Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X20:X73
Extra
PDB:
ATOM 1 O3' U A 19 9.982 5.196 25.693 1.00 31.51 O
ATOM 2 P C A 20 9.764 3.734 25.047 1.00 35.87 P
ATOM 3 OP1 C A 20 9.579 3.840 23.582 1.00 32.57 O
ATOM 4 OP2 C A 20 8.652 3.238 25.885 1.00 34.82 O
ATOM 5 O5' C A 20 11.118 2.977 25.417 1.00 29.16 O
ATOM 6 C5' C A 20 11.371 1.643 25.003 1.00 32.78 C
ATOM 7 C4' C A 20 12.010 0.864 26.116 1.00 33.93 C
ATOM 8 O4' C A 20 13.173 1.597 26.581 1.00 32.14 O
ATOM 9 C3' C A 20 11.158 0.666 27.360 1.00 34.33 C
ATOM 10 O3' C A 20 10.293 -0.458 27.259 1.00 35.80 O
ATOM 11 C2' C A 20 12.213 0.506 28.442 1.00 31.63 C
ATOM 12 O2' C A 20 12.724 -0.818 28.397 1.00 35.95 O
ATOM 13 C1' C A 20 13.307 1.472 27.978 1.00 31.22 C
ATOM 14 N1 C A 20 13.170 2.831 28.553 1.00 30.61 N
ATOM 15 C2 C A 20 13.344 3.001 29.923 1.00 30.05 C
ATOM 16 O2 C A 20 13.616 2.004 30.604 1.00 35.65 O
ATOM 17 N3 C A 20 13.209 4.227 30.472 1.00 31.71 N
ATOM 18 C4 C A 20 12.925 5.269 29.691 1.00 28.60 C
ATOM 19 N4 C A 20 12.804 6.459 30.267 1.00 29.19 N
ATOM 20 C5 C A 20 12.750 5.134 28.285 1.00 29.17 C
ATOM 21 C6 C A 20 12.872 3.904 27.765 1.00 30.19 C
ATOM 22 P C A 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 23 OP1 C A 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 24 OP2 C A 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 25 O5' C A 21 8.870 -0.061 29.331 1.00 38.51 O
TER
ATOM 1 O3' A B 72 15.681 1.168 20.862 1.00 32.34 O
ATOM 2 P A B 73 15.044 1.350 22.322 1.00 33.20 P
ATOM 3 OP1 A B 73 15.704 0.347 23.197 1.00 34.83 O
ATOM 4 OP2 A B 73 13.567 1.385 22.163 1.00 31.15 O
ATOM 5 O5' A B 73 15.636 2.785 22.682 1.00 31.04 O
ATOM 6 C5' A B 73 15.092 3.978 22.145 1.00 30.04 C
ATOM 7 C4' A B 73 15.354 5.120 23.091 1.00 22.34 C
ATOM 8 O4' A B 73 14.718 4.835 24.364 1.00 23.15 O
ATOM 9 C3' A B 73 16.811 5.348 23.447 1.00 23.14 C
ATOM 10 O3' A B 73 17.505 6.069 22.441 1.00 23.42 O
ATOM 11 C2' A B 73 16.703 6.072 24.785 1.00 20.75 C
ATOM 12 O2' A B 73 16.306 7.415 24.587 1.00 22.15 O
ATOM 13 C1' A B 73 15.508 5.357 25.411 1.00 24.61 C
ATOM 14 N9 A B 73 15.935 4.266 26.295 1.00 23.36 N
ATOM 15 C8 A B 73 16.041 2.926 26.040 1.00 25.18 C
ATOM 16 N7 A B 73 16.452 2.246 27.078 1.00 22.97 N
ATOM 17 C5 A B 73 16.621 3.206 28.073 1.00 25.89 C
ATOM 18 C6 A B 73 17.041 3.151 29.412 1.00 27.77 C
ATOM 19 N6 A B 73 17.392 2.026 30.031 1.00 31.01 N
ATOM 20 N1 A B 73 17.100 4.304 30.113 1.00 29.46 N
ATOM 21 C2 A B 73 16.748 5.443 29.506 1.00 27.42 C
ATOM 22 N3 A B 73 16.335 5.617 28.253 1.00 23.75 N
ATOM 23 C4 A B 73 16.302 4.454 27.593 1.00 24.42 C
ATOM 24 P C B 74 18.973 5.657 21.936 1.00 23.07 P
ATOM 25 OP1 C B 74 19.282 6.681 20.916 1.00 23.48 O
ATOM 26 OP2 C B 74 18.881 4.224 21.574 1.00 21.94 O
ATOM 27 O5' C B 74 19.928 5.825 23.211 1.00 22.63 O
TER
ATOM 2 P C A 20 9.764 3.734 25.047 1.00 35.87 P
ATOM 3 OP1 C A 20 9.579 3.840 23.582 1.00 32.57 O
ATOM 4 OP2 C A 20 8.652 3.238 25.885 1.00 34.82 O
ATOM 5 O5' C A 20 11.118 2.977 25.417 1.00 29.16 O
ATOM 6 C5' C A 20 11.371 1.643 25.003 1.00 32.78 C
ATOM 7 C4' C A 20 12.010 0.864 26.116 1.00 33.93 C
ATOM 8 O4' C A 20 13.173 1.597 26.581 1.00 32.14 O
ATOM 9 C3' C A 20 11.158 0.666 27.360 1.00 34.33 C
ATOM 10 O3' C A 20 10.293 -0.458 27.259 1.00 35.80 O
ATOM 11 C2' C A 20 12.213 0.506 28.442 1.00 31.63 C
ATOM 12 O2' C A 20 12.724 -0.818 28.397 1.00 35.95 O
ATOM 13 C1' C A 20 13.307 1.472 27.978 1.00 31.22 C
ATOM 14 N1 C A 20 13.170 2.831 28.553 1.00 30.61 N
ATOM 15 C2 C A 20 13.344 3.001 29.923 1.00 30.05 C
ATOM 16 O2 C A 20 13.616 2.004 30.604 1.00 35.65 O
ATOM 17 N3 C A 20 13.209 4.227 30.472 1.00 31.71 N
ATOM 18 C4 C A 20 12.925 5.269 29.691 1.00 28.60 C
ATOM 19 N4 C A 20 12.804 6.459 30.267 1.00 29.19 N
ATOM 20 C5 C A 20 12.750 5.134 28.285 1.00 29.17 C
ATOM 21 C6 C A 20 12.872 3.904 27.765 1.00 30.19 C
ATOM 22 P C A 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 23 OP1 C A 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 24 OP2 C A 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 25 O5' C A 21 8.870 -0.061 29.331 1.00 38.51 O
TER
ATOM 1 O3' A B 72 15.681 1.168 20.862 1.00 32.34 O
ATOM 2 P A B 73 15.044 1.350 22.322 1.00 33.20 P
ATOM 3 OP1 A B 73 15.704 0.347 23.197 1.00 34.83 O
ATOM 4 OP2 A B 73 13.567 1.385 22.163 1.00 31.15 O
ATOM 5 O5' A B 73 15.636 2.785 22.682 1.00 31.04 O
ATOM 6 C5' A B 73 15.092 3.978 22.145 1.00 30.04 C
ATOM 7 C4' A B 73 15.354 5.120 23.091 1.00 22.34 C
ATOM 8 O4' A B 73 14.718 4.835 24.364 1.00 23.15 O
ATOM 9 C3' A B 73 16.811 5.348 23.447 1.00 23.14 C
ATOM 10 O3' A B 73 17.505 6.069 22.441 1.00 23.42 O
ATOM 11 C2' A B 73 16.703 6.072 24.785 1.00 20.75 C
ATOM 12 O2' A B 73 16.306 7.415 24.587 1.00 22.15 O
ATOM 13 C1' A B 73 15.508 5.357 25.411 1.00 24.61 C
ATOM 14 N9 A B 73 15.935 4.266 26.295 1.00 23.36 N
ATOM 15 C8 A B 73 16.041 2.926 26.040 1.00 25.18 C
ATOM 16 N7 A B 73 16.452 2.246 27.078 1.00 22.97 N
ATOM 17 C5 A B 73 16.621 3.206 28.073 1.00 25.89 C
ATOM 18 C6 A B 73 17.041 3.151 29.412 1.00 27.77 C
ATOM 19 N6 A B 73 17.392 2.026 30.031 1.00 31.01 N
ATOM 20 N1 A B 73 17.100 4.304 30.113 1.00 29.46 N
ATOM 21 C2 A B 73 16.748 5.443 29.506 1.00 27.42 C
ATOM 22 N3 A B 73 16.335 5.617 28.253 1.00 23.75 N
ATOM 23 C4 A B 73 16.302 4.454 27.593 1.00 24.42 C
ATOM 24 P C B 74 18.973 5.657 21.936 1.00 23.07 P
ATOM 25 OP1 C B 74 19.282 6.681 20.916 1.00 23.48 O
ATOM 26 OP2 C B 74 18.881 4.224 21.574 1.00 21.94 O
ATOM 27 O5' C B 74 19.928 5.825 23.211 1.00 22.63 O
TER
Atoms:
C2: (13.344,3.001,29.923)
OP1: (9.579,3.840,23.582)
OP2: (8.652,3.238,25.885)
C4: (12.925,5.269,29.691)
O5': (11.118,2.977,25.417)
C3': (11.158,0.666,27.360)
C1': (13.307,1.472,27.978)
O4': (13.173,1.597,26.581)
C5': (11.371,1.643,25.003)
P: (9.764,3.734,25.047)
O2: (13.616,2.004,30.604)
C4': (12.010,0.864,26.116)
C2': (12.213,0.506,28.442)
O2': (12.724,-0.818,28.397)
N1: (13.170,2.831,28.553)
N3: (13.209,4.227,30.472)
N4: (12.804,6.459,30.267)
C6: (12.872,3.904,27.765)
C5: (12.750,5.134,28.285)
O3': (10.293,-0.458,27.259)
OP1: (9.579,3.840,23.582)
OP2: (8.652,3.238,25.885)
C4: (12.925,5.269,29.691)
O5': (11.118,2.977,25.417)
C3': (11.158,0.666,27.360)
C1': (13.307,1.472,27.978)
O4': (13.173,1.597,26.581)
C5': (11.371,1.643,25.003)
P: (9.764,3.734,25.047)
O2: (13.616,2.004,30.604)
C4': (12.010,0.864,26.116)
C2': (12.213,0.506,28.442)
O2': (12.724,-0.818,28.397)
N1: (13.170,2.831,28.553)
N3: (13.209,4.227,30.472)
N4: (12.804,6.459,30.267)
C6: (12.872,3.904,27.765)
C5: (12.750,5.134,28.285)
O3': (10.293,-0.458,27.259)
OP1: (15.704,0.347,23.197)
OP2: (13.567,1.385,22.163)
C3': (16.811,5.348,23.447)
C1': (15.508,5.357,25.411)
C5': (15.092,3.978,22.145)
O4': (14.718,4.835,24.364)
C8: (16.041,2.926,26.040)
O2': (16.306,7.415,24.587)
C6: (17.041,3.151,29.412)
C5: (16.621,3.206,28.073)
C4: (16.302,4.454,27.593)
P: (15.044,1.350,22.322)
C4': (15.354,5.120,23.091)
C2': (16.703,6.072,24.785)
C2: (16.748,5.443,29.506)
N1: (17.100,4.304,30.113)
N3: (16.335,5.617,28.253)
N6: (17.392,2.026,30.031)
N7: (16.452,2.246,27.078)
N9: (15.935,4.266,26.295)
O5': (15.636,2.785,22.682)
O3': (17.505,6.069,22.441)
OP2: (13.567,1.385,22.163)
C3': (16.811,5.348,23.447)
C1': (15.508,5.357,25.411)
C5': (15.092,3.978,22.145)
O4': (14.718,4.835,24.364)
C8: (16.041,2.926,26.040)
O2': (16.306,7.415,24.587)
C6: (17.041,3.151,29.412)
C5: (16.621,3.206,28.073)
C4: (16.302,4.454,27.593)
P: (15.044,1.350,22.322)
C4': (15.354,5.120,23.091)
C2': (16.703,6.072,24.785)
C2: (16.748,5.443,29.506)
N1: (17.100,4.304,30.113)
N3: (16.335,5.617,28.253)
N6: (17.392,2.026,30.031)
N7: (16.452,2.246,27.078)
N9: (15.935,4.266,26.295)
O5': (15.636,2.785,22.682)
O3': (17.505,6.069,22.441)
Image (generated by PyMOL):