ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:981:982

Extra

PDB:
ATOM 1 O3' C A 80 47.726 71.808 114.616 1.00 50.51 O
ATOM 2 P U A 81 46.777 73.069 114.301 1.00 50.76 P
ATOM 3 OP1 U A 81 47.627 74.124 113.695 1.00 51.60 O
ATOM 4 OP2 U A 81 45.969 73.379 115.510 1.00 49.28 O
ATOM 5 O5' U A 81 45.756 72.544 113.201 1.00 51.00 O
ATOM 6 C5' U A 81 46.207 71.862 112.024 1.00 49.93 C
ATOM 7 C4' U A 81 45.026 71.256 111.302 1.00 52.30 C
ATOM 8 O4' U A 81 44.392 70.258 112.149 1.00 52.21 O
ATOM 9 C3' U A 81 43.900 72.221 110.952 1.00 50.79 C
ATOM 10 O3' U A 81 44.208 72.899 109.732 1.00 50.64 O
ATOM 11 C2' U A 81 42.704 71.285 110.807 1.00 50.75 C
ATOM 12 O2' U A 81 42.668 70.637 109.556 1.00 51.27 O
ATOM 13 C1' U A 81 42.999 70.234 111.884 1.00 51.88 C
ATOM 14 N1 U A 81 42.264 70.449 113.138 1.00 52.09 N
ATOM 15 C2 U A 81 40.974 69.952 113.213 1.00 52.27 C
ATOM 16 O2 U A 81 40.447 69.331 112.304 1.00 51.01 O
ATOM 17 N3 U A 81 40.321 70.208 114.390 1.00 52.85 N
ATOM 18 C4 U A 81 40.811 70.890 115.478 1.00 52.90 C
ATOM 19 O4 U A 81 40.090 71.052 116.464 1.00 53.03 O
ATOM 20 C5 U A 81 42.157 71.355 115.334 1.00 53.80 C
ATOM 21 C6 U A 81 42.820 71.124 114.197 1.00 52.40 C
ATOM 22 P G A 82 43.347 74.179 109.274 1.00 50.51 P
ATOM 23 OP1 G A 82 44.232 74.961 108.376 1.00 51.71 O
ATOM 24 OP2 G A 82 42.724 74.839 110.451 1.00 48.51 O
ATOM 25 O5' G A 82 42.189 73.566 108.374 1.00 49.19 O
TER

ATOM 1 O3' U B 81 44.208 72.899 109.732 1.00 50.64 O
ATOM 2 P G B 82 43.347 74.179 109.274 1.00 50.51 P
ATOM 3 OP1 G B 82 44.232 74.961 108.376 1.00 51.71 O
ATOM 4 OP2 G B 82 42.724 74.839 110.451 1.00 48.51 O
ATOM 5 O5' G B 82 42.189 73.566 108.374 1.00 49.19 O
ATOM 6 C5' G B 82 42.450 73.156 107.026 1.00 49.45 C
ATOM 7 C4' G B 82 41.151 72.934 106.300 1.00 50.83 C
ATOM 8 O4' G B 82 40.523 71.723 106.801 1.00 50.80 O
ATOM 9 C3' G B 82 40.104 74.025 106.492 1.00 49.64 C
ATOM 10 O3' G B 82 40.293 75.117 105.595 1.00 50.52 O
ATOM 11 C2' G B 82 38.814 73.267 106.224 1.00 49.34 C
ATOM 12 O2' G B 82 38.583 73.073 104.843 1.00 51.77 O
ATOM 13 C1' G B 82 39.121 71.922 106.895 1.00 50.44 C
ATOM 14 N9 G B 82 38.766 71.977 108.308 1.00 48.69 N
ATOM 15 C8 G B 82 39.615 72.019 109.387 1.00 47.55 C
ATOM 16 N7 G B 82 38.991 72.176 110.520 1.00 48.39 N
ATOM 17 C5 G B 82 37.648 72.218 110.169 1.00 48.43 C
ATOM 18 C6 G B 82 36.493 72.396 110.967 1.00 47.31 C
ATOM 19 O6 G B 82 36.418 72.584 112.186 1.00 49.00 O
ATOM 20 N1 G B 82 35.334 72.354 110.204 1.00 48.53 N
ATOM 21 C2 G B 82 35.285 72.168 108.847 1.00 48.51 C
ATOM 22 N2 G B 82 34.067 72.129 108.291 1.00 46.44 N
ATOM 23 N3 G B 82 36.353 72.024 108.089 1.00 50.20 N
ATOM 24 C4 G B 82 37.494 72.061 108.812 1.00 49.33 C
ATOM 25 P G B 83 39.759 76.589 105.984 1.00 48.13 P
ATOM 26 OP1 G B 83 39.954 77.428 104.770 1.00 52.37 O
ATOM 27 OP2 G B 83 40.357 77.008 107.272 1.00 50.27 O
ATOM 28 O5' G B 83 38.195 76.426 106.219 1.00 49.94 O
TER

Atoms:
C4: (40.811,70.890,115.478)
N3: (40.321,70.208,114.390)
OP1: (47.627,74.124,113.695)
OP2: (45.969,73.379,115.510)
C2: (40.974,69.952,113.213)
C1': (42.999,70.234,111.884)
C3': (43.900,72.221,110.952)
O5': (45.756,72.544,113.201)
O4': (44.392,70.258,112.149)
C5': (46.207,71.862,112.024)
P: (46.777,73.069,114.301)
C4': (45.026,71.256,111.302)
C2': (42.704,71.285,110.807)
O2': (42.668,70.637,109.556)
N1: (42.264,70.449,113.138)
O4: (40.090,71.052,116.464)
O2: (40.447,69.331,112.304)
C6: (42.820,71.124,114.197)
C5: (42.157,71.355,115.334)
O3': (44.208,72.899,109.732)
OP1: (44.232,74.961,108.376)
OP2: (42.724,74.839,110.451)
C3': (40.104,74.025,106.492)
C1': (39.121,71.922,106.895)
C5': (42.450,73.156,107.026)
O6: (36.418,72.584,112.186)
O4': (40.523,71.723,106.801)
C8: (39.615,72.019,109.387)
C2: (35.285,72.168,108.847)
C6: (36.493,72.396,110.967)
C5: (37.648,72.218,110.169)
C4: (37.494,72.061,108.812)
P: (43.347,74.179,109.274)
C4': (41.151,72.934,106.300)
C2': (38.814,73.267,106.224)
O2': (38.583,73.073,104.843)
N1: (35.334,72.354,110.204)
N2: (34.067,72.129,108.291)
N3: (36.353,72.024,108.089)
N7: (38.991,72.176,110.520)
N9: (38.766,71.977,108.308)
O5': (42.189,73.566,108.374)
O3': (40.293,75.117,105.595)
Image (generated by PyMOL):
PyMOL image
show in jmol