ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWW:A6:B61

Extra

PDB:
ATOM 1 O3' U A 5 9.177 -24.768 7.348 1.00 67.01 O
ATOM 2 P G A 6 9.671 -26.040 8.182 1.00 65.30 P
ATOM 3 OP1 G A 6 10.858 -25.627 8.968 1.00 65.07 O
ATOM 4 OP2 G A 6 9.753 -27.220 7.289 1.00 64.67 O
ATOM 5 O5' G A 6 8.443 -26.248 9.179 1.00 64.24 O
ATOM 6 C5' G A 6 8.197 -25.287 10.202 1.00 63.60 C
ATOM 7 C4' G A 6 6.848 -25.529 10.844 1.00 62.62 C
ATOM 8 O4' G A 6 5.819 -25.460 9.825 1.00 63.44 O
ATOM 9 C3' G A 6 6.654 -26.909 11.454 1.00 60.78 C
ATOM 10 O3' G A 6 7.232 -27.001 12.750 1.00 59.59 O
ATOM 11 C2' G A 6 5.134 -26.987 11.482 1.00 60.89 C
ATOM 12 O2' G A 6 4.566 -26.185 12.498 1.00 60.46 O
ATOM 13 C1' G A 6 4.807 -26.413 10.104 1.00 62.34 C
ATOM 14 N9 G A 6 4.761 -27.431 9.048 1.00 62.10 N
ATOM 15 C8 G A 6 5.727 -27.713 8.112 1.00 62.51 C
ATOM 16 N7 G A 6 5.404 -28.680 7.300 1.00 62.83 N
ATOM 17 C5 G A 6 4.139 -29.071 7.724 1.00 62.41 C
ATOM 18 C6 G A 6 3.275 -30.083 7.226 1.00 62.45 C
ATOM 19 O6 G A 6 3.469 -30.858 6.275 1.00 62.97 O
ATOM 20 N1 G A 6 2.079 -30.151 7.944 1.00 61.95 N
ATOM 21 C2 G A 6 1.757 -29.345 9.014 1.00 61.42 C
ATOM 22 N2 G A 6 0.563 -29.550 9.589 1.00 60.28 N
ATOM 23 N3 G A 6 2.558 -28.395 9.486 1.00 61.73 N
ATOM 24 C4 G A 6 3.729 -28.311 8.798 1.00 62.00 C
ATOM 25 P G A 7 8.030 -28.322 13.189 1.00 58.43 P
ATOM 26 OP1 G A 7 8.444 -28.148 14.600 1.00 58.00 O
ATOM 27 OP2 G A 7 9.052 -28.628 12.160 1.00 58.32 O
ATOM 28 O5' G A 7 6.920 -29.472 13.092 1.00 57.46 O
TER

ATOM 1 O3' G B 60 -3.423 -17.701 10.185 1.00 71.44 O
ATOM 2 P A B 61 -4.077 -17.905 11.630 1.00 69.65 P
ATOM 3 OP1 A B 61 -5.303 -17.075 11.677 1.00 70.66 O
ATOM 4 OP2 A B 61 -3.033 -17.749 12.670 1.00 68.47 O
ATOM 5 O5' A B 61 -4.495 -19.443 11.588 1.00 67.78 O
ATOM 6 C5' A B 61 -5.226 -19.937 10.476 1.00 66.53 C
ATOM 7 C4' A B 61 -4.757 -21.334 10.136 1.00 64.53 C
ATOM 8 O4' A B 61 -3.421 -21.300 9.583 1.00 63.97 O
ATOM 9 C3' A B 61 -4.567 -22.253 11.325 1.00 63.03 C
ATOM 10 O3' A B 61 -5.810 -22.683 11.841 1.00 62.36 O
ATOM 11 C2' A B 61 -3.786 -23.373 10.657 1.00 62.41 C
ATOM 12 O2' A B 61 -4.599 -24.192 9.838 1.00 62.66 O
ATOM 13 C1' A B 61 -2.816 -22.563 9.801 1.00 62.45 C
ATOM 14 N9 A B 61 -1.494 -22.393 10.408 1.00 61.41 N
ATOM 15 C8 A B 61 -1.059 -21.365 11.200 1.00 61.43 C
ATOM 16 N7 A B 61 0.187 -21.488 11.599 1.00 60.63 N
ATOM 17 C5 A B 61 0.599 -22.681 11.034 1.00 59.94 C
ATOM 18 C6 A B 61 1.821 -23.386 11.071 1.00 59.43 C
ATOM 19 N6 A B 61 2.898 -22.963 11.738 1.00 59.14 N
ATOM 20 N1 A B 61 1.901 -24.554 10.394 1.00 59.37 N
ATOM 21 C2 A B 61 0.826 -24.987 9.719 1.00 59.60 C
ATOM 22 N3 A B 61 -0.373 -24.412 9.611 1.00 60.06 N
ATOM 23 C4 A B 61 -0.424 -23.253 10.296 1.00 60.38 C
ATOM 24 P A B 62 -5.922 -23.045 13.394 1.00 61.06 P
ATOM 25 OP1 A B 62 -7.362 -23.069 13.739 1.00 61.57 O
ATOM 26 OP2 A B 62 -5.013 -22.162 14.159 1.00 60.93 O
ATOM 27 O5' A B 62 -5.319 -24.529 13.436 1.00 60.04 O
TER

Atoms:
OP1: (10.858,-25.627,8.968)
OP2: (9.753,-27.220,7.289)
C3': (6.654,-26.909,11.454)
C1': (4.807,-26.413,10.104)
C5': (8.197,-25.287,10.202)
O6: (3.469,-30.858,6.275)
O4': (5.819,-25.460,9.825)
C8: (5.727,-27.713,8.112)
C2: (1.757,-29.345,9.014)
C6: (3.275,-30.083,7.226)
C5: (4.139,-29.071,7.724)
C4: (3.729,-28.311,8.798)
P: (9.671,-26.040,8.182)
C4': (6.848,-25.529,10.844)
C2': (5.134,-26.987,11.482)
O2': (4.566,-26.185,12.498)
N1: (2.079,-30.151,7.944)
N2: (0.563,-29.550,9.589)
N3: (2.558,-28.395,9.486)
N7: (5.404,-28.680,7.300)
N9: (4.761,-27.431,9.048)
O5': (8.443,-26.248,9.179)
O3': (7.232,-27.001,12.750)
OP1: (-5.303,-17.075,11.677)
OP2: (-3.033,-17.749,12.670)
C3': (-4.567,-22.253,11.325)
C1': (-2.816,-22.563,9.801)
C5': (-5.226,-19.937,10.476)
O4': (-3.421,-21.300,9.583)
C8: (-1.059,-21.365,11.200)
O2': (-4.599,-24.192,9.838)
C6: (1.821,-23.386,11.071)
C5: (0.599,-22.681,11.034)
C4: (-0.424,-23.253,10.296)
P: (-4.077,-17.905,11.630)
C4': (-4.757,-21.334,10.136)
C2': (-3.786,-23.373,10.657)
C2: (0.826,-24.987,9.719)
N1: (1.901,-24.554,10.394)
N3: (-0.373,-24.412,9.611)
N6: (2.898,-22.963,11.738)
N7: (0.187,-21.488,11.599)
N9: (-1.494,-22.393,10.408)
O5': (-4.495,-19.443,11.588)
O3': (-5.810,-22.683,11.841)
Image (generated by PyMOL):
PyMOL image
show in jmol