Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1897:A1920
Extra
PDB:
ATOM 1 O3' G A1896 -82.405 -18.042 14.682 1.00 1.59 O
ATOM 2 P G A1897 -82.389 -18.034 13.095 1.00 15.24 P
ATOM 3 OP1 G A1897 -82.621 -19.429 12.662 1.00 15.24 O
ATOM 4 OP2 G A1897 -81.167 -17.351 12.660 1.00 15.24 O
ATOM 5 O5' G A1897 -83.649 -17.153 12.758 1.00 15.24 O
ATOM 6 C5' G A1897 -84.894 -17.439 13.376 1.00 15.24 C
ATOM 7 C4' G A1897 -85.865 -16.304 13.217 1.00 15.24 C
ATOM 8 O4' G A1897 -85.530 -15.238 14.129 1.00 15.24 O
ATOM 9 C3' G A1897 -85.875 -15.627 11.865 1.00 15.24 C
ATOM 10 O3' G A1897 -86.607 -16.337 10.904 1.00 15.24 O
ATOM 11 C2' G A1897 -86.494 -14.317 12.206 1.00 15.24 C
ATOM 12 O2' G A1897 -87.866 -14.517 12.497 1.00 15.24 O
ATOM 13 C1' G A1897 -85.780 -14.009 13.510 1.00 15.24 C
ATOM 14 N9 G A1897 -84.486 -13.322 13.298 1.00 15.28 N
ATOM 15 C8 G A1897 -83.250 -13.814 13.634 1.00 15.28 C
ATOM 16 N7 G A1897 -82.284 -12.988 13.375 1.00 15.28 N
ATOM 17 C5 G A1897 -82.914 -11.868 12.848 1.00 15.28 C
ATOM 18 C6 G A1897 -82.387 -10.645 12.367 1.00 15.28 C
ATOM 19 O6 G A1897 -81.236 -10.247 12.291 1.00 15.28 O
ATOM 20 N1 G A1897 -83.336 -9.785 11.915 1.00 15.28 N
ATOM 21 C2 G A1897 -84.656 -10.056 11.921 1.00 15.28 C
ATOM 22 N2 G A1897 -85.404 -9.057 11.424 1.00 15.28 N
ATOM 23 N3 G A1897 -85.190 -11.187 12.357 1.00 15.28 N
ATOM 24 C4 G A1897 -84.264 -12.051 12.805 1.00 15.28 C
ATOM 25 P C A1898 -86.064 -16.416 9.417 1.00 12.32 P
ATOM 26 OP1 C A1898 -86.932 -17.354 8.669 1.00 12.32 O
ATOM 27 OP2 C A1898 -84.602 -16.700 9.498 1.00 12.32 O
ATOM 28 O5' C A1898 -86.301 -14.940 8.906 1.00 12.32 O
TER
ATOM 1 O3' U B1919 -94.819 -11.311 18.740 1.00 85.68 O
ATOM 2 P A B1920 -95.141 -9.786 19.091 1.00 19.33 P
ATOM 3 OP1 A B1920 -95.899 -9.774 20.377 1.00 19.33 O
ATOM 4 OP2 A B1920 -95.773 -9.191 17.876 1.00 19.33 O
ATOM 5 O5' A B1920 -93.693 -9.170 19.308 1.00 19.33 O
ATOM 6 C5' A B1920 -93.509 -7.767 19.417 1.00 19.33 C
ATOM 7 C4' A B1920 -92.318 -7.312 18.620 1.00 19.33 C
ATOM 8 O4' A B1920 -91.248 -8.274 18.768 1.00 19.33 O
ATOM 9 C3' A B1920 -92.521 -7.196 17.122 1.00 19.33 C
ATOM 10 O3' A B1920 -93.137 -5.964 16.763 1.00 19.33 O
ATOM 11 C2' A B1920 -91.098 -7.357 16.582 1.00 19.33 C
ATOM 12 O2' A B1920 -90.394 -6.117 16.619 1.00 19.33 O
ATOM 13 C1' A B1920 -90.463 -8.312 17.610 1.00 19.33 C
ATOM 14 N9 A B1920 -90.405 -9.708 17.148 1.00 19.12 N
ATOM 15 C8 A B1920 -91.333 -10.642 17.464 1.00 19.12 C
ATOM 16 N7 A B1920 -91.085 -11.821 16.962 1.00 19.12 N
ATOM 17 C5 A B1920 -89.894 -11.662 16.285 1.00 19.12 C
ATOM 18 C6 A B1920 -89.130 -12.574 15.525 1.00 19.12 C
ATOM 19 N6 A B1920 -89.457 -13.857 15.347 1.00 19.12 N
ATOM 20 N1 A B1920 -87.998 -12.114 14.969 1.00 19.12 N
ATOM 21 C2 A B1920 -87.703 -10.818 15.182 1.00 19.12 C
ATOM 22 N3 A B1920 -88.356 -9.870 15.872 1.00 19.12 N
ATOM 23 C4 A B1920 -89.460 -10.362 16.411 1.00 19.12 C
ATOM 24 P A B1921 -93.897 -5.791 15.356 1.00 6.80 P
ATOM 25 OP1 A B1921 -94.452 -4.431 15.324 1.00 6.80 O
ATOM 26 OP2 A B1921 -94.823 -6.930 15.209 1.00 6.80 O
ATOM 27 O5' A B1921 -92.714 -5.913 14.296 1.00 6.80 O
TER
ATOM 2 P G A1897 -82.389 -18.034 13.095 1.00 15.24 P
ATOM 3 OP1 G A1897 -82.621 -19.429 12.662 1.00 15.24 O
ATOM 4 OP2 G A1897 -81.167 -17.351 12.660 1.00 15.24 O
ATOM 5 O5' G A1897 -83.649 -17.153 12.758 1.00 15.24 O
ATOM 6 C5' G A1897 -84.894 -17.439 13.376 1.00 15.24 C
ATOM 7 C4' G A1897 -85.865 -16.304 13.217 1.00 15.24 C
ATOM 8 O4' G A1897 -85.530 -15.238 14.129 1.00 15.24 O
ATOM 9 C3' G A1897 -85.875 -15.627 11.865 1.00 15.24 C
ATOM 10 O3' G A1897 -86.607 -16.337 10.904 1.00 15.24 O
ATOM 11 C2' G A1897 -86.494 -14.317 12.206 1.00 15.24 C
ATOM 12 O2' G A1897 -87.866 -14.517 12.497 1.00 15.24 O
ATOM 13 C1' G A1897 -85.780 -14.009 13.510 1.00 15.24 C
ATOM 14 N9 G A1897 -84.486 -13.322 13.298 1.00 15.28 N
ATOM 15 C8 G A1897 -83.250 -13.814 13.634 1.00 15.28 C
ATOM 16 N7 G A1897 -82.284 -12.988 13.375 1.00 15.28 N
ATOM 17 C5 G A1897 -82.914 -11.868 12.848 1.00 15.28 C
ATOM 18 C6 G A1897 -82.387 -10.645 12.367 1.00 15.28 C
ATOM 19 O6 G A1897 -81.236 -10.247 12.291 1.00 15.28 O
ATOM 20 N1 G A1897 -83.336 -9.785 11.915 1.00 15.28 N
ATOM 21 C2 G A1897 -84.656 -10.056 11.921 1.00 15.28 C
ATOM 22 N2 G A1897 -85.404 -9.057 11.424 1.00 15.28 N
ATOM 23 N3 G A1897 -85.190 -11.187 12.357 1.00 15.28 N
ATOM 24 C4 G A1897 -84.264 -12.051 12.805 1.00 15.28 C
ATOM 25 P C A1898 -86.064 -16.416 9.417 1.00 12.32 P
ATOM 26 OP1 C A1898 -86.932 -17.354 8.669 1.00 12.32 O
ATOM 27 OP2 C A1898 -84.602 -16.700 9.498 1.00 12.32 O
ATOM 28 O5' C A1898 -86.301 -14.940 8.906 1.00 12.32 O
TER
ATOM 1 O3' U B1919 -94.819 -11.311 18.740 1.00 85.68 O
ATOM 2 P A B1920 -95.141 -9.786 19.091 1.00 19.33 P
ATOM 3 OP1 A B1920 -95.899 -9.774 20.377 1.00 19.33 O
ATOM 4 OP2 A B1920 -95.773 -9.191 17.876 1.00 19.33 O
ATOM 5 O5' A B1920 -93.693 -9.170 19.308 1.00 19.33 O
ATOM 6 C5' A B1920 -93.509 -7.767 19.417 1.00 19.33 C
ATOM 7 C4' A B1920 -92.318 -7.312 18.620 1.00 19.33 C
ATOM 8 O4' A B1920 -91.248 -8.274 18.768 1.00 19.33 O
ATOM 9 C3' A B1920 -92.521 -7.196 17.122 1.00 19.33 C
ATOM 10 O3' A B1920 -93.137 -5.964 16.763 1.00 19.33 O
ATOM 11 C2' A B1920 -91.098 -7.357 16.582 1.00 19.33 C
ATOM 12 O2' A B1920 -90.394 -6.117 16.619 1.00 19.33 O
ATOM 13 C1' A B1920 -90.463 -8.312 17.610 1.00 19.33 C
ATOM 14 N9 A B1920 -90.405 -9.708 17.148 1.00 19.12 N
ATOM 15 C8 A B1920 -91.333 -10.642 17.464 1.00 19.12 C
ATOM 16 N7 A B1920 -91.085 -11.821 16.962 1.00 19.12 N
ATOM 17 C5 A B1920 -89.894 -11.662 16.285 1.00 19.12 C
ATOM 18 C6 A B1920 -89.130 -12.574 15.525 1.00 19.12 C
ATOM 19 N6 A B1920 -89.457 -13.857 15.347 1.00 19.12 N
ATOM 20 N1 A B1920 -87.998 -12.114 14.969 1.00 19.12 N
ATOM 21 C2 A B1920 -87.703 -10.818 15.182 1.00 19.12 C
ATOM 22 N3 A B1920 -88.356 -9.870 15.872 1.00 19.12 N
ATOM 23 C4 A B1920 -89.460 -10.362 16.411 1.00 19.12 C
ATOM 24 P A B1921 -93.897 -5.791 15.356 1.00 6.80 P
ATOM 25 OP1 A B1921 -94.452 -4.431 15.324 1.00 6.80 O
ATOM 26 OP2 A B1921 -94.823 -6.930 15.209 1.00 6.80 O
ATOM 27 O5' A B1921 -92.714 -5.913 14.296 1.00 6.80 O
TER
Atoms:
OP1: (-82.621,-19.429,12.662)
OP2: (-81.167,-17.351,12.660)
C3': (-85.875,-15.627,11.865)
C1': (-85.780,-14.009,13.510)
C5': (-84.894,-17.439,13.376)
O6: (-81.236,-10.247,12.291)
O4': (-85.530,-15.238,14.129)
C8: (-83.250,-13.814,13.634)
C2: (-84.656,-10.056,11.921)
C6: (-82.387,-10.645,12.367)
C5: (-82.914,-11.868,12.848)
C4: (-84.264,-12.051,12.805)
P: (-82.389,-18.034,13.095)
C4': (-85.865,-16.304,13.217)
C2': (-86.494,-14.317,12.206)
O2': (-87.866,-14.517,12.497)
N1: (-83.336,-9.785,11.915)
N2: (-85.404,-9.057,11.424)
N3: (-85.190,-11.187,12.357)
N7: (-82.284,-12.988,13.375)
N9: (-84.486,-13.322,13.298)
O5': (-83.649,-17.153,12.758)
O3': (-86.607,-16.337,10.904)
OP2: (-81.167,-17.351,12.660)
C3': (-85.875,-15.627,11.865)
C1': (-85.780,-14.009,13.510)
C5': (-84.894,-17.439,13.376)
O6: (-81.236,-10.247,12.291)
O4': (-85.530,-15.238,14.129)
C8: (-83.250,-13.814,13.634)
C2: (-84.656,-10.056,11.921)
C6: (-82.387,-10.645,12.367)
C5: (-82.914,-11.868,12.848)
C4: (-84.264,-12.051,12.805)
P: (-82.389,-18.034,13.095)
C4': (-85.865,-16.304,13.217)
C2': (-86.494,-14.317,12.206)
O2': (-87.866,-14.517,12.497)
N1: (-83.336,-9.785,11.915)
N2: (-85.404,-9.057,11.424)
N3: (-85.190,-11.187,12.357)
N7: (-82.284,-12.988,13.375)
N9: (-84.486,-13.322,13.298)
O5': (-83.649,-17.153,12.758)
O3': (-86.607,-16.337,10.904)
OP1: (-95.899,-9.774,20.377)
OP2: (-95.773,-9.191,17.876)
C3': (-92.521,-7.196,17.122)
C1': (-90.463,-8.312,17.610)
C5': (-93.509,-7.767,19.417)
O4': (-91.248,-8.274,18.768)
C8: (-91.333,-10.642,17.464)
O2': (-90.394,-6.117,16.619)
C6: (-89.130,-12.574,15.525)
C5: (-89.894,-11.662,16.285)
C4: (-89.460,-10.362,16.411)
P: (-95.141,-9.786,19.091)
C4': (-92.318,-7.312,18.620)
C2': (-91.098,-7.357,16.582)
C2: (-87.703,-10.818,15.182)
N1: (-87.998,-12.114,14.969)
N3: (-88.356,-9.870,15.872)
N6: (-89.457,-13.857,15.347)
N7: (-91.085,-11.821,16.962)
N9: (-90.405,-9.708,17.148)
O5': (-93.693,-9.170,19.308)
O3': (-93.137,-5.964,16.763)
OP2: (-95.773,-9.191,17.876)
C3': (-92.521,-7.196,17.122)
C1': (-90.463,-8.312,17.610)
C5': (-93.509,-7.767,19.417)
O4': (-91.248,-8.274,18.768)
C8: (-91.333,-10.642,17.464)
O2': (-90.394,-6.117,16.619)
C6: (-89.130,-12.574,15.525)
C5: (-89.894,-11.662,16.285)
C4: (-89.460,-10.362,16.411)
P: (-95.141,-9.786,19.091)
C4': (-92.318,-7.312,18.620)
C2': (-91.098,-7.357,16.582)
C2: (-87.703,-10.818,15.182)
N1: (-87.998,-12.114,14.969)
N3: (-88.356,-9.870,15.872)
N6: (-89.457,-13.857,15.347)
N7: (-91.085,-11.821,16.962)
N9: (-90.405,-9.708,17.148)
O5': (-93.693,-9.170,19.308)
O3': (-93.137,-5.964,16.763)
Image (generated by PyMOL):