Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A62:B6
Extra
PDB:
ATOM 1 O3' G A 61 -19.225 -45.410 5.901 1.00 68.08 O
ATOM 2 P A A 62 -17.740 -46.015 5.877 1.00 67.50 P
ATOM 3 OP1 A A 62 -17.382 -46.273 4.463 1.00 69.28 O
ATOM 4 OP2 A A 62 -17.651 -47.102 6.882 1.00 66.78 O
ATOM 5 O5' A A 62 -16.849 -44.804 6.398 1.00 65.29 O
ATOM 6 C5' A A 62 -17.017 -43.510 5.839 1.00 63.88 C
ATOM 7 C4' A A 62 -16.838 -42.476 6.929 1.00 61.13 C
ATOM 8 O4' A A 62 -17.929 -42.570 7.875 1.00 60.32 O
ATOM 9 C3' A A 62 -15.632 -42.693 7.822 1.00 59.07 C
ATOM 10 O3' A A 62 -14.439 -42.313 7.170 1.00 58.06 O
ATOM 11 C2' A A 62 -15.998 -41.797 8.995 1.00 58.03 C
ATOM 12 O2' A A 62 -15.856 -40.420 8.706 1.00 58.35 O
ATOM 13 C1' A A 62 -17.475 -42.136 9.145 1.00 58.28 C
ATOM 14 N9 A A 62 -17.752 -43.161 10.149 1.00 57.23 N
ATOM 15 C8 A A 62 -17.875 -44.509 9.955 1.00 57.60 C
ATOM 16 N7 A A 62 -18.127 -45.182 11.052 1.00 56.90 N
ATOM 17 C5 A A 62 -18.172 -44.207 12.032 1.00 55.68 C
ATOM 18 C6 A A 62 -18.402 -44.266 13.421 1.00 54.76 C
ATOM 19 N6 A A 62 -18.634 -45.406 14.078 1.00 54.65 N
ATOM 20 N1 A A 62 -18.382 -43.103 14.109 1.00 54.38 N
ATOM 21 C2 A A 62 -18.146 -41.956 13.455 1.00 54.43 C
ATOM 22 N3 A A 62 -17.918 -41.779 12.154 1.00 55.07 N
ATOM 23 C4 A A 62 -17.945 -42.953 11.494 1.00 55.87 C
ATOM 24 P A A 63 -13.076 -43.054 7.565 1.00 56.89 P
ATOM 25 OP1 A A 63 -12.099 -42.813 6.479 1.00 57.36 O
ATOM 26 OP2 A A 63 -13.377 -44.444 7.986 1.00 56.15 O
ATOM 27 O5' A A 63 -12.643 -42.225 8.864 1.00 55.52 O
TER
ATOM 1 O3' U B 5 -24.299 -43.956 19.529 1.00 51.60 O
ATOM 2 P G B 6 -23.296 -43.913 20.770 1.00 51.47 P
ATOM 3 OP1 G B 6 -23.467 -45.186 21.509 1.00 51.51 O
ATOM 4 OP2 G B 6 -23.451 -42.617 21.471 1.00 51.06 O
ATOM 5 O5' G B 6 -21.855 -43.895 20.069 1.00 50.78 O
ATOM 6 C5' G B 6 -21.374 -45.027 19.347 1.00 49.50 C
ATOM 7 C4' G B 6 -20.135 -44.666 18.555 1.00 48.28 C
ATOM 8 O4' G B 6 -20.431 -43.603 17.621 1.00 48.45 O
ATOM 9 C3' G B 6 -19.000 -44.087 19.375 1.00 47.64 C
ATOM 10 O3' G B 6 -18.287 -45.121 20.020 1.00 47.16 O
ATOM 11 C2' G B 6 -18.177 -43.414 18.286 1.00 47.54 C
ATOM 12 O2' G B 6 -17.428 -44.329 17.517 1.00 47.52 O
ATOM 13 C1' G B 6 -19.280 -42.798 17.437 1.00 48.42 C
ATOM 14 N9 G B 6 -19.554 -41.422 17.844 1.00 49.02 N
ATOM 15 C8 G B 6 -20.603 -40.973 18.610 1.00 49.79 C
ATOM 16 N7 G B 6 -20.580 -39.687 18.822 1.00 50.25 N
ATOM 17 C5 G B 6 -19.438 -39.255 18.160 1.00 49.34 C
ATOM 18 C6 G B 6 -18.893 -37.955 18.039 1.00 49.45 C
ATOM 19 O6 G B 6 -19.333 -36.898 18.510 1.00 49.99 O
ATOM 20 N1 G B 6 -17.724 -37.944 17.279 1.00 49.34 N
ATOM 21 C2 G B 6 -17.151 -39.061 16.712 1.00 49.11 C
ATOM 22 N2 G B 6 -16.022 -38.868 16.013 1.00 48.44 N
ATOM 23 N3 G B 6 -17.657 -40.285 16.821 1.00 48.86 N
ATOM 24 C4 G B 6 -18.796 -40.310 17.554 1.00 48.79 C
ATOM 25 P G B 7 -17.683 -44.903 21.484 1.00 46.48 P
ATOM 26 OP1 G B 7 -16.866 -46.107 21.772 1.00 46.52 O
ATOM 27 OP2 G B 7 -18.777 -44.531 22.413 1.00 45.98 O
ATOM 28 O5' G B 7 -16.733 -43.626 21.304 1.00 45.74 O
TER
ATOM 2 P A A 62 -17.740 -46.015 5.877 1.00 67.50 P
ATOM 3 OP1 A A 62 -17.382 -46.273 4.463 1.00 69.28 O
ATOM 4 OP2 A A 62 -17.651 -47.102 6.882 1.00 66.78 O
ATOM 5 O5' A A 62 -16.849 -44.804 6.398 1.00 65.29 O
ATOM 6 C5' A A 62 -17.017 -43.510 5.839 1.00 63.88 C
ATOM 7 C4' A A 62 -16.838 -42.476 6.929 1.00 61.13 C
ATOM 8 O4' A A 62 -17.929 -42.570 7.875 1.00 60.32 O
ATOM 9 C3' A A 62 -15.632 -42.693 7.822 1.00 59.07 C
ATOM 10 O3' A A 62 -14.439 -42.313 7.170 1.00 58.06 O
ATOM 11 C2' A A 62 -15.998 -41.797 8.995 1.00 58.03 C
ATOM 12 O2' A A 62 -15.856 -40.420 8.706 1.00 58.35 O
ATOM 13 C1' A A 62 -17.475 -42.136 9.145 1.00 58.28 C
ATOM 14 N9 A A 62 -17.752 -43.161 10.149 1.00 57.23 N
ATOM 15 C8 A A 62 -17.875 -44.509 9.955 1.00 57.60 C
ATOM 16 N7 A A 62 -18.127 -45.182 11.052 1.00 56.90 N
ATOM 17 C5 A A 62 -18.172 -44.207 12.032 1.00 55.68 C
ATOM 18 C6 A A 62 -18.402 -44.266 13.421 1.00 54.76 C
ATOM 19 N6 A A 62 -18.634 -45.406 14.078 1.00 54.65 N
ATOM 20 N1 A A 62 -18.382 -43.103 14.109 1.00 54.38 N
ATOM 21 C2 A A 62 -18.146 -41.956 13.455 1.00 54.43 C
ATOM 22 N3 A A 62 -17.918 -41.779 12.154 1.00 55.07 N
ATOM 23 C4 A A 62 -17.945 -42.953 11.494 1.00 55.87 C
ATOM 24 P A A 63 -13.076 -43.054 7.565 1.00 56.89 P
ATOM 25 OP1 A A 63 -12.099 -42.813 6.479 1.00 57.36 O
ATOM 26 OP2 A A 63 -13.377 -44.444 7.986 1.00 56.15 O
ATOM 27 O5' A A 63 -12.643 -42.225 8.864 1.00 55.52 O
TER
ATOM 1 O3' U B 5 -24.299 -43.956 19.529 1.00 51.60 O
ATOM 2 P G B 6 -23.296 -43.913 20.770 1.00 51.47 P
ATOM 3 OP1 G B 6 -23.467 -45.186 21.509 1.00 51.51 O
ATOM 4 OP2 G B 6 -23.451 -42.617 21.471 1.00 51.06 O
ATOM 5 O5' G B 6 -21.855 -43.895 20.069 1.00 50.78 O
ATOM 6 C5' G B 6 -21.374 -45.027 19.347 1.00 49.50 C
ATOM 7 C4' G B 6 -20.135 -44.666 18.555 1.00 48.28 C
ATOM 8 O4' G B 6 -20.431 -43.603 17.621 1.00 48.45 O
ATOM 9 C3' G B 6 -19.000 -44.087 19.375 1.00 47.64 C
ATOM 10 O3' G B 6 -18.287 -45.121 20.020 1.00 47.16 O
ATOM 11 C2' G B 6 -18.177 -43.414 18.286 1.00 47.54 C
ATOM 12 O2' G B 6 -17.428 -44.329 17.517 1.00 47.52 O
ATOM 13 C1' G B 6 -19.280 -42.798 17.437 1.00 48.42 C
ATOM 14 N9 G B 6 -19.554 -41.422 17.844 1.00 49.02 N
ATOM 15 C8 G B 6 -20.603 -40.973 18.610 1.00 49.79 C
ATOM 16 N7 G B 6 -20.580 -39.687 18.822 1.00 50.25 N
ATOM 17 C5 G B 6 -19.438 -39.255 18.160 1.00 49.34 C
ATOM 18 C6 G B 6 -18.893 -37.955 18.039 1.00 49.45 C
ATOM 19 O6 G B 6 -19.333 -36.898 18.510 1.00 49.99 O
ATOM 20 N1 G B 6 -17.724 -37.944 17.279 1.00 49.34 N
ATOM 21 C2 G B 6 -17.151 -39.061 16.712 1.00 49.11 C
ATOM 22 N2 G B 6 -16.022 -38.868 16.013 1.00 48.44 N
ATOM 23 N3 G B 6 -17.657 -40.285 16.821 1.00 48.86 N
ATOM 24 C4 G B 6 -18.796 -40.310 17.554 1.00 48.79 C
ATOM 25 P G B 7 -17.683 -44.903 21.484 1.00 46.48 P
ATOM 26 OP1 G B 7 -16.866 -46.107 21.772 1.00 46.52 O
ATOM 27 OP2 G B 7 -18.777 -44.531 22.413 1.00 45.98 O
ATOM 28 O5' G B 7 -16.733 -43.626 21.304 1.00 45.74 O
TER
Atoms:
OP1: (-17.382,-46.273,4.463)
OP2: (-17.651,-47.102,6.882)
C3': (-15.632,-42.693,7.822)
C1': (-17.475,-42.136,9.145)
C5': (-17.017,-43.510,5.839)
O4': (-17.929,-42.570,7.875)
C8: (-17.875,-44.509,9.955)
O2': (-15.856,-40.420,8.706)
C6: (-18.402,-44.266,13.421)
C5: (-18.172,-44.207,12.032)
C4: (-17.945,-42.953,11.494)
P: (-17.740,-46.015,5.877)
C4': (-16.838,-42.476,6.929)
C2': (-15.998,-41.797,8.995)
C2: (-18.146,-41.956,13.455)
N1: (-18.382,-43.103,14.109)
N3: (-17.918,-41.779,12.154)
N6: (-18.634,-45.406,14.078)
N7: (-18.127,-45.182,11.052)
N9: (-17.752,-43.161,10.149)
O5': (-16.849,-44.804,6.398)
O3': (-14.439,-42.313,7.170)
OP2: (-17.651,-47.102,6.882)
C3': (-15.632,-42.693,7.822)
C1': (-17.475,-42.136,9.145)
C5': (-17.017,-43.510,5.839)
O4': (-17.929,-42.570,7.875)
C8: (-17.875,-44.509,9.955)
O2': (-15.856,-40.420,8.706)
C6: (-18.402,-44.266,13.421)
C5: (-18.172,-44.207,12.032)
C4: (-17.945,-42.953,11.494)
P: (-17.740,-46.015,5.877)
C4': (-16.838,-42.476,6.929)
C2': (-15.998,-41.797,8.995)
C2: (-18.146,-41.956,13.455)
N1: (-18.382,-43.103,14.109)
N3: (-17.918,-41.779,12.154)
N6: (-18.634,-45.406,14.078)
N7: (-18.127,-45.182,11.052)
N9: (-17.752,-43.161,10.149)
O5': (-16.849,-44.804,6.398)
O3': (-14.439,-42.313,7.170)
OP1: (-23.467,-45.186,21.509)
OP2: (-23.451,-42.617,21.471)
C3': (-19.000,-44.087,19.375)
C1': (-19.280,-42.798,17.437)
C5': (-21.374,-45.027,19.347)
O6: (-19.333,-36.898,18.510)
O4': (-20.431,-43.603,17.621)
C8: (-20.603,-40.973,18.610)
C2: (-17.151,-39.061,16.712)
C6: (-18.893,-37.955,18.039)
C5: (-19.438,-39.255,18.160)
C4: (-18.796,-40.310,17.554)
P: (-23.296,-43.913,20.770)
C4': (-20.135,-44.666,18.555)
C2': (-18.177,-43.414,18.286)
O2': (-17.428,-44.329,17.517)
N1: (-17.724,-37.944,17.279)
N2: (-16.022,-38.868,16.013)
N3: (-17.657,-40.285,16.821)
N7: (-20.580,-39.687,18.822)
N9: (-19.554,-41.422,17.844)
O5': (-21.855,-43.895,20.069)
O3': (-18.287,-45.121,20.020)
OP2: (-23.451,-42.617,21.471)
C3': (-19.000,-44.087,19.375)
C1': (-19.280,-42.798,17.437)
C5': (-21.374,-45.027,19.347)
O6: (-19.333,-36.898,18.510)
O4': (-20.431,-43.603,17.621)
C8: (-20.603,-40.973,18.610)
C2: (-17.151,-39.061,16.712)
C6: (-18.893,-37.955,18.039)
C5: (-19.438,-39.255,18.160)
C4: (-18.796,-40.310,17.554)
P: (-23.296,-43.913,20.770)
C4': (-20.135,-44.666,18.555)
C2': (-18.177,-43.414,18.286)
O2': (-17.428,-44.329,17.517)
N1: (-17.724,-37.944,17.279)
N2: (-16.022,-38.868,16.013)
N3: (-17.657,-40.285,16.821)
N7: (-20.580,-39.687,18.822)
N9: (-19.554,-41.422,17.844)
O5': (-21.855,-43.895,20.069)
O3': (-18.287,-45.121,20.020)
Image (generated by PyMOL):