1.00 46.22 P
ATOM 23 OP1 A A 33 0.915 -0.683 18.102 1.00 45.99 O
ATOM 24 OP2 A A 33 1.502 1.811 17.819 1.00 47.82 O
ATOM 25 O5' A A 33 3.037 0.024 16.984 1.00 32.44 O
TER

ATOM 1 O3' U B 32 0.829 0.394 15.868 1.00 53.77 O
ATOM 2 P A B 33 1.531 0.409 17.308 1.00 46.22 P
ATOM 3 OP1 A B 33 0.915 -0.683 18.102 1.00 45.99 O
ATOM 4 OP2 A B 33 1.502 1.811 17.819 1.00 47.82 O
ATOM 5 O5' A B 33 3.037 0.024 16.984 1.00 32.44 O
ATOM 6 C5' A B 33 4.103 0.403 17.854 1.00 26.01 C
ATOM 7 C4' A B 33 5.395 -0.104 17.293 1.00 30.31 C
ATOM 8 O4' A B 33 5.314 -1.544 17.185 1.00 39.98 O
ATOM 9 C3' A B 33 5.631 0.378 15.881 1.00 31.04 C
ATOM 10 O3' A B 33 6.308 1.611 15.926 1.00 35.76 O
ATOM 11 C2' A B 33 6.448 -0.741 15.252 1.00 34.39 C
ATOM 12 O2' A B 33 7.825 -0.635 15.548 1.00 29.53 O
ATOM 13 C1' A B 33 5.872 -1.970 15.956 1.00 36.40 C
ATOM 14 N9 A B 33 4.827 -2.698 15.230 1.00 38.88 N
ATOM 15 C8 A B 33 3.464 -2.577 15.388 1.00 38.21 C
ATOM 16 N7 A B 33 2.770 -3.432 14.677 1.00 33.92 N
ATOM 17 C5 A B 33 3.737 -4.151 13.984 1.00 35.92 C
ATOM 18 C6 A B 33 3.648 -5.222 13.069 1.00 34.35 C
ATOM 19 N6 A B 33 2.493 -5.781 12.695 1.00 38.02 N
ATOM 20 N1 A B 33 4.802 -5.704 12.551 1.00 36.24 N
ATOM 21 C2 A B 33 5.960 -5.145 12.935 1.00 38.72 C
ATOM 22 N3 A B 33 6.173 -4.143 13.790 1.00 34.15 N
ATOM 23 C4 A B 33 5.007 -3.689 14.291 1.00 36.93 C
ATOM 24 P A B 34 5.839 2.793 14.965 1.00 32.91 P
ATOM 25 OP1 A B 34 6.554 4.030 15.366 1.00 36.15 O
ATOM 26 OP2 A B 34 4.351 2.768 14.939 1.00 23.95 O
ATOM 27 O5' A B 34 6.414 2.342 13.557 1.00 34.02 O
TER

Atoms:
C4: (3.711,5.686,12.480)
N3: (4.101,4.471,11.959)
OP1: (-4.550,2.923,16.170)
OP2: (-3.013,4.855,15.416)
C2: (3.403,3.291,11.995)
C1': (1.383,2.112,12.733)
C3': (1.014,1.490,14.985)
O5': (-2.554,2.515,14.732)
O4': (0.049,2.450,13.077)
C5': (-1.204,2.710,15.133)
P: (-3.685,3.548,15.138)
C4': (-0.310,1.810,14.328)
C2': (1.899,1.142,13.797)
O2': (1.676,-0.184,13.354)
N1: (2.176,3.350,12.641)
O4: (4.463,6.660,12.376)
O2: (3.842,2.278,11.491)
C6: (1.726,4.538,13.180)
C5: (2.432,5.676,13.120)
O3': (0.829,0.394,15.868)
OP1: (0.915,-0.683,18.102)
OP2: (1.502,1.811,17.819)
C3': (5.631,0.378,15.881)
C1': (5.872,-1.970,15.956)
C5': (4.103,0.403,17.854)
O4': (5.314,-1.544,17.185)
C8: (3.464,-2.577,15.388)
O2': (7.825,-0.635,15.548)
C6: (3.648,-5.222,13.069)
C5: (3.737,-4.151,13.984)
C4: (5.007,-3.689,14.291)
P: (1.531,0.409,17.308)
C4': (5.395,-0.104,17.293)
C2': (6.448,-0.741,15.252)
C2: (5.960,-5.145,12.935)
N1: (4.802,-5.704,12.551)
N3: (6.173,-4.143,13.790)
N6: (2.493,-5.781,12.695)
N7: (2.770,-3.432,14.677)
N9: (4.827,-2.698,15.230)
O5': (3.037,0.024,16.984)
O3': (6.308,1.611,15.926)
Image (generated by PyMOL):
PyMOL image
show in jmol