Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A63:A64
Extra
PDB:
ATOM 1 O3' C A 62 1.309 60.242 11.170 1.00 28.36 O
ATOM 2 P C A 63 2.492 60.993 11.981 1.00 32.71 P
ATOM 3 OP1 C A 63 2.708 62.242 11.220 1.00 32.76 O
ATOM 4 OP2 C A 63 3.647 60.080 12.154 1.00 33.99 O
ATOM 5 O5' C A 63 1.842 61.243 13.421 1.00 29.34 O
ATOM 6 C5' C A 63 0.707 62.074 13.601 1.00 33.34 C
ATOM 7 C4' C A 63 0.050 61.825 14.934 1.00 31.02 C
ATOM 8 O4' C A 63 -0.224 60.403 15.074 1.00 33.15 O
ATOM 9 C3' C A 63 0.849 62.152 16.190 1.00 31.74 C
ATOM 10 O3' C A 63 0.887 63.532 16.524 1.00 29.06 O
ATOM 11 C2' C A 63 0.144 61.306 17.246 1.00 31.78 C
ATOM 12 O2' C A 63 -1.054 61.930 17.685 1.00 36.51 O
ATOM 13 C1' C A 63 -0.229 60.057 16.447 1.00 29.62 C
ATOM 14 N1 C A 63 0.689 58.960 16.818 1.00 30.43 N
ATOM 15 C2 C A 63 0.418 58.328 18.032 1.00 31.74 C
ATOM 16 O2 C A 63 -0.570 58.708 18.685 1.00 31.98 O
ATOM 17 N3 C A 63 1.226 57.332 18.461 1.00 30.50 N
ATOM 18 C4 C A 63 2.267 56.957 17.715 1.00 27.89 C
ATOM 19 N4 C A 63 3.029 55.963 18.184 1.00 28.84 N
ATOM 20 C5 C A 63 2.578 57.589 16.472 1.00 29.12 C
ATOM 21 C6 C A 63 1.770 58.585 16.065 1.00 31.22 C
ATOM 22 P A A 64 2.159 64.434 16.103 1.00 37.30 P
ATOM 23 OP1 A A 64 1.709 65.115 14.877 1.00 35.95 O
ATOM 24 OP2 A A 64 3.379 63.600 16.035 1.00 30.77 O
ATOM 25 O5' A A 64 2.305 65.443 17.331 1.00 30.41 O
TER
ATOM 1 O3' C B 63 0.887 63.532 16.524 1.00 29.06 O
ATOM 2 P A B 64 2.159 64.434 16.103 1.00 37.30 P
ATOM 3 OP1 A B 64 1.709 65.115 14.877 1.00 35.95 O
ATOM 4 OP2 A B 64 3.379 63.600 16.035 1.00 30.77 O
ATOM 5 O5' A B 64 2.305 65.443 17.331 1.00 30.41 O
ATOM 6 C5' A B 64 1.480 66.594 17.400 1.00 35.46 C
ATOM 7 C4' A B 64 0.922 66.821 18.782 1.00 32.16 C
ATOM 8 O4' A B 64 0.034 65.733 19.154 1.00 32.33 O
ATOM 9 C3' A B 64 1.920 66.888 19.929 1.00 28.86 C
ATOM 10 O3' A B 64 2.612 68.124 19.998 1.00 30.69 O
ATOM 11 C2' A B 64 1.017 66.623 21.124 1.00 32.82 C
ATOM 12 O2' A B 64 0.230 67.765 21.432 1.00 33.54 O
ATOM 13 C1' A B 64 0.072 65.565 20.556 1.00 30.19 C
ATOM 14 N9 A B 64 0.516 64.200 20.905 1.00 33.72 N
ATOM 15 C8 A B 64 1.179 63.255 20.153 1.00 29.51 C
ATOM 16 N7 A B 64 1.413 62.135 20.809 1.00 27.92 N
ATOM 17 C5 A B 64 0.871 62.361 22.069 1.00 29.99 C
ATOM 18 C6 A B 64 0.793 61.575 23.237 1.00 30.99 C
ATOM 19 N6 A B 64 1.267 60.329 23.341 1.00 27.77 N
ATOM 20 N1 A B 64 0.178 62.117 24.317 1.00 32.63 N
ATOM 21 C2 A B 64 -0.310 63.360 24.225 1.00 33.61 C
ATOM 22 N3 A B 64 -0.284 64.200 23.192 1.00 31.66 N
ATOM 23 C4 A B 64 0.319 63.626 22.134 1.00 32.31 C
ATOM 24 P A B 65 4.087 68.221 20.636 1.00 35.95 P
ATOM 25 OP1 A B 65 4.609 69.581 20.346 1.00 34.69 O
ATOM 26 OP2 A B 65 4.820 67.040 20.123 1.00 37.80 O
ATOM 27 O5' A B 65 3.848 68.034 22.193 1.00 31.20 O
TER
ATOM 2 P C A 63 2.492 60.993 11.981 1.00 32.71 P
ATOM 3 OP1 C A 63 2.708 62.242 11.220 1.00 32.76 O
ATOM 4 OP2 C A 63 3.647 60.080 12.154 1.00 33.99 O
ATOM 5 O5' C A 63 1.842 61.243 13.421 1.00 29.34 O
ATOM 6 C5' C A 63 0.707 62.074 13.601 1.00 33.34 C
ATOM 7 C4' C A 63 0.050 61.825 14.934 1.00 31.02 C
ATOM 8 O4' C A 63 -0.224 60.403 15.074 1.00 33.15 O
ATOM 9 C3' C A 63 0.849 62.152 16.190 1.00 31.74 C
ATOM 10 O3' C A 63 0.887 63.532 16.524 1.00 29.06 O
ATOM 11 C2' C A 63 0.144 61.306 17.246 1.00 31.78 C
ATOM 12 O2' C A 63 -1.054 61.930 17.685 1.00 36.51 O
ATOM 13 C1' C A 63 -0.229 60.057 16.447 1.00 29.62 C
ATOM 14 N1 C A 63 0.689 58.960 16.818 1.00 30.43 N
ATOM 15 C2 C A 63 0.418 58.328 18.032 1.00 31.74 C
ATOM 16 O2 C A 63 -0.570 58.708 18.685 1.00 31.98 O
ATOM 17 N3 C A 63 1.226 57.332 18.461 1.00 30.50 N
ATOM 18 C4 C A 63 2.267 56.957 17.715 1.00 27.89 C
ATOM 19 N4 C A 63 3.029 55.963 18.184 1.00 28.84 N
ATOM 20 C5 C A 63 2.578 57.589 16.472 1.00 29.12 C
ATOM 21 C6 C A 63 1.770 58.585 16.065 1.00 31.22 C
ATOM 22 P A A 64 2.159 64.434 16.103 1.00 37.30 P
ATOM 23 OP1 A A 64 1.709 65.115 14.877 1.00 35.95 O
ATOM 24 OP2 A A 64 3.379 63.600 16.035 1.00 30.77 O
ATOM 25 O5' A A 64 2.305 65.443 17.331 1.00 30.41 O
TER
ATOM 1 O3' C B 63 0.887 63.532 16.524 1.00 29.06 O
ATOM 2 P A B 64 2.159 64.434 16.103 1.00 37.30 P
ATOM 3 OP1 A B 64 1.709 65.115 14.877 1.00 35.95 O
ATOM 4 OP2 A B 64 3.379 63.600 16.035 1.00 30.77 O
ATOM 5 O5' A B 64 2.305 65.443 17.331 1.00 30.41 O
ATOM 6 C5' A B 64 1.480 66.594 17.400 1.00 35.46 C
ATOM 7 C4' A B 64 0.922 66.821 18.782 1.00 32.16 C
ATOM 8 O4' A B 64 0.034 65.733 19.154 1.00 32.33 O
ATOM 9 C3' A B 64 1.920 66.888 19.929 1.00 28.86 C
ATOM 10 O3' A B 64 2.612 68.124 19.998 1.00 30.69 O
ATOM 11 C2' A B 64 1.017 66.623 21.124 1.00 32.82 C
ATOM 12 O2' A B 64 0.230 67.765 21.432 1.00 33.54 O
ATOM 13 C1' A B 64 0.072 65.565 20.556 1.00 30.19 C
ATOM 14 N9 A B 64 0.516 64.200 20.905 1.00 33.72 N
ATOM 15 C8 A B 64 1.179 63.255 20.153 1.00 29.51 C
ATOM 16 N7 A B 64 1.413 62.135 20.809 1.00 27.92 N
ATOM 17 C5 A B 64 0.871 62.361 22.069 1.00 29.99 C
ATOM 18 C6 A B 64 0.793 61.575 23.237 1.00 30.99 C
ATOM 19 N6 A B 64 1.267 60.329 23.341 1.00 27.77 N
ATOM 20 N1 A B 64 0.178 62.117 24.317 1.00 32.63 N
ATOM 21 C2 A B 64 -0.310 63.360 24.225 1.00 33.61 C
ATOM 22 N3 A B 64 -0.284 64.200 23.192 1.00 31.66 N
ATOM 23 C4 A B 64 0.319 63.626 22.134 1.00 32.31 C
ATOM 24 P A B 65 4.087 68.221 20.636 1.00 35.95 P
ATOM 25 OP1 A B 65 4.609 69.581 20.346 1.00 34.69 O
ATOM 26 OP2 A B 65 4.820 67.040 20.123 1.00 37.80 O
ATOM 27 O5' A B 65 3.848 68.034 22.193 1.00 31.20 O
TER
Atoms:
C2: (0.418,58.328,18.032)
OP1: (2.708,62.242,11.220)
OP2: (3.647,60.080,12.154)
C4: (2.267,56.957,17.715)
O5': (1.842,61.243,13.421)
C3': (0.849,62.152,16.190)
C1': (-0.229,60.057,16.447)
O4': (-0.224,60.403,15.074)
C5': (0.707,62.074,13.601)
P: (2.492,60.993,11.981)
O2: (-0.570,58.708,18.685)
C4': (0.050,61.825,14.934)
C2': (0.144,61.306,17.246)
O2': (-1.054,61.930,17.685)
N1: (0.689,58.960,16.818)
N3: (1.226,57.332,18.461)
N4: (3.029,55.963,18.184)
C6: (1.770,58.585,16.065)
C5: (2.578,57.589,16.472)
O3': (0.887,63.532,16.524)
OP1: (2.708,62.242,11.220)
OP2: (3.647,60.080,12.154)
C4: (2.267,56.957,17.715)
O5': (1.842,61.243,13.421)
C3': (0.849,62.152,16.190)
C1': (-0.229,60.057,16.447)
O4': (-0.224,60.403,15.074)
C5': (0.707,62.074,13.601)
P: (2.492,60.993,11.981)
O2: (-0.570,58.708,18.685)
C4': (0.050,61.825,14.934)
C2': (0.144,61.306,17.246)
O2': (-1.054,61.930,17.685)
N1: (0.689,58.960,16.818)
N3: (1.226,57.332,18.461)
N4: (3.029,55.963,18.184)
C6: (1.770,58.585,16.065)
C5: (2.578,57.589,16.472)
O3': (0.887,63.532,16.524)
OP1: (1.709,65.115,14.877)
OP2: (3.379,63.600,16.035)
C3': (1.920,66.888,19.929)
C1': (0.072,65.565,20.556)
C5': (1.480,66.594,17.400)
O4': (0.034,65.733,19.154)
C8: (1.179,63.255,20.153)
O2': (0.230,67.765,21.432)
C6: (0.793,61.575,23.237)
C5: (0.871,62.361,22.069)
C4: (0.319,63.626,22.134)
P: (2.159,64.434,16.103)
C4': (0.922,66.821,18.782)
C2': (1.017,66.623,21.124)
C2: (-0.310,63.360,24.225)
N1: (0.178,62.117,24.317)
N3: (-0.284,64.200,23.192)
N6: (1.267,60.329,23.341)
N7: (1.413,62.135,20.809)
N9: (0.516,64.200,20.905)
O5': (2.305,65.443,17.331)
O3': (2.612,68.124,19.998)
OP2: (3.379,63.600,16.035)
C3': (1.920,66.888,19.929)
C1': (0.072,65.565,20.556)
C5': (1.480,66.594,17.400)
O4': (0.034,65.733,19.154)
C8: (1.179,63.255,20.153)
O2': (0.230,67.765,21.432)
C6: (0.793,61.575,23.237)
C5: (0.871,62.361,22.069)
C4: (0.319,63.626,22.134)
P: (2.159,64.434,16.103)
C4': (0.922,66.821,18.782)
C2': (1.017,66.623,21.124)
C2: (-0.310,63.360,24.225)
N1: (0.178,62.117,24.317)
N3: (-0.284,64.200,23.192)
N6: (1.267,60.329,23.341)
N7: (1.413,62.135,20.809)
N9: (0.516,64.200,20.905)
O5': (2.305,65.443,17.331)
O3': (2.612,68.124,19.998)
Image (generated by PyMOL):