Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXE:A62:B6
Extra
PDB:
ATOM 1 O3' G A 61 -19.340 -45.282 6.205 1.00 74.65 O
ATOM 2 P A A 62 -17.906 -45.998 6.266 1.00 73.77 P
ATOM 3 OP1 A A 62 -17.551 -46.405 4.885 1.00 74.93 O
ATOM 4 OP2 A A 62 -17.914 -47.000 7.360 1.00 72.68 O
ATOM 5 O5' A A 62 -16.949 -44.806 6.707 1.00 71.77 O
ATOM 6 C5' A A 62 -17.104 -43.532 6.101 1.00 71.02 C
ATOM 7 C4' A A 62 -16.897 -42.455 7.140 1.00 68.90 C
ATOM 8 O4' A A 62 -17.981 -42.481 8.101 1.00 68.15 O
ATOM 9 C3' A A 62 -15.684 -42.668 8.024 1.00 67.44 C
ATOM 10 O3' A A 62 -14.481 -42.356 7.342 1.00 66.75 O
ATOM 11 C2' A A 62 -16.018 -41.739 9.184 1.00 66.33 C
ATOM 12 O2' A A 62 -15.861 -40.366 8.869 1.00 66.35 O
ATOM 13 C1' A A 62 -17.495 -42.076 9.370 1.00 66.40 C
ATOM 14 N9 A A 62 -17.753 -43.123 10.361 1.00 65.40 N
ATOM 15 C8 A A 62 -17.883 -44.467 10.139 1.00 65.77 C
ATOM 16 N7 A A 62 -18.113 -45.168 11.224 1.00 65.20 N
ATOM 17 C5 A A 62 -18.136 -44.218 12.231 1.00 64.17 C
ATOM 18 C6 A A 62 -18.335 -44.312 13.625 1.00 63.25 C
ATOM 19 N6 A A 62 -18.554 -45.473 14.254 1.00 63.22 N
ATOM 20 N1 A A 62 -18.301 -43.168 14.350 1.00 62.39 N
ATOM 21 C2 A A 62 -18.078 -42.006 13.718 1.00 62.38 C
ATOM 22 N3 A A 62 -17.875 -41.796 12.416 1.00 63.32 N
ATOM 23 C4 A A 62 -17.918 -42.950 11.719 1.00 64.24 C
ATOM 24 P A A 63 -13.137 -43.101 7.796 1.00 65.91 P
ATOM 25 OP1 A A 63 -12.120 -42.890 6.738 1.00 66.69 O
ATOM 26 OP2 A A 63 -13.460 -44.486 8.220 1.00 65.22 O
ATOM 27 O5' A A 63 -12.734 -42.238 9.085 1.00 63.82 O
TER
ATOM 1 O3' U B 5 -24.048 -43.765 19.933 1.00 59.72 O
ATOM 2 P G B 6 -23.043 -43.707 21.179 1.00 58.96 P
ATOM 3 OP1 G B 6 -23.288 -44.924 21.984 1.00 58.99 O
ATOM 4 OP2 G B 6 -23.110 -42.374 21.824 1.00 58.70 O
ATOM 5 O5' G B 6 -21.603 -43.794 20.490 1.00 58.16 O
ATOM 6 C5' G B 6 -21.161 -44.953 19.783 1.00 56.89 C
ATOM 7 C4' G B 6 -19.923 -44.625 18.970 1.00 55.88 C
ATOM 8 O4' G B 6 -20.222 -43.594 17.997 1.00 55.94 O
ATOM 9 C3' G B 6 -18.773 -44.018 19.755 1.00 54.99 C
ATOM 10 O3' G B 6 -18.052 -45.006 20.447 1.00 54.41 O
ATOM 11 C2' G B 6 -17.961 -43.386 18.634 1.00 54.95 C
ATOM 12 O2' G B 6 -17.246 -44.332 17.865 1.00 55.24 O
ATOM 13 C1' G B 6 -19.085 -42.768 17.814 1.00 55.48 C
ATOM 14 N9 G B 6 -19.378 -41.399 18.238 1.00 55.48 N
ATOM 15 C8 G B 6 -20.412 -40.960 19.033 1.00 55.70 C
ATOM 16 N7 G B 6 -20.398 -39.671 19.242 1.00 55.96 N
ATOM 17 C5 G B 6 -19.282 -39.224 18.545 1.00 55.58 C
ATOM 18 C6 G B 6 -18.746 -37.918 18.397 1.00 55.63 C
ATOM 19 O6 G B 6 -19.166 -36.854 18.865 1.00 56.00 O
ATOM 20 N1 G B 6 -17.601 -37.903 17.604 1.00 55.61 N
ATOM 21 C2 G B 6 -17.036 -39.018 17.028 1.00 55.49 C
ATOM 22 N2 G B 6 -15.934 -38.815 16.294 1.00 55.28 N
ATOM 23 N3 G B 6 -17.526 -40.245 17.157 1.00 55.33 N
ATOM 24 C4 G B 6 -18.646 -40.276 17.923 1.00 55.32 C
ATOM 25 P G B 7 -17.502 -44.683 21.913 1.00 54.32 P
ATOM 26 OP1 G B 7 -16.698 -45.855 22.337 1.00 54.15 O
ATOM 27 OP2 G B 7 -18.626 -44.222 22.761 1.00 54.19 O
ATOM 28 O5' G B 7 -16.551 -43.418 21.677 1.00 53.53 O
TER
ATOM 2 P A A 62 -17.906 -45.998 6.266 1.00 73.77 P
ATOM 3 OP1 A A 62 -17.551 -46.405 4.885 1.00 74.93 O
ATOM 4 OP2 A A 62 -17.914 -47.000 7.360 1.00 72.68 O
ATOM 5 O5' A A 62 -16.949 -44.806 6.707 1.00 71.77 O
ATOM 6 C5' A A 62 -17.104 -43.532 6.101 1.00 71.02 C
ATOM 7 C4' A A 62 -16.897 -42.455 7.140 1.00 68.90 C
ATOM 8 O4' A A 62 -17.981 -42.481 8.101 1.00 68.15 O
ATOM 9 C3' A A 62 -15.684 -42.668 8.024 1.00 67.44 C
ATOM 10 O3' A A 62 -14.481 -42.356 7.342 1.00 66.75 O
ATOM 11 C2' A A 62 -16.018 -41.739 9.184 1.00 66.33 C
ATOM 12 O2' A A 62 -15.861 -40.366 8.869 1.00 66.35 O
ATOM 13 C1' A A 62 -17.495 -42.076 9.370 1.00 66.40 C
ATOM 14 N9 A A 62 -17.753 -43.123 10.361 1.00 65.40 N
ATOM 15 C8 A A 62 -17.883 -44.467 10.139 1.00 65.77 C
ATOM 16 N7 A A 62 -18.113 -45.168 11.224 1.00 65.20 N
ATOM 17 C5 A A 62 -18.136 -44.218 12.231 1.00 64.17 C
ATOM 18 C6 A A 62 -18.335 -44.312 13.625 1.00 63.25 C
ATOM 19 N6 A A 62 -18.554 -45.473 14.254 1.00 63.22 N
ATOM 20 N1 A A 62 -18.301 -43.168 14.350 1.00 62.39 N
ATOM 21 C2 A A 62 -18.078 -42.006 13.718 1.00 62.38 C
ATOM 22 N3 A A 62 -17.875 -41.796 12.416 1.00 63.32 N
ATOM 23 C4 A A 62 -17.918 -42.950 11.719 1.00 64.24 C
ATOM 24 P A A 63 -13.137 -43.101 7.796 1.00 65.91 P
ATOM 25 OP1 A A 63 -12.120 -42.890 6.738 1.00 66.69 O
ATOM 26 OP2 A A 63 -13.460 -44.486 8.220 1.00 65.22 O
ATOM 27 O5' A A 63 -12.734 -42.238 9.085 1.00 63.82 O
TER
ATOM 1 O3' U B 5 -24.048 -43.765 19.933 1.00 59.72 O
ATOM 2 P G B 6 -23.043 -43.707 21.179 1.00 58.96 P
ATOM 3 OP1 G B 6 -23.288 -44.924 21.984 1.00 58.99 O
ATOM 4 OP2 G B 6 -23.110 -42.374 21.824 1.00 58.70 O
ATOM 5 O5' G B 6 -21.603 -43.794 20.490 1.00 58.16 O
ATOM 6 C5' G B 6 -21.161 -44.953 19.783 1.00 56.89 C
ATOM 7 C4' G B 6 -19.923 -44.625 18.970 1.00 55.88 C
ATOM 8 O4' G B 6 -20.222 -43.594 17.997 1.00 55.94 O
ATOM 9 C3' G B 6 -18.773 -44.018 19.755 1.00 54.99 C
ATOM 10 O3' G B 6 -18.052 -45.006 20.447 1.00 54.41 O
ATOM 11 C2' G B 6 -17.961 -43.386 18.634 1.00 54.95 C
ATOM 12 O2' G B 6 -17.246 -44.332 17.865 1.00 55.24 O
ATOM 13 C1' G B 6 -19.085 -42.768 17.814 1.00 55.48 C
ATOM 14 N9 G B 6 -19.378 -41.399 18.238 1.00 55.48 N
ATOM 15 C8 G B 6 -20.412 -40.960 19.033 1.00 55.70 C
ATOM 16 N7 G B 6 -20.398 -39.671 19.242 1.00 55.96 N
ATOM 17 C5 G B 6 -19.282 -39.224 18.545 1.00 55.58 C
ATOM 18 C6 G B 6 -18.746 -37.918 18.397 1.00 55.63 C
ATOM 19 O6 G B 6 -19.166 -36.854 18.865 1.00 56.00 O
ATOM 20 N1 G B 6 -17.601 -37.903 17.604 1.00 55.61 N
ATOM 21 C2 G B 6 -17.036 -39.018 17.028 1.00 55.49 C
ATOM 22 N2 G B 6 -15.934 -38.815 16.294 1.00 55.28 N
ATOM 23 N3 G B 6 -17.526 -40.245 17.157 1.00 55.33 N
ATOM 24 C4 G B 6 -18.646 -40.276 17.923 1.00 55.32 C
ATOM 25 P G B 7 -17.502 -44.683 21.913 1.00 54.32 P
ATOM 26 OP1 G B 7 -16.698 -45.855 22.337 1.00 54.15 O
ATOM 27 OP2 G B 7 -18.626 -44.222 22.761 1.00 54.19 O
ATOM 28 O5' G B 7 -16.551 -43.418 21.677 1.00 53.53 O
TER
Atoms:
OP1: (-17.551,-46.405,4.885)
OP2: (-17.914,-47.000,7.360)
C3': (-15.684,-42.668,8.024)
C1': (-17.495,-42.076,9.370)
C5': (-17.104,-43.532,6.101)
O4': (-17.981,-42.481,8.101)
C8: (-17.883,-44.467,10.139)
O2': (-15.861,-40.366,8.869)
C6: (-18.335,-44.312,13.625)
C5: (-18.136,-44.218,12.231)
C4: (-17.918,-42.950,11.719)
P: (-17.906,-45.998,6.266)
C4': (-16.897,-42.455,7.140)
C2': (-16.018,-41.739,9.184)
C2: (-18.078,-42.006,13.718)
N1: (-18.301,-43.168,14.350)
N3: (-17.875,-41.796,12.416)
N6: (-18.554,-45.473,14.254)
N7: (-18.113,-45.168,11.224)
N9: (-17.753,-43.123,10.361)
O5': (-16.949,-44.806,6.707)
O3': (-14.481,-42.356,7.342)
OP2: (-17.914,-47.000,7.360)
C3': (-15.684,-42.668,8.024)
C1': (-17.495,-42.076,9.370)
C5': (-17.104,-43.532,6.101)
O4': (-17.981,-42.481,8.101)
C8: (-17.883,-44.467,10.139)
O2': (-15.861,-40.366,8.869)
C6: (-18.335,-44.312,13.625)
C5: (-18.136,-44.218,12.231)
C4: (-17.918,-42.950,11.719)
P: (-17.906,-45.998,6.266)
C4': (-16.897,-42.455,7.140)
C2': (-16.018,-41.739,9.184)
C2: (-18.078,-42.006,13.718)
N1: (-18.301,-43.168,14.350)
N3: (-17.875,-41.796,12.416)
N6: (-18.554,-45.473,14.254)
N7: (-18.113,-45.168,11.224)
N9: (-17.753,-43.123,10.361)
O5': (-16.949,-44.806,6.707)
O3': (-14.481,-42.356,7.342)
OP1: (-23.288,-44.924,21.984)
OP2: (-23.110,-42.374,21.824)
C3': (-18.773,-44.018,19.755)
C1': (-19.085,-42.768,17.814)
C5': (-21.161,-44.953,19.783)
O6: (-19.166,-36.854,18.865)
O4': (-20.222,-43.594,17.997)
C8: (-20.412,-40.960,19.033)
C2: (-17.036,-39.018,17.028)
C6: (-18.746,-37.918,18.397)
C5: (-19.282,-39.224,18.545)
C4: (-18.646,-40.276,17.923)
P: (-23.043,-43.707,21.179)
C4': (-19.923,-44.625,18.970)
C2': (-17.961,-43.386,18.634)
O2': (-17.246,-44.332,17.865)
N1: (-17.601,-37.903,17.604)
N2: (-15.934,-38.815,16.294)
N3: (-17.526,-40.245,17.157)
N7: (-20.398,-39.671,19.242)
N9: (-19.378,-41.399,18.238)
O5': (-21.603,-43.794,20.490)
O3': (-18.052,-45.006,20.447)
OP2: (-23.110,-42.374,21.824)
C3': (-18.773,-44.018,19.755)
C1': (-19.085,-42.768,17.814)
C5': (-21.161,-44.953,19.783)
O6: (-19.166,-36.854,18.865)
O4': (-20.222,-43.594,17.997)
C8: (-20.412,-40.960,19.033)
C2: (-17.036,-39.018,17.028)
C6: (-18.746,-37.918,18.397)
C5: (-19.282,-39.224,18.545)
C4: (-18.646,-40.276,17.923)
P: (-23.043,-43.707,21.179)
C4': (-19.923,-44.625,18.970)
C2': (-17.961,-43.386,18.634)
O2': (-17.246,-44.332,17.865)
N1: (-17.601,-37.903,17.604)
N2: (-15.934,-38.815,16.294)
N3: (-17.526,-40.245,17.157)
N7: (-20.398,-39.671,19.242)
N9: (-19.378,-41.399,18.238)
O5': (-21.603,-43.794,20.490)
O3': (-18.052,-45.006,20.447)
Image (generated by PyMOL):