Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:A6:B61
Extra
PDB:
ATOM 1 O3' U A 5 9.190 -25.093 7.231 1.00 97.12 O
ATOM 2 P G A 6 9.693 -26.326 8.119 1.00 94.97 P
ATOM 3 OP1 G A 6 10.853 -25.861 8.915 1.00 94.83 O
ATOM 4 OP2 G A 6 9.821 -27.532 7.267 1.00 94.19 O
ATOM 5 O5' G A 6 8.447 -26.540 9.093 1.00 94.23 O
ATOM 6 C5' G A 6 8.088 -25.520 10.020 1.00 94.49 C
ATOM 7 C4' G A 6 6.730 -25.805 10.623 1.00 93.96 C
ATOM 8 O4' G A 6 5.729 -25.804 9.572 1.00 94.74 O
ATOM 9 C3' G A 6 6.569 -27.184 11.240 1.00 92.41 C
ATOM 10 O3' G A 6 7.126 -27.257 12.540 1.00 91.83 O
ATOM 11 C2' G A 6 5.051 -27.325 11.235 1.00 92.19 C
ATOM 12 O2' G A 6 4.422 -26.537 12.226 1.00 92.08 O
ATOM 13 C1' G A 6 4.742 -26.788 9.843 1.00 93.06 C
ATOM 14 N9 G A 6 4.757 -27.821 8.800 1.00 92.29 N
ATOM 15 C8 G A 6 5.764 -28.101 7.901 1.00 92.47 C
ATOM 16 N7 G A 6 5.486 -29.083 7.087 1.00 92.33 N
ATOM 17 C5 G A 6 4.211 -29.485 7.471 1.00 91.67 C
ATOM 18 C6 G A 6 3.376 -30.513 6.957 1.00 91.27 C
ATOM 19 O6 G A 6 3.603 -31.299 6.028 1.00 91.38 O
ATOM 20 N1 G A 6 2.160 -30.588 7.637 1.00 90.93 N
ATOM 21 C2 G A 6 1.791 -29.771 8.684 1.00 90.32 C
ATOM 22 N2 G A 6 0.578 -29.987 9.213 1.00 89.17 N
ATOM 23 N3 G A 6 2.562 -28.804 9.170 1.00 90.53 N
ATOM 24 C4 G A 6 3.751 -28.718 8.522 1.00 91.31 C
ATOM 25 P G A 7 7.872 -28.609 12.968 1.00 91.27 P
ATOM 26 OP1 G A 7 8.246 -28.489 14.395 1.00 91.43 O
ATOM 27 OP2 G A 7 8.927 -28.903 11.970 1.00 91.06 O
ATOM 28 O5' G A 7 6.726 -29.718 12.819 1.00 90.49 O
TER
ATOM 1 O3' G B 60 -3.487 -18.173 9.570 1.00108.58 O
ATOM 2 P A B 61 -4.141 -18.246 11.026 1.00106.97 P
ATOM 3 OP1 A B 61 -5.333 -17.362 11.015 1.00107.64 O
ATOM 4 OP2 A B 61 -3.063 -18.053 12.026 1.00106.26 O
ATOM 5 O5' A B 61 -4.623 -19.764 11.124 1.00104.39 O
ATOM 6 C5' A B 61 -5.402 -20.319 10.076 1.00102.65 C
ATOM 7 C4' A B 61 -4.921 -21.719 9.769 1.00100.09 C
ATOM 8 O4' A B 61 -3.581 -21.680 9.227 1.00 99.60 O
ATOM 9 C3' A B 61 -4.720 -22.619 10.973 1.00 98.32 C
ATOM 10 O3' A B 61 -5.958 -23.032 11.536 1.00 97.29 O
ATOM 11 C2' A B 61 -3.939 -23.747 10.308 1.00 97.19 C
ATOM 12 O2' A B 61 -4.739 -24.577 9.483 1.00 97.01 O
ATOM 13 C1' A B 61 -2.972 -22.942 9.448 1.00 97.69 C
ATOM 14 N9 A B 61 -1.650 -22.780 10.057 1.00 96.85 N
ATOM 15 C8 A B 61 -1.202 -21.746 10.833 1.00 97.42 C
ATOM 16 N7 A B 61 0.040 -21.881 11.239 1.00 96.75 N
ATOM 17 C5 A B 61 0.438 -23.091 10.695 1.00 95.79 C
ATOM 18 C6 A B 61 1.650 -23.818 10.746 1.00 94.88 C
ATOM 19 N6 A B 61 2.740 -23.413 11.403 1.00 95.02 N
ATOM 20 N1 A B 61 1.710 -24.997 10.089 1.00 94.08 N
ATOM 21 C2 A B 61 0.629 -25.421 9.418 1.00 94.15 C
ATOM 22 N3 A B 61 -0.560 -24.827 9.297 1.00 94.97 N
ATOM 23 C4 A B 61 -0.593 -23.657 9.963 1.00 95.79 C
ATOM 24 P A B 62 -6.014 -23.501 13.067 1.00 96.04 P
ATOM 25 OP1 A B 62 -7.435 -23.512 13.475 1.00 96.26 O
ATOM 26 OP2 A B 62 -5.038 -22.735 13.874 1.00 96.07 O
ATOM 27 O5' A B 62 -5.469 -24.998 12.966 1.00 94.66 O
TER
ATOM 2 P G A 6 9.693 -26.326 8.119 1.00 94.97 P
ATOM 3 OP1 G A 6 10.853 -25.861 8.915 1.00 94.83 O
ATOM 4 OP2 G A 6 9.821 -27.532 7.267 1.00 94.19 O
ATOM 5 O5' G A 6 8.447 -26.540 9.093 1.00 94.23 O
ATOM 6 C5' G A 6 8.088 -25.520 10.020 1.00 94.49 C
ATOM 7 C4' G A 6 6.730 -25.805 10.623 1.00 93.96 C
ATOM 8 O4' G A 6 5.729 -25.804 9.572 1.00 94.74 O
ATOM 9 C3' G A 6 6.569 -27.184 11.240 1.00 92.41 C
ATOM 10 O3' G A 6 7.126 -27.257 12.540 1.00 91.83 O
ATOM 11 C2' G A 6 5.051 -27.325 11.235 1.00 92.19 C
ATOM 12 O2' G A 6 4.422 -26.537 12.226 1.00 92.08 O
ATOM 13 C1' G A 6 4.742 -26.788 9.843 1.00 93.06 C
ATOM 14 N9 G A 6 4.757 -27.821 8.800 1.00 92.29 N
ATOM 15 C8 G A 6 5.764 -28.101 7.901 1.00 92.47 C
ATOM 16 N7 G A 6 5.486 -29.083 7.087 1.00 92.33 N
ATOM 17 C5 G A 6 4.211 -29.485 7.471 1.00 91.67 C
ATOM 18 C6 G A 6 3.376 -30.513 6.957 1.00 91.27 C
ATOM 19 O6 G A 6 3.603 -31.299 6.028 1.00 91.38 O
ATOM 20 N1 G A 6 2.160 -30.588 7.637 1.00 90.93 N
ATOM 21 C2 G A 6 1.791 -29.771 8.684 1.00 90.32 C
ATOM 22 N2 G A 6 0.578 -29.987 9.213 1.00 89.17 N
ATOM 23 N3 G A 6 2.562 -28.804 9.170 1.00 90.53 N
ATOM 24 C4 G A 6 3.751 -28.718 8.522 1.00 91.31 C
ATOM 25 P G A 7 7.872 -28.609 12.968 1.00 91.27 P
ATOM 26 OP1 G A 7 8.246 -28.489 14.395 1.00 91.43 O
ATOM 27 OP2 G A 7 8.927 -28.903 11.970 1.00 91.06 O
ATOM 28 O5' G A 7 6.726 -29.718 12.819 1.00 90.49 O
TER
ATOM 1 O3' G B 60 -3.487 -18.173 9.570 1.00108.58 O
ATOM 2 P A B 61 -4.141 -18.246 11.026 1.00106.97 P
ATOM 3 OP1 A B 61 -5.333 -17.362 11.015 1.00107.64 O
ATOM 4 OP2 A B 61 -3.063 -18.053 12.026 1.00106.26 O
ATOM 5 O5' A B 61 -4.623 -19.764 11.124 1.00104.39 O
ATOM 6 C5' A B 61 -5.402 -20.319 10.076 1.00102.65 C
ATOM 7 C4' A B 61 -4.921 -21.719 9.769 1.00100.09 C
ATOM 8 O4' A B 61 -3.581 -21.680 9.227 1.00 99.60 O
ATOM 9 C3' A B 61 -4.720 -22.619 10.973 1.00 98.32 C
ATOM 10 O3' A B 61 -5.958 -23.032 11.536 1.00 97.29 O
ATOM 11 C2' A B 61 -3.939 -23.747 10.308 1.00 97.19 C
ATOM 12 O2' A B 61 -4.739 -24.577 9.483 1.00 97.01 O
ATOM 13 C1' A B 61 -2.972 -22.942 9.448 1.00 97.69 C
ATOM 14 N9 A B 61 -1.650 -22.780 10.057 1.00 96.85 N
ATOM 15 C8 A B 61 -1.202 -21.746 10.833 1.00 97.42 C
ATOM 16 N7 A B 61 0.040 -21.881 11.239 1.00 96.75 N
ATOM 17 C5 A B 61 0.438 -23.091 10.695 1.00 95.79 C
ATOM 18 C6 A B 61 1.650 -23.818 10.746 1.00 94.88 C
ATOM 19 N6 A B 61 2.740 -23.413 11.403 1.00 95.02 N
ATOM 20 N1 A B 61 1.710 -24.997 10.089 1.00 94.08 N
ATOM 21 C2 A B 61 0.629 -25.421 9.418 1.00 94.15 C
ATOM 22 N3 A B 61 -0.560 -24.827 9.297 1.00 94.97 N
ATOM 23 C4 A B 61 -0.593 -23.657 9.963 1.00 95.79 C
ATOM 24 P A B 62 -6.014 -23.501 13.067 1.00 96.04 P
ATOM 25 OP1 A B 62 -7.435 -23.512 13.475 1.00 96.26 O
ATOM 26 OP2 A B 62 -5.038 -22.735 13.874 1.00 96.07 O
ATOM 27 O5' A B 62 -5.469 -24.998 12.966 1.00 94.66 O
TER
Atoms:
OP1: (10.853,-25.861,8.915)
OP2: (9.821,-27.532,7.267)
C3': (6.569,-27.184,11.240)
C1': (4.742,-26.788,9.843)
C5': (8.088,-25.520,10.020)
O6: (3.603,-31.299,6.028)
O4': (5.729,-25.804,9.572)
C8: (5.764,-28.101,7.901)
C2: (1.791,-29.771,8.684)
C6: (3.376,-30.513,6.957)
C5: (4.211,-29.485,7.471)
C4: (3.751,-28.718,8.522)
P: (9.693,-26.326,8.119)
C4': (6.730,-25.805,10.623)
C2': (5.051,-27.325,11.235)
O2': (4.422,-26.537,12.226)
N1: (2.160,-30.588,7.637)
N2: (0.578,-29.987,9.213)
N3: (2.562,-28.804,9.170)
N7: (5.486,-29.083,7.087)
N9: (4.757,-27.821,8.800)
O5': (8.447,-26.540,9.093)
O3': (7.126,-27.257,12.540)
OP2: (9.821,-27.532,7.267)
C3': (6.569,-27.184,11.240)
C1': (4.742,-26.788,9.843)
C5': (8.088,-25.520,10.020)
O6: (3.603,-31.299,6.028)
O4': (5.729,-25.804,9.572)
C8: (5.764,-28.101,7.901)
C2: (1.791,-29.771,8.684)
C6: (3.376,-30.513,6.957)
C5: (4.211,-29.485,7.471)
C4: (3.751,-28.718,8.522)
P: (9.693,-26.326,8.119)
C4': (6.730,-25.805,10.623)
C2': (5.051,-27.325,11.235)
O2': (4.422,-26.537,12.226)
N1: (2.160,-30.588,7.637)
N2: (0.578,-29.987,9.213)
N3: (2.562,-28.804,9.170)
N7: (5.486,-29.083,7.087)
N9: (4.757,-27.821,8.800)
O5': (8.447,-26.540,9.093)
O3': (7.126,-27.257,12.540)
OP1: (-5.333,-17.362,11.015)
OP2: (-3.063,-18.053,12.026)
C3': (-4.720,-22.619,10.973)
C1': (-2.972,-22.942,9.448)
C5': (-5.402,-20.319,10.076)
O4': (-3.581,-21.680,9.227)
C8: (-1.202,-21.746,10.833)
O2': (-4.739,-24.577,9.483)
C6: (1.650,-23.818,10.746)
C5: (0.438,-23.091,10.695)
C4: (-0.593,-23.657,9.963)
P: (-4.141,-18.246,11.026)
C4': (-4.921,-21.719,9.769)
C2': (-3.939,-23.747,10.308)
C2: (0.629,-25.421,9.418)
N1: (1.710,-24.997,10.089)
N3: (-0.560,-24.827,9.297)
N6: (2.740,-23.413,11.403)
N7: (0.040,-21.881,11.239)
N9: (-1.650,-22.780,10.057)
O5': (-4.623,-19.764,11.124)
O3': (-5.958,-23.032,11.536)
OP2: (-3.063,-18.053,12.026)
C3': (-4.720,-22.619,10.973)
C1': (-2.972,-22.942,9.448)
C5': (-5.402,-20.319,10.076)
O4': (-3.581,-21.680,9.227)
C8: (-1.202,-21.746,10.833)
O2': (-4.739,-24.577,9.483)
C6: (1.650,-23.818,10.746)
C5: (0.438,-23.091,10.695)
C4: (-0.593,-23.657,9.963)
P: (-4.141,-18.246,11.026)
C4': (-4.921,-21.719,9.769)
C2': (-3.939,-23.747,10.308)
C2: (0.629,-25.421,9.418)
N1: (1.710,-24.997,10.089)
N3: (-0.560,-24.827,9.297)
N6: (2.740,-23.413,11.403)
N7: (0.040,-21.881,11.239)
N9: (-1.650,-22.780,10.057)
O5': (-4.623,-19.764,11.124)
O3': (-5.958,-23.032,11.536)
Image (generated by PyMOL):