Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0161:0163
Extra
PDB:
ATOM 1 O3' U A 160 68.664 103.283 53.013 1.00 37.80 O
ATOM 2 P C A 161 68.590 104.488 51.959 1.00 38.13 P
ATOM 3 OP1 C A 161 67.404 104.249 51.108 1.00 39.11 O
ATOM 4 OP2 C A 161 69.920 104.660 51.338 1.00 37.13 O
ATOM 5 O5' C A 161 68.273 105.762 52.845 1.00 38.46 O
ATOM 6 C5' C A 161 67.075 105.824 53.623 1.00 37.58 C
ATOM 7 C4' C A 161 67.133 106.999 54.561 1.00 38.93 C
ATOM 8 O4' C A 161 68.187 106.810 55.536 1.00 39.38 O
ATOM 9 C3' C A 161 67.494 108.318 53.913 1.00 39.81 C
ATOM 10 O3' C A 161 66.363 108.890 53.305 1.00 38.29 O
ATOM 11 C2' C A 161 67.978 109.134 55.099 1.00 40.21 C
ATOM 12 O2' C A 161 66.896 109.585 55.883 1.00 44.60 O
ATOM 13 C1' C A 161 68.735 108.070 55.889 1.00 38.61 C
ATOM 14 N1 C A 161 70.179 108.034 55.625 1.00 37.71 N
ATOM 15 C2 C A 161 71.035 108.683 56.517 1.00 38.78 C
ATOM 16 O2 C A 161 70.545 109.319 57.464 1.00 36.68 O
ATOM 17 N3 C A 161 72.375 108.602 56.322 1.00 39.74 N
ATOM 18 C4 C A 161 72.858 107.923 55.278 1.00 40.15 C
ATOM 19 N4 C A 161 74.179 107.856 55.133 1.00 40.88 N
ATOM 20 C5 C A 161 72.005 107.281 54.338 1.00 39.34 C
ATOM 21 C6 C A 161 70.685 107.361 54.546 1.00 38.12 C
ATOM 22 P A A 162 66.550 109.837 52.041 1.00 38.84 P
ATOM 23 OP1 A A 162 67.479 110.910 52.434 1.00 38.99 O
ATOM 24 OP2 A A 162 65.186 110.171 51.539 1.00 36.79 O
ATOM 25 O5' A A 162 67.291 108.930 50.973 1.00 38.41 O
TER
ATOM 1 O3' A B 162 70.177 107.473 48.150 1.00 38.73 O
ATOM 2 P G B 163 69.862 106.435 46.974 1.00 39.60 P
ATOM 3 OP1 G B 163 68.541 106.784 46.398 1.00 38.62 O
ATOM 4 OP2 G B 163 70.109 105.065 47.463 1.00 35.31 O
ATOM 5 O5' G B 163 71.007 106.790 45.922 1.00 39.55 O
ATOM 6 C5' G B 163 70.888 107.933 45.043 1.00 37.34 C
ATOM 7 C4' G B 163 71.349 109.196 45.738 1.00 35.88 C
ATOM 8 O4' G B 163 72.735 109.047 46.161 1.00 37.04 O
ATOM 9 C3' G B 163 71.335 110.453 44.868 1.00 35.69 C
ATOM 10 O3' G B 163 70.988 111.560 45.688 1.00 34.89 O
ATOM 11 C2' G B 163 72.795 110.587 44.461 1.00 35.74 C
ATOM 12 O2' G B 163 73.156 111.891 44.070 1.00 36.08 O
ATOM 13 C1' G B 163 73.455 110.197 45.772 1.00 36.14 C
ATOM 14 N9 G B 163 74.883 109.901 45.756 1.00 35.68 N
ATOM 15 C8 G B 163 75.581 109.178 44.826 1.00 34.98 C
ATOM 16 N7 G B 163 76.851 109.082 45.103 1.00 36.47 N
ATOM 17 C5 G B 163 77.003 109.790 46.288 1.00 38.26 C
ATOM 18 C6 G B 163 78.170 110.038 47.088 1.00 39.72 C
ATOM 19 O6 G B 163 79.335 109.663 46.903 1.00 41.27 O
ATOM 20 N1 G B 163 77.870 110.805 48.206 1.00 40.48 N
ATOM 21 C2 G B 163 76.623 111.275 48.530 1.00 41.54 C
ATOM 22 N2 G B 163 76.548 112.009 49.653 1.00 41.52 N
ATOM 23 N3 G B 163 75.531 111.046 47.805 1.00 40.09 N
ATOM 24 C4 G B 163 75.797 110.304 46.704 1.00 37.71 C
ATOM 25 P U B 164 70.630 112.971 45.019 1.00 36.34 P
ATOM 26 OP1 U B 164 70.011 112.734 43.698 1.00 37.31 O
ATOM 27 OP2 U B 164 71.814 113.844 45.120 1.00 39.11 O
ATOM 28 O5' U B 164 69.533 113.580 45.990 1.00 38.85 O
TER
ATOM 2 P C A 161 68.590 104.488 51.959 1.00 38.13 P
ATOM 3 OP1 C A 161 67.404 104.249 51.108 1.00 39.11 O
ATOM 4 OP2 C A 161 69.920 104.660 51.338 1.00 37.13 O
ATOM 5 O5' C A 161 68.273 105.762 52.845 1.00 38.46 O
ATOM 6 C5' C A 161 67.075 105.824 53.623 1.00 37.58 C
ATOM 7 C4' C A 161 67.133 106.999 54.561 1.00 38.93 C
ATOM 8 O4' C A 161 68.187 106.810 55.536 1.00 39.38 O
ATOM 9 C3' C A 161 67.494 108.318 53.913 1.00 39.81 C
ATOM 10 O3' C A 161 66.363 108.890 53.305 1.00 38.29 O
ATOM 11 C2' C A 161 67.978 109.134 55.099 1.00 40.21 C
ATOM 12 O2' C A 161 66.896 109.585 55.883 1.00 44.60 O
ATOM 13 C1' C A 161 68.735 108.070 55.889 1.00 38.61 C
ATOM 14 N1 C A 161 70.179 108.034 55.625 1.00 37.71 N
ATOM 15 C2 C A 161 71.035 108.683 56.517 1.00 38.78 C
ATOM 16 O2 C A 161 70.545 109.319 57.464 1.00 36.68 O
ATOM 17 N3 C A 161 72.375 108.602 56.322 1.00 39.74 N
ATOM 18 C4 C A 161 72.858 107.923 55.278 1.00 40.15 C
ATOM 19 N4 C A 161 74.179 107.856 55.133 1.00 40.88 N
ATOM 20 C5 C A 161 72.005 107.281 54.338 1.00 39.34 C
ATOM 21 C6 C A 161 70.685 107.361 54.546 1.00 38.12 C
ATOM 22 P A A 162 66.550 109.837 52.041 1.00 38.84 P
ATOM 23 OP1 A A 162 67.479 110.910 52.434 1.00 38.99 O
ATOM 24 OP2 A A 162 65.186 110.171 51.539 1.00 36.79 O
ATOM 25 O5' A A 162 67.291 108.930 50.973 1.00 38.41 O
TER
ATOM 1 O3' A B 162 70.177 107.473 48.150 1.00 38.73 O
ATOM 2 P G B 163 69.862 106.435 46.974 1.00 39.60 P
ATOM 3 OP1 G B 163 68.541 106.784 46.398 1.00 38.62 O
ATOM 4 OP2 G B 163 70.109 105.065 47.463 1.00 35.31 O
ATOM 5 O5' G B 163 71.007 106.790 45.922 1.00 39.55 O
ATOM 6 C5' G B 163 70.888 107.933 45.043 1.00 37.34 C
ATOM 7 C4' G B 163 71.349 109.196 45.738 1.00 35.88 C
ATOM 8 O4' G B 163 72.735 109.047 46.161 1.00 37.04 O
ATOM 9 C3' G B 163 71.335 110.453 44.868 1.00 35.69 C
ATOM 10 O3' G B 163 70.988 111.560 45.688 1.00 34.89 O
ATOM 11 C2' G B 163 72.795 110.587 44.461 1.00 35.74 C
ATOM 12 O2' G B 163 73.156 111.891 44.070 1.00 36.08 O
ATOM 13 C1' G B 163 73.455 110.197 45.772 1.00 36.14 C
ATOM 14 N9 G B 163 74.883 109.901 45.756 1.00 35.68 N
ATOM 15 C8 G B 163 75.581 109.178 44.826 1.00 34.98 C
ATOM 16 N7 G B 163 76.851 109.082 45.103 1.00 36.47 N
ATOM 17 C5 G B 163 77.003 109.790 46.288 1.00 38.26 C
ATOM 18 C6 G B 163 78.170 110.038 47.088 1.00 39.72 C
ATOM 19 O6 G B 163 79.335 109.663 46.903 1.00 41.27 O
ATOM 20 N1 G B 163 77.870 110.805 48.206 1.00 40.48 N
ATOM 21 C2 G B 163 76.623 111.275 48.530 1.00 41.54 C
ATOM 22 N2 G B 163 76.548 112.009 49.653 1.00 41.52 N
ATOM 23 N3 G B 163 75.531 111.046 47.805 1.00 40.09 N
ATOM 24 C4 G B 163 75.797 110.304 46.704 1.00 37.71 C
ATOM 25 P U B 164 70.630 112.971 45.019 1.00 36.34 P
ATOM 26 OP1 U B 164 70.011 112.734 43.698 1.00 37.31 O
ATOM 27 OP2 U B 164 71.814 113.844 45.120 1.00 39.11 O
ATOM 28 O5' U B 164 69.533 113.580 45.990 1.00 38.85 O
TER
Atoms:
C2: (71.035,108.683,56.517)
OP1: (67.404,104.249,51.108)
OP2: (69.920,104.660,51.338)
C4: (72.858,107.923,55.278)
O5': (68.273,105.762,52.845)
C3': (67.494,108.318,53.913)
C1': (68.735,108.070,55.889)
O4': (68.187,106.810,55.536)
C5': (67.075,105.824,53.623)
P: (68.590,104.488,51.959)
O2: (70.545,109.319,57.464)
C4': (67.133,106.999,54.561)
C2': (67.978,109.134,55.099)
O2': (66.896,109.585,55.883)
N1: (70.179,108.034,55.625)
N3: (72.375,108.602,56.322)
N4: (74.179,107.856,55.133)
C6: (70.685,107.361,54.546)
C5: (72.005,107.281,54.338)
O3': (66.363,108.890,53.305)
OP1: (67.404,104.249,51.108)
OP2: (69.920,104.660,51.338)
C4: (72.858,107.923,55.278)
O5': (68.273,105.762,52.845)
C3': (67.494,108.318,53.913)
C1': (68.735,108.070,55.889)
O4': (68.187,106.810,55.536)
C5': (67.075,105.824,53.623)
P: (68.590,104.488,51.959)
O2: (70.545,109.319,57.464)
C4': (67.133,106.999,54.561)
C2': (67.978,109.134,55.099)
O2': (66.896,109.585,55.883)
N1: (70.179,108.034,55.625)
N3: (72.375,108.602,56.322)
N4: (74.179,107.856,55.133)
C6: (70.685,107.361,54.546)
C5: (72.005,107.281,54.338)
O3': (66.363,108.890,53.305)
OP1: (68.541,106.784,46.398)
OP2: (70.109,105.065,47.463)
C3': (71.335,110.453,44.868)
C1': (73.455,110.197,45.772)
C5': (70.888,107.933,45.043)
O6: (79.335,109.663,46.903)
O4': (72.735,109.047,46.161)
C8: (75.581,109.178,44.826)
C2: (76.623,111.275,48.530)
C6: (78.170,110.038,47.088)
C5: (77.003,109.790,46.288)
C4: (75.797,110.304,46.704)
P: (69.862,106.435,46.974)
C4': (71.349,109.196,45.738)
C2': (72.795,110.587,44.461)
O2': (73.156,111.891,44.070)
N1: (77.870,110.805,48.206)
N2: (76.548,112.009,49.653)
N3: (75.531,111.046,47.805)
N7: (76.851,109.082,45.103)
N9: (74.883,109.901,45.756)
O5': (71.007,106.790,45.922)
O3': (70.988,111.560,45.688)
OP2: (70.109,105.065,47.463)
C3': (71.335,110.453,44.868)
C1': (73.455,110.197,45.772)
C5': (70.888,107.933,45.043)
O6: (79.335,109.663,46.903)
O4': (72.735,109.047,46.161)
C8: (75.581,109.178,44.826)
C2: (76.623,111.275,48.530)
C6: (78.170,110.038,47.088)
C5: (77.003,109.790,46.288)
C4: (75.797,110.304,46.704)
P: (69.862,106.435,46.974)
C4': (71.349,109.196,45.738)
C2': (72.795,110.587,44.461)
O2': (73.156,111.891,44.070)
N1: (77.870,110.805,48.206)
N2: (76.548,112.009,49.653)
N3: (75.531,111.046,47.805)
N7: (76.851,109.082,45.103)
N9: (74.883,109.901,45.756)
O5': (71.007,106.790,45.922)
O3': (70.988,111.560,45.688)
Image (generated by PyMOL):