Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A6:B62
Extra
PDB:
ATOM 1 O3' U A 5 9.378 -24.779 7.672 1.00 62.96 O
ATOM 2 P G A 6 9.951 -26.035 8.482 1.00 61.76 P
ATOM 3 OP1 G A 6 11.164 -25.586 9.203 1.00 61.98 O
ATOM 4 OP2 G A 6 10.021 -27.207 7.576 1.00 60.90 O
ATOM 5 O5' G A 6 8.786 -26.309 9.542 1.00 61.07 O
ATOM 6 C5' G A 6 8.379 -25.280 10.440 1.00 61.26 C
ATOM 7 C4' G A 6 7.000 -25.563 11.008 1.00 60.70 C
ATOM 8 O4' G A 6 6.004 -25.498 9.953 1.00 61.34 O
ATOM 9 C3' G A 6 6.784 -26.957 11.580 1.00 59.17 C
ATOM 10 O3' G A 6 7.365 -27.111 12.864 1.00 58.04 O
ATOM 11 C2' G A 6 5.261 -27.004 11.614 1.00 59.26 C
ATOM 12 O2' G A 6 4.700 -26.215 12.645 1.00 59.43 O
ATOM 13 C1' G A 6 4.957 -26.415 10.237 1.00 60.19 C
ATOM 14 N9 G A 6 4.890 -27.452 9.204 1.00 59.59 N
ATOM 15 C8 G A 6 5.838 -27.767 8.258 1.00 59.60 C
ATOM 16 N7 G A 6 5.492 -28.755 7.480 1.00 59.48 N
ATOM 17 C5 G A 6 4.234 -29.127 7.940 1.00 58.94 C
ATOM 18 C6 G A 6 3.351 -30.143 7.491 1.00 58.61 C
ATOM 19 O6 G A 6 3.509 -30.948 6.563 1.00 58.64 O
ATOM 20 N1 G A 6 2.172 -30.180 8.238 1.00 58.36 N
ATOM 21 C2 G A 6 1.880 -29.341 9.289 1.00 57.95 C
ATOM 22 N2 G A 6 0.698 -29.521 9.893 1.00 57.02 N
ATOM 23 N3 G A 6 2.697 -28.386 9.715 1.00 58.47 N
ATOM 24 C4 G A 6 3.851 -28.335 9.000 1.00 58.92 C
ATOM 25 P G A 7 8.132 -28.475 13.202 1.00 56.92 P
ATOM 26 OP1 G A 7 8.594 -28.378 14.603 1.00 57.21 O
ATOM 27 OP2 G A 7 9.117 -28.752 12.132 1.00 56.81 O
ATOM 28 O5' G A 7 6.979 -29.581 13.079 1.00 55.77 O
TER
ATOM 1 O3' G B 61 -2.939 -17.793 10.386 1.00 70.82 O
ATOM 2 P A B 62 -3.709 -17.950 11.779 1.00 68.58 P
ATOM 3 OP1 A B 62 -4.891 -17.056 11.769 1.00 69.05 O
ATOM 4 OP2 A B 62 -2.721 -17.863 12.879 1.00 68.10 O
ATOM 5 O5' A B 62 -4.205 -19.460 11.692 1.00 66.69 O
ATOM 6 C5' A B 62 -4.899 -19.910 10.540 1.00 64.71 C
ATOM 7 C4' A B 62 -4.451 -21.320 10.222 1.00 62.57 C
ATOM 8 O4' A B 62 -3.117 -21.305 9.660 1.00 61.98 O
ATOM 9 C3' A B 62 -4.261 -22.221 11.427 1.00 61.02 C
ATOM 10 O3' A B 62 -5.507 -22.641 11.949 1.00 59.95 O
ATOM 11 C2' A B 62 -3.485 -23.354 10.774 1.00 60.42 C
ATOM 12 O2' A B 62 -4.306 -24.181 9.972 1.00 60.51 O
ATOM 13 C1' A B 62 -2.514 -22.563 9.902 1.00 60.40 C
ATOM 14 N9 A B 62 -1.201 -22.376 10.516 1.00 59.50 N
ATOM 15 C8 A B 62 -0.765 -21.313 11.260 1.00 59.65 C
ATOM 16 N7 A B 62 0.472 -21.429 11.685 1.00 58.93 N
ATOM 17 C5 A B 62 0.874 -22.656 11.186 1.00 58.35 C
ATOM 18 C6 A B 62 2.088 -23.371 11.276 1.00 57.93 C
ATOM 19 N6 A B 62 3.161 -22.922 11.937 1.00 57.93 N
ATOM 20 N1 A B 62 2.160 -24.573 10.659 1.00 57.57 N
ATOM 21 C2 A B 62 1.086 -25.026 9.995 1.00 57.77 C
ATOM 22 N3 A B 62 -0.105 -24.444 9.841 1.00 57.99 N
ATOM 23 C4 A B 62 -0.144 -23.253 10.464 1.00 58.47 C
ATOM 24 P A B 63 -5.645 -23.008 13.499 1.00 58.11 P
ATOM 25 OP1 A B 63 -7.093 -22.997 13.814 1.00 58.27 O
ATOM 26 OP2 A B 63 -4.729 -22.151 14.286 1.00 58.01 O
ATOM 27 O5' A B 63 -5.075 -24.504 13.537 1.00 56.54 O
TER
ATOM 2 P G A 6 9.951 -26.035 8.482 1.00 61.76 P
ATOM 3 OP1 G A 6 11.164 -25.586 9.203 1.00 61.98 O
ATOM 4 OP2 G A 6 10.021 -27.207 7.576 1.00 60.90 O
ATOM 5 O5' G A 6 8.786 -26.309 9.542 1.00 61.07 O
ATOM 6 C5' G A 6 8.379 -25.280 10.440 1.00 61.26 C
ATOM 7 C4' G A 6 7.000 -25.563 11.008 1.00 60.70 C
ATOM 8 O4' G A 6 6.004 -25.498 9.953 1.00 61.34 O
ATOM 9 C3' G A 6 6.784 -26.957 11.580 1.00 59.17 C
ATOM 10 O3' G A 6 7.365 -27.111 12.864 1.00 58.04 O
ATOM 11 C2' G A 6 5.261 -27.004 11.614 1.00 59.26 C
ATOM 12 O2' G A 6 4.700 -26.215 12.645 1.00 59.43 O
ATOM 13 C1' G A 6 4.957 -26.415 10.237 1.00 60.19 C
ATOM 14 N9 G A 6 4.890 -27.452 9.204 1.00 59.59 N
ATOM 15 C8 G A 6 5.838 -27.767 8.258 1.00 59.60 C
ATOM 16 N7 G A 6 5.492 -28.755 7.480 1.00 59.48 N
ATOM 17 C5 G A 6 4.234 -29.127 7.940 1.00 58.94 C
ATOM 18 C6 G A 6 3.351 -30.143 7.491 1.00 58.61 C
ATOM 19 O6 G A 6 3.509 -30.948 6.563 1.00 58.64 O
ATOM 20 N1 G A 6 2.172 -30.180 8.238 1.00 58.36 N
ATOM 21 C2 G A 6 1.880 -29.341 9.289 1.00 57.95 C
ATOM 22 N2 G A 6 0.698 -29.521 9.893 1.00 57.02 N
ATOM 23 N3 G A 6 2.697 -28.386 9.715 1.00 58.47 N
ATOM 24 C4 G A 6 3.851 -28.335 9.000 1.00 58.92 C
ATOM 25 P G A 7 8.132 -28.475 13.202 1.00 56.92 P
ATOM 26 OP1 G A 7 8.594 -28.378 14.603 1.00 57.21 O
ATOM 27 OP2 G A 7 9.117 -28.752 12.132 1.00 56.81 O
ATOM 28 O5' G A 7 6.979 -29.581 13.079 1.00 55.77 O
TER
ATOM 1 O3' G B 61 -2.939 -17.793 10.386 1.00 70.82 O
ATOM 2 P A B 62 -3.709 -17.950 11.779 1.00 68.58 P
ATOM 3 OP1 A B 62 -4.891 -17.056 11.769 1.00 69.05 O
ATOM 4 OP2 A B 62 -2.721 -17.863 12.879 1.00 68.10 O
ATOM 5 O5' A B 62 -4.205 -19.460 11.692 1.00 66.69 O
ATOM 6 C5' A B 62 -4.899 -19.910 10.540 1.00 64.71 C
ATOM 7 C4' A B 62 -4.451 -21.320 10.222 1.00 62.57 C
ATOM 8 O4' A B 62 -3.117 -21.305 9.660 1.00 61.98 O
ATOM 9 C3' A B 62 -4.261 -22.221 11.427 1.00 61.02 C
ATOM 10 O3' A B 62 -5.507 -22.641 11.949 1.00 59.95 O
ATOM 11 C2' A B 62 -3.485 -23.354 10.774 1.00 60.42 C
ATOM 12 O2' A B 62 -4.306 -24.181 9.972 1.00 60.51 O
ATOM 13 C1' A B 62 -2.514 -22.563 9.902 1.00 60.40 C
ATOM 14 N9 A B 62 -1.201 -22.376 10.516 1.00 59.50 N
ATOM 15 C8 A B 62 -0.765 -21.313 11.260 1.00 59.65 C
ATOM 16 N7 A B 62 0.472 -21.429 11.685 1.00 58.93 N
ATOM 17 C5 A B 62 0.874 -22.656 11.186 1.00 58.35 C
ATOM 18 C6 A B 62 2.088 -23.371 11.276 1.00 57.93 C
ATOM 19 N6 A B 62 3.161 -22.922 11.937 1.00 57.93 N
ATOM 20 N1 A B 62 2.160 -24.573 10.659 1.00 57.57 N
ATOM 21 C2 A B 62 1.086 -25.026 9.995 1.00 57.77 C
ATOM 22 N3 A B 62 -0.105 -24.444 9.841 1.00 57.99 N
ATOM 23 C4 A B 62 -0.144 -23.253 10.464 1.00 58.47 C
ATOM 24 P A B 63 -5.645 -23.008 13.499 1.00 58.11 P
ATOM 25 OP1 A B 63 -7.093 -22.997 13.814 1.00 58.27 O
ATOM 26 OP2 A B 63 -4.729 -22.151 14.286 1.00 58.01 O
ATOM 27 O5' A B 63 -5.075 -24.504 13.537 1.00 56.54 O
TER
Atoms:
OP1: (11.164,-25.586,9.203)
OP2: (10.021,-27.207,7.576)
C3': (6.784,-26.957,11.580)
C1': (4.957,-26.415,10.237)
C5': (8.379,-25.280,10.440)
O6: (3.509,-30.948,6.563)
O4': (6.004,-25.498,9.953)
C8: (5.838,-27.767,8.258)
C2: (1.880,-29.341,9.289)
C6: (3.351,-30.143,7.491)
C5: (4.234,-29.127,7.940)
C4: (3.851,-28.335,9.000)
P: (9.951,-26.035,8.482)
C4': (7.000,-25.563,11.008)
C2': (5.261,-27.004,11.614)
O2': (4.700,-26.215,12.645)
N1: (2.172,-30.180,8.238)
N2: (0.698,-29.521,9.893)
N3: (2.697,-28.386,9.715)
N7: (5.492,-28.755,7.480)
N9: (4.890,-27.452,9.204)
O5': (8.786,-26.309,9.542)
O3': (7.365,-27.111,12.864)
OP2: (10.021,-27.207,7.576)
C3': (6.784,-26.957,11.580)
C1': (4.957,-26.415,10.237)
C5': (8.379,-25.280,10.440)
O6: (3.509,-30.948,6.563)
O4': (6.004,-25.498,9.953)
C8: (5.838,-27.767,8.258)
C2: (1.880,-29.341,9.289)
C6: (3.351,-30.143,7.491)
C5: (4.234,-29.127,7.940)
C4: (3.851,-28.335,9.000)
P: (9.951,-26.035,8.482)
C4': (7.000,-25.563,11.008)
C2': (5.261,-27.004,11.614)
O2': (4.700,-26.215,12.645)
N1: (2.172,-30.180,8.238)
N2: (0.698,-29.521,9.893)
N3: (2.697,-28.386,9.715)
N7: (5.492,-28.755,7.480)
N9: (4.890,-27.452,9.204)
O5': (8.786,-26.309,9.542)
O3': (7.365,-27.111,12.864)
OP1: (-4.891,-17.056,11.769)
OP2: (-2.721,-17.863,12.879)
C3': (-4.261,-22.221,11.427)
C1': (-2.514,-22.563,9.902)
C5': (-4.899,-19.910,10.540)
O4': (-3.117,-21.305,9.660)
C8: (-0.765,-21.313,11.260)
O2': (-4.306,-24.181,9.972)
C6: (2.088,-23.371,11.276)
C5: (0.874,-22.656,11.186)
C4: (-0.144,-23.253,10.464)
P: (-3.709,-17.950,11.779)
C4': (-4.451,-21.320,10.222)
C2': (-3.485,-23.354,10.774)
C2: (1.086,-25.026,9.995)
N1: (2.160,-24.573,10.659)
N3: (-0.105,-24.444,9.841)
N6: (3.161,-22.922,11.937)
N7: (0.472,-21.429,11.685)
N9: (-1.201,-22.376,10.516)
O5': (-4.205,-19.460,11.692)
O3': (-5.507,-22.641,11.949)
OP2: (-2.721,-17.863,12.879)
C3': (-4.261,-22.221,11.427)
C1': (-2.514,-22.563,9.902)
C5': (-4.899,-19.910,10.540)
O4': (-3.117,-21.305,9.660)
C8: (-0.765,-21.313,11.260)
O2': (-4.306,-24.181,9.972)
C6: (2.088,-23.371,11.276)
C5: (0.874,-22.656,11.186)
C4: (-0.144,-23.253,10.464)
P: (-3.709,-17.950,11.779)
C4': (-4.451,-21.320,10.222)
C2': (-3.485,-23.354,10.774)
C2: (1.086,-25.026,9.995)
N1: (2.160,-24.573,10.659)
N3: (-0.105,-24.444,9.841)
N6: (3.161,-22.922,11.937)
N7: (0.472,-21.429,11.685)
N9: (-1.201,-22.376,10.516)
O5': (-4.205,-19.460,11.692)
O3': (-5.507,-22.641,11.949)
Image (generated by PyMOL):