Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1362:A1802
Extra
PDB:
ATOM 1 O3' G A1361 -48.638 -37.847 48.832 1.00 0.01 O
ATOM 2 P G A1362 -47.665 -36.710 48.308 1.00 0.01 P
ATOM 3 OP1 G A1362 -47.376 -37.014 46.881 1.00 0.01 O
ATOM 4 OP2 G A1362 -46.536 -36.642 49.274 1.00 0.01 O
ATOM 5 O5' G A1362 -48.572 -35.389 48.423 1.00 0.01 O
ATOM 6 C5' G A1362 -49.626 -35.136 47.501 1.00 0.01 C
ATOM 7 C4' G A1362 -49.885 -33.658 47.326 1.00 0.01 C
ATOM 8 O4' G A1362 -50.509 -33.125 48.515 1.00 0.01 O
ATOM 9 C3' G A1362 -48.662 -32.780 47.125 1.00 0.01 C
ATOM 10 O3' G A1362 -48.248 -32.727 45.787 1.00 0.01 O
ATOM 11 C2' G A1362 -49.132 -31.437 47.640 1.00 0.01 C
ATOM 12 O2' G A1362 -49.978 -30.816 46.685 1.00 0.01 O
ATOM 13 C1' G A1362 -49.972 -31.855 48.818 1.00 0.01 C
ATOM 14 N9 G A1362 -49.178 -31.985 50.044 1.00 0.01 N
ATOM 15 C8 G A1362 -48.658 -33.158 50.481 1.00 0.01 C
ATOM 16 N7 G A1362 -48.043 -33.028 51.600 1.00 0.01 N
ATOM 17 C5 G A1362 -48.178 -31.707 51.944 1.00 0.01 C
ATOM 18 C6 G A1362 -47.711 -31.008 53.073 1.00 0.01 C
ATOM 19 O6 G A1362 -47.064 -31.386 54.044 1.00 0.01 O
ATOM 20 N1 G A1362 -48.056 -29.696 53.046 1.00 0.01 N
ATOM 21 C2 G A1362 -48.763 -29.121 52.058 1.00 0.01 C
ATOM 22 N2 G A1362 -48.963 -27.828 52.271 1.00 0.01 N
ATOM 23 N3 G A1362 -49.221 -29.739 50.983 1.00 0.01 N
ATOM 24 C4 G A1362 -48.888 -31.040 50.993 1.00 0.01 C
ATOM 25 P C A1363 -46.860 -32.029 45.407 1.00 0.01 P
ATOM 26 OP1 C A1363 -46.894 -31.765 43.943 1.00 0.01 O
ATOM 27 OP2 C A1363 -45.761 -32.861 45.986 1.00 0.01 O
ATOM 28 O5' C A1363 -46.925 -30.684 46.168 1.00 0.01 O
TER
ATOM 1 O3' A B1801 -60.624 -27.145 48.774 1.00 27.10 O
ATOM 2 P A B1802 -60.164 -25.838 48.062 1.00 9.10 P
ATOM 3 OP1 A B1802 -61.285 -24.847 48.212 1.00 9.10 O
ATOM 4 OP2 A B1802 -59.707 -26.238 46.690 1.00 9.10 O
ATOM 5 O5' A B1802 -58.908 -25.389 48.944 1.00 9.10 O
ATOM 6 C5' A B1802 -59.065 -24.607 50.125 1.00 9.10 C
ATOM 7 C4' A B1802 -58.023 -24.981 51.146 1.00 9.10 C
ATOM 8 O4' A B1802 -57.694 -26.372 50.976 1.00 9.10 O
ATOM 9 C3' A B1802 -56.690 -24.259 51.032 1.00 9.10 C
ATOM 10 O3' A B1802 -56.679 -23.061 51.757 1.00 9.10 O
ATOM 11 C2' A B1802 -55.686 -25.272 51.557 1.00 9.10 C
ATOM 12 O2' A B1802 -55.606 -25.218 52.969 1.00 9.10 O
ATOM 13 C1' A B1802 -56.326 -26.586 51.175 1.00 9.10 C
ATOM 14 N9 A B1802 -55.766 -27.162 49.952 1.00 9.31 N
ATOM 15 C8 A B1802 -56.081 -27.054 48.626 1.00 9.31 C
ATOM 16 N7 A B1802 -55.333 -27.822 47.858 1.00 9.31 N
ATOM 17 C5 A B1802 -54.521 -28.477 48.744 1.00 9.31 C
ATOM 18 C6 A B1802 -53.521 -29.415 48.612 1.00 9.31 C
ATOM 19 N6 A B1802 -53.096 -29.930 47.483 1.00 9.31 N
ATOM 20 N1 A B1802 -52.907 -29.846 49.701 1.00 9.31 N
ATOM 21 C2 A B1802 -53.293 -29.362 50.874 1.00 9.31 C
ATOM 22 N3 A B1802 -54.225 -28.468 51.152 1.00 9.31 N
ATOM 23 C4 A B1802 -54.790 -28.082 50.018 1.00 9.31 C
ATOM 24 P A B1803 -55.971 -21.760 51.154 1.00 0.01 P
ATOM 25 OP1 A B1803 -56.385 -20.626 51.992 1.00 0.01 O
ATOM 26 OP2 A B1803 -56.288 -21.720 49.706 1.00 0.01 O
ATOM 27 O5' A B1803 -54.412 -22.061 51.377 1.00 0.01 O
TER
ATOM 2 P G A1362 -47.665 -36.710 48.308 1.00 0.01 P
ATOM 3 OP1 G A1362 -47.376 -37.014 46.881 1.00 0.01 O
ATOM 4 OP2 G A1362 -46.536 -36.642 49.274 1.00 0.01 O
ATOM 5 O5' G A1362 -48.572 -35.389 48.423 1.00 0.01 O
ATOM 6 C5' G A1362 -49.626 -35.136 47.501 1.00 0.01 C
ATOM 7 C4' G A1362 -49.885 -33.658 47.326 1.00 0.01 C
ATOM 8 O4' G A1362 -50.509 -33.125 48.515 1.00 0.01 O
ATOM 9 C3' G A1362 -48.662 -32.780 47.125 1.00 0.01 C
ATOM 10 O3' G A1362 -48.248 -32.727 45.787 1.00 0.01 O
ATOM 11 C2' G A1362 -49.132 -31.437 47.640 1.00 0.01 C
ATOM 12 O2' G A1362 -49.978 -30.816 46.685 1.00 0.01 O
ATOM 13 C1' G A1362 -49.972 -31.855 48.818 1.00 0.01 C
ATOM 14 N9 G A1362 -49.178 -31.985 50.044 1.00 0.01 N
ATOM 15 C8 G A1362 -48.658 -33.158 50.481 1.00 0.01 C
ATOM 16 N7 G A1362 -48.043 -33.028 51.600 1.00 0.01 N
ATOM 17 C5 G A1362 -48.178 -31.707 51.944 1.00 0.01 C
ATOM 18 C6 G A1362 -47.711 -31.008 53.073 1.00 0.01 C
ATOM 19 O6 G A1362 -47.064 -31.386 54.044 1.00 0.01 O
ATOM 20 N1 G A1362 -48.056 -29.696 53.046 1.00 0.01 N
ATOM 21 C2 G A1362 -48.763 -29.121 52.058 1.00 0.01 C
ATOM 22 N2 G A1362 -48.963 -27.828 52.271 1.00 0.01 N
ATOM 23 N3 G A1362 -49.221 -29.739 50.983 1.00 0.01 N
ATOM 24 C4 G A1362 -48.888 -31.040 50.993 1.00 0.01 C
ATOM 25 P C A1363 -46.860 -32.029 45.407 1.00 0.01 P
ATOM 26 OP1 C A1363 -46.894 -31.765 43.943 1.00 0.01 O
ATOM 27 OP2 C A1363 -45.761 -32.861 45.986 1.00 0.01 O
ATOM 28 O5' C A1363 -46.925 -30.684 46.168 1.00 0.01 O
TER
ATOM 1 O3' A B1801 -60.624 -27.145 48.774 1.00 27.10 O
ATOM 2 P A B1802 -60.164 -25.838 48.062 1.00 9.10 P
ATOM 3 OP1 A B1802 -61.285 -24.847 48.212 1.00 9.10 O
ATOM 4 OP2 A B1802 -59.707 -26.238 46.690 1.00 9.10 O
ATOM 5 O5' A B1802 -58.908 -25.389 48.944 1.00 9.10 O
ATOM 6 C5' A B1802 -59.065 -24.607 50.125 1.00 9.10 C
ATOM 7 C4' A B1802 -58.023 -24.981 51.146 1.00 9.10 C
ATOM 8 O4' A B1802 -57.694 -26.372 50.976 1.00 9.10 O
ATOM 9 C3' A B1802 -56.690 -24.259 51.032 1.00 9.10 C
ATOM 10 O3' A B1802 -56.679 -23.061 51.757 1.00 9.10 O
ATOM 11 C2' A B1802 -55.686 -25.272 51.557 1.00 9.10 C
ATOM 12 O2' A B1802 -55.606 -25.218 52.969 1.00 9.10 O
ATOM 13 C1' A B1802 -56.326 -26.586 51.175 1.00 9.10 C
ATOM 14 N9 A B1802 -55.766 -27.162 49.952 1.00 9.31 N
ATOM 15 C8 A B1802 -56.081 -27.054 48.626 1.00 9.31 C
ATOM 16 N7 A B1802 -55.333 -27.822 47.858 1.00 9.31 N
ATOM 17 C5 A B1802 -54.521 -28.477 48.744 1.00 9.31 C
ATOM 18 C6 A B1802 -53.521 -29.415 48.612 1.00 9.31 C
ATOM 19 N6 A B1802 -53.096 -29.930 47.483 1.00 9.31 N
ATOM 20 N1 A B1802 -52.907 -29.846 49.701 1.00 9.31 N
ATOM 21 C2 A B1802 -53.293 -29.362 50.874 1.00 9.31 C
ATOM 22 N3 A B1802 -54.225 -28.468 51.152 1.00 9.31 N
ATOM 23 C4 A B1802 -54.790 -28.082 50.018 1.00 9.31 C
ATOM 24 P A B1803 -55.971 -21.760 51.154 1.00 0.01 P
ATOM 25 OP1 A B1803 -56.385 -20.626 51.992 1.00 0.01 O
ATOM 26 OP2 A B1803 -56.288 -21.720 49.706 1.00 0.01 O
ATOM 27 O5' A B1803 -54.412 -22.061 51.377 1.00 0.01 O
TER
Atoms:
OP1: (-47.376,-37.014,46.881)
OP2: (-46.536,-36.642,49.274)
C3': (-48.662,-32.780,47.125)
C1': (-49.972,-31.855,48.818)
C5': (-49.626,-35.136,47.501)
O6: (-47.064,-31.386,54.044)
O4': (-50.509,-33.125,48.515)
C8: (-48.658,-33.158,50.481)
C2: (-48.763,-29.121,52.058)
C6: (-47.711,-31.008,53.073)
C5: (-48.178,-31.707,51.944)
C4: (-48.888,-31.040,50.993)
P: (-47.665,-36.710,48.308)
C4': (-49.885,-33.658,47.326)
C2': (-49.132,-31.437,47.640)
O2': (-49.978,-30.816,46.685)
N1: (-48.056,-29.696,53.046)
N2: (-48.963,-27.828,52.271)
N3: (-49.221,-29.739,50.983)
N7: (-48.043,-33.028,51.600)
N9: (-49.178,-31.985,50.044)
O5': (-48.572,-35.389,48.423)
O3': (-48.248,-32.727,45.787)
OP2: (-46.536,-36.642,49.274)
C3': (-48.662,-32.780,47.125)
C1': (-49.972,-31.855,48.818)
C5': (-49.626,-35.136,47.501)
O6: (-47.064,-31.386,54.044)
O4': (-50.509,-33.125,48.515)
C8: (-48.658,-33.158,50.481)
C2: (-48.763,-29.121,52.058)
C6: (-47.711,-31.008,53.073)
C5: (-48.178,-31.707,51.944)
C4: (-48.888,-31.040,50.993)
P: (-47.665,-36.710,48.308)
C4': (-49.885,-33.658,47.326)
C2': (-49.132,-31.437,47.640)
O2': (-49.978,-30.816,46.685)
N1: (-48.056,-29.696,53.046)
N2: (-48.963,-27.828,52.271)
N3: (-49.221,-29.739,50.983)
N7: (-48.043,-33.028,51.600)
N9: (-49.178,-31.985,50.044)
O5': (-48.572,-35.389,48.423)
O3': (-48.248,-32.727,45.787)
OP1: (-61.285,-24.847,48.212)
OP2: (-59.707,-26.238,46.690)
C3': (-56.690,-24.259,51.032)
C1': (-56.326,-26.586,51.175)
C5': (-59.065,-24.607,50.125)
O4': (-57.694,-26.372,50.976)
C8: (-56.081,-27.054,48.626)
O2': (-55.606,-25.218,52.969)
C6: (-53.521,-29.415,48.612)
C5: (-54.521,-28.477,48.744)
C4: (-54.790,-28.082,50.018)
P: (-60.164,-25.838,48.062)
C4': (-58.023,-24.981,51.146)
C2': (-55.686,-25.272,51.557)
C2: (-53.293,-29.362,50.874)
N1: (-52.907,-29.846,49.701)
N3: (-54.225,-28.468,51.152)
N6: (-53.096,-29.930,47.483)
N7: (-55.333,-27.822,47.858)
N9: (-55.766,-27.162,49.952)
O5': (-58.908,-25.389,48.944)
O3': (-56.679,-23.061,51.757)
OP2: (-59.707,-26.238,46.690)
C3': (-56.690,-24.259,51.032)
C1': (-56.326,-26.586,51.175)
C5': (-59.065,-24.607,50.125)
O4': (-57.694,-26.372,50.976)
C8: (-56.081,-27.054,48.626)
O2': (-55.606,-25.218,52.969)
C6: (-53.521,-29.415,48.612)
C5: (-54.521,-28.477,48.744)
C4: (-54.790,-28.082,50.018)
P: (-60.164,-25.838,48.062)
C4': (-58.023,-24.981,51.146)
C2': (-55.686,-25.272,51.557)
C2: (-53.293,-29.362,50.874)
N1: (-52.907,-29.846,49.701)
N3: (-54.225,-28.468,51.152)
N6: (-53.096,-29.930,47.483)
N7: (-55.333,-27.822,47.858)
N9: (-55.766,-27.162,49.952)
O5': (-58.908,-25.389,48.944)
O3': (-56.679,-23.061,51.757)
Image (generated by PyMOL):