Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A11:A12
Extra
PDB:
ATOM 1 O3' U A 10 24.331 10.949 2.403 1.00 15.75 O
ATOM 2 P C A 11 25.693 11.790 2.524 1.00 17.71 P
ATOM 3 OP1 C A 11 26.754 11.081 1.752 1.00 17.41 O
ATOM 4 OP2 C A 11 25.922 12.133 3.943 1.00 15.48 O
ATOM 5 O5' C A 11 25.352 13.145 1.775 1.00 15.22 O
ATOM 6 C5' C A 11 25.046 13.137 0.391 1.00 14.95 C
ATOM 7 C4' C A 11 24.479 14.477 -0.021 1.00 17.14 C
ATOM 8 O4' C A 11 23.155 14.681 0.542 1.00 15.78 O
ATOM 9 C3' C A 11 25.258 15.671 0.494 1.00 18.08 C
ATOM 10 O3' C A 11 26.425 15.908 -0.282 1.00 19.26 O
ATOM 11 C2' C A 11 24.233 16.785 0.350 1.00 17.99 C
ATOM 12 O2' C A 11 24.097 17.196 -0.990 1.00 17.37 O
ATOM 13 C1' C A 11 22.960 16.069 0.819 1.00 17.28 C
ATOM 14 N1 C A 11 22.770 16.251 2.269 1.00 17.50 N
ATOM 15 C2 C A 11 22.207 17.449 2.714 1.00 16.12 C
ATOM 16 O2 C A 11 21.837 18.289 1.868 1.00 17.31 O
ATOM 17 N3 C A 11 22.088 17.671 4.038 1.00 17.53 N
ATOM 18 C4 C A 11 22.516 16.762 4.915 1.00 18.28 C
ATOM 19 N4 C A 11 22.401 17.049 6.222 1.00 17.84 N
ATOM 20 C5 C A 11 23.082 15.519 4.494 1.00 18.25 C
ATOM 21 C6 C A 11 23.174 15.301 3.169 1.00 17.66 C
ATOM 22 P G A 12 27.781 16.387 0.456 1.00 19.54 P
ATOM 23 OP1 G A 12 28.835 15.402 0.093 1.00 19.84 O
ATOM 24 OP2 G A 12 27.508 16.662 1.882 1.00 21.05 O
ATOM 25 O5' G A 12 28.072 17.770 -0.238 1.00 16.72 O
TER
ATOM 1 O3' C B 11 26.425 15.908 -0.282 1.00 19.26 O
ATOM 2 P G B 12 27.781 16.387 0.456 1.00 19.54 P
ATOM 3 OP1 G B 12 28.835 15.402 0.093 1.00 19.84 O
ATOM 4 OP2 G B 12 27.508 16.662 1.882 1.00 21.05 O
ATOM 5 O5' G B 12 28.072 17.770 -0.238 1.00 16.72 O
ATOM 6 C5' G B 12 28.214 17.833 -1.641 1.00 18.44 C
ATOM 7 C4' G B 12 27.858 19.222 -2.122 1.00 17.66 C
ATOM 8 O4' G B 12 26.419 19.395 -1.976 1.00 18.44 O
ATOM 9 C3' G B 12 28.429 20.382 -1.312 1.00 16.35 C
ATOM 10 O3' G B 12 29.799 20.676 -1.631 1.00 12.94 O
ATOM 11 C2' G B 12 27.483 21.494 -1.746 1.00 16.92 C
ATOM 12 O2' G B 12 27.805 21.847 -3.096 1.00 18.43 O
ATOM 13 C1' G B 12 26.130 20.767 -1.672 1.00 19.53 C
ATOM 14 N9 G B 12 25.521 20.820 -0.331 1.00 17.32 N
ATOM 15 C8 G B 12 25.623 19.857 0.640 1.00 18.25 C
ATOM 16 N7 G B 12 25.058 20.199 1.770 1.00 16.05 N
ATOM 17 C5 G B 12 24.519 21.457 1.529 1.00 15.29 C
ATOM 18 C6 G B 12 23.826 22.345 2.410 1.00 15.83 C
ATOM 19 O6 G B 12 23.506 22.160 3.589 1.00 13.24 O
ATOM 20 N1 G B 12 23.515 23.548 1.791 1.00 13.74 N
ATOM 21 C2 G B 12 23.815 23.862 0.493 1.00 15.62 C
ATOM 22 N2 G B 12 23.476 25.116 0.104 1.00 13.99 N
ATOM 23 N3 G B 12 24.422 23.032 -0.352 1.00 15.80 N
ATOM 24 C4 G B 12 24.768 21.859 0.238 1.00 17.14 C
ATOM 25 P C B 13 30.774 21.297 -0.490 1.00 15.32 P
ATOM 26 OP1 C B 13 32.151 21.289 -1.085 1.00 13.28 O
ATOM 27 OP2 C B 13 30.549 20.564 0.797 1.00 16.81 O
ATOM 28 O5' C B 13 30.216 22.799 -0.308 1.00 14.13 O
TER
ATOM 2 P C A 11 25.693 11.790 2.524 1.00 17.71 P
ATOM 3 OP1 C A 11 26.754 11.081 1.752 1.00 17.41 O
ATOM 4 OP2 C A 11 25.922 12.133 3.943 1.00 15.48 O
ATOM 5 O5' C A 11 25.352 13.145 1.775 1.00 15.22 O
ATOM 6 C5' C A 11 25.046 13.137 0.391 1.00 14.95 C
ATOM 7 C4' C A 11 24.479 14.477 -0.021 1.00 17.14 C
ATOM 8 O4' C A 11 23.155 14.681 0.542 1.00 15.78 O
ATOM 9 C3' C A 11 25.258 15.671 0.494 1.00 18.08 C
ATOM 10 O3' C A 11 26.425 15.908 -0.282 1.00 19.26 O
ATOM 11 C2' C A 11 24.233 16.785 0.350 1.00 17.99 C
ATOM 12 O2' C A 11 24.097 17.196 -0.990 1.00 17.37 O
ATOM 13 C1' C A 11 22.960 16.069 0.819 1.00 17.28 C
ATOM 14 N1 C A 11 22.770 16.251 2.269 1.00 17.50 N
ATOM 15 C2 C A 11 22.207 17.449 2.714 1.00 16.12 C
ATOM 16 O2 C A 11 21.837 18.289 1.868 1.00 17.31 O
ATOM 17 N3 C A 11 22.088 17.671 4.038 1.00 17.53 N
ATOM 18 C4 C A 11 22.516 16.762 4.915 1.00 18.28 C
ATOM 19 N4 C A 11 22.401 17.049 6.222 1.00 17.84 N
ATOM 20 C5 C A 11 23.082 15.519 4.494 1.00 18.25 C
ATOM 21 C6 C A 11 23.174 15.301 3.169 1.00 17.66 C
ATOM 22 P G A 12 27.781 16.387 0.456 1.00 19.54 P
ATOM 23 OP1 G A 12 28.835 15.402 0.093 1.00 19.84 O
ATOM 24 OP2 G A 12 27.508 16.662 1.882 1.00 21.05 O
ATOM 25 O5' G A 12 28.072 17.770 -0.238 1.00 16.72 O
TER
ATOM 1 O3' C B 11 26.425 15.908 -0.282 1.00 19.26 O
ATOM 2 P G B 12 27.781 16.387 0.456 1.00 19.54 P
ATOM 3 OP1 G B 12 28.835 15.402 0.093 1.00 19.84 O
ATOM 4 OP2 G B 12 27.508 16.662 1.882 1.00 21.05 O
ATOM 5 O5' G B 12 28.072 17.770 -0.238 1.00 16.72 O
ATOM 6 C5' G B 12 28.214 17.833 -1.641 1.00 18.44 C
ATOM 7 C4' G B 12 27.858 19.222 -2.122 1.00 17.66 C
ATOM 8 O4' G B 12 26.419 19.395 -1.976 1.00 18.44 O
ATOM 9 C3' G B 12 28.429 20.382 -1.312 1.00 16.35 C
ATOM 10 O3' G B 12 29.799 20.676 -1.631 1.00 12.94 O
ATOM 11 C2' G B 12 27.483 21.494 -1.746 1.00 16.92 C
ATOM 12 O2' G B 12 27.805 21.847 -3.096 1.00 18.43 O
ATOM 13 C1' G B 12 26.130 20.767 -1.672 1.00 19.53 C
ATOM 14 N9 G B 12 25.521 20.820 -0.331 1.00 17.32 N
ATOM 15 C8 G B 12 25.623 19.857 0.640 1.00 18.25 C
ATOM 16 N7 G B 12 25.058 20.199 1.770 1.00 16.05 N
ATOM 17 C5 G B 12 24.519 21.457 1.529 1.00 15.29 C
ATOM 18 C6 G B 12 23.826 22.345 2.410 1.00 15.83 C
ATOM 19 O6 G B 12 23.506 22.160 3.589 1.00 13.24 O
ATOM 20 N1 G B 12 23.515 23.548 1.791 1.00 13.74 N
ATOM 21 C2 G B 12 23.815 23.862 0.493 1.00 15.62 C
ATOM 22 N2 G B 12 23.476 25.116 0.104 1.00 13.99 N
ATOM 23 N3 G B 12 24.422 23.032 -0.352 1.00 15.80 N
ATOM 24 C4 G B 12 24.768 21.859 0.238 1.00 17.14 C
ATOM 25 P C B 13 30.774 21.297 -0.490 1.00 15.32 P
ATOM 26 OP1 C B 13 32.151 21.289 -1.085 1.00 13.28 O
ATOM 27 OP2 C B 13 30.549 20.564 0.797 1.00 16.81 O
ATOM 28 O5' C B 13 30.216 22.799 -0.308 1.00 14.13 O
TER
Atoms:
C2: (22.207,17.449,2.714)
OP1: (26.754,11.081,1.752)
OP2: (25.922,12.133,3.943)
C4: (22.516,16.762,4.915)
O5': (25.352,13.145,1.775)
C3': (25.258,15.671,0.494)
C1': (22.960,16.069,0.819)
O4': (23.155,14.681,0.542)
C5': (25.046,13.137,0.391)
P: (25.693,11.790,2.524)
O2: (21.837,18.289,1.868)
C4': (24.479,14.477,-0.021)
C2': (24.233,16.785,0.350)
O2': (24.097,17.196,-0.990)
N1: (22.770,16.251,2.269)
N3: (22.088,17.671,4.038)
N4: (22.401,17.049,6.222)
C6: (23.174,15.301,3.169)
C5: (23.082,15.519,4.494)
O3': (26.425,15.908,-0.282)
OP1: (26.754,11.081,1.752)
OP2: (25.922,12.133,3.943)
C4: (22.516,16.762,4.915)
O5': (25.352,13.145,1.775)
C3': (25.258,15.671,0.494)
C1': (22.960,16.069,0.819)
O4': (23.155,14.681,0.542)
C5': (25.046,13.137,0.391)
P: (25.693,11.790,2.524)
O2: (21.837,18.289,1.868)
C4': (24.479,14.477,-0.021)
C2': (24.233,16.785,0.350)
O2': (24.097,17.196,-0.990)
N1: (22.770,16.251,2.269)
N3: (22.088,17.671,4.038)
N4: (22.401,17.049,6.222)
C6: (23.174,15.301,3.169)
C5: (23.082,15.519,4.494)
O3': (26.425,15.908,-0.282)
OP1: (28.835,15.402,0.093)
OP2: (27.508,16.662,1.882)
C3': (28.429,20.382,-1.312)
C1': (26.130,20.767,-1.672)
C5': (28.214,17.833,-1.641)
O6: (23.506,22.160,3.589)
O4': (26.419,19.395,-1.976)
C8: (25.623,19.857,0.640)
C2: (23.815,23.862,0.493)
C6: (23.826,22.345,2.410)
C5: (24.519,21.457,1.529)
C4: (24.768,21.859,0.238)
P: (27.781,16.387,0.456)
C4': (27.858,19.222,-2.122)
C2': (27.483,21.494,-1.746)
O2': (27.805,21.847,-3.096)
N1: (23.515,23.548,1.791)
N2: (23.476,25.116,0.104)
N3: (24.422,23.032,-0.352)
N7: (25.058,20.199,1.770)
N9: (25.521,20.820,-0.331)
O5': (28.072,17.770,-0.238)
O3': (29.799,20.676,-1.631)
OP2: (27.508,16.662,1.882)
C3': (28.429,20.382,-1.312)
C1': (26.130,20.767,-1.672)
C5': (28.214,17.833,-1.641)
O6: (23.506,22.160,3.589)
O4': (26.419,19.395,-1.976)
C8: (25.623,19.857,0.640)
C2: (23.815,23.862,0.493)
C6: (23.826,22.345,2.410)
C5: (24.519,21.457,1.529)
C4: (24.768,21.859,0.238)
P: (27.781,16.387,0.456)
C4': (27.858,19.222,-2.122)
C2': (27.483,21.494,-1.746)
O2': (27.805,21.847,-3.096)
N1: (23.515,23.548,1.791)
N2: (23.476,25.116,0.104)
N3: (24.422,23.032,-0.352)
N7: (25.058,20.199,1.770)
N9: (25.521,20.820,-0.331)
O5': (28.072,17.770,-0.238)
O3': (29.799,20.676,-1.631)
Image (generated by PyMOL):