ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:02439:02440

Extra

PDB:
ATOM 1 O3' U A2438 80.608 135.761 141.919 1.00 37.90 O
ATOM 2 P U A2439 79.856 134.994 143.108 1.00 36.37 P
ATOM 3 OP1 U A2439 79.451 136.029 144.091 1.00 37.29 O
ATOM 4 OP2 U A2439 80.667 133.834 143.543 1.00 33.85 O
ATOM 5 O5' U A2439 78.545 134.419 142.412 1.00 36.80 O
ATOM 6 C5' U A2439 77.585 135.303 141.795 1.00 36.28 C
ATOM 7 C4' U A2439 76.429 134.507 141.248 1.00 34.06 C
ATOM 8 O4' U A2439 76.911 133.597 140.227 1.00 35.33 O
ATOM 9 C3' U A2439 75.762 133.595 142.258 1.00 35.10 C
ATOM 10 O3' U A2439 74.817 134.324 143.029 1.00 37.60 O
ATOM 11 C2' U A2439 75.109 132.546 141.370 1.00 33.58 C
ATOM 12 O2' U A2439 73.913 132.986 140.774 1.00 34.64 O
ATOM 13 C1' U A2439 76.159 132.394 140.272 1.00 34.09 C
ATOM 14 N1 U A2439 77.067 131.265 140.518 1.00 33.58 N
ATOM 15 C2 U A2439 76.609 130.008 140.163 1.00 34.25 C
ATOM 16 O2 U A2439 75.500 129.819 139.680 1.00 34.67 O
ATOM 17 N3 U A2439 77.487 128.978 140.401 1.00 35.36 N
ATOM 18 C4 U A2439 78.747 129.072 140.959 1.00 32.91 C
ATOM 19 O4 U A2439 79.425 128.054 141.079 1.00 32.47 O
ATOM 20 C5 U A2439 79.150 130.403 141.310 1.00 32.12 C
ATOM 21 C6 U A2439 78.317 131.432 141.078 1.00 33.02 C
ATOM 22 P A A2440 74.599 133.957 144.573 1.00 37.16 P
ATOM 23 OP1 A A2440 73.669 134.976 145.122 1.00 37.32 O
ATOM 24 OP2 A A2440 75.929 133.754 145.205 1.00 37.80 O
ATOM 25 O5' A A2440 73.845 132.556 144.523 1.00 37.37 O
TER

ATOM 1 O3' U B2439 74.817 134.324 143.029 1.00 37.60 O
ATOM 2 P A B2440 74.599 133.957 144.573 1.00 37.16 P
ATOM 3 OP1 A B2440 73.669 134.976 145.122 1.00 37.32 O
ATOM 4 OP2 A B2440 75.929 133.754 145.205 1.00 37.80 O
ATOM 5 O5' A B2440 73.845 132.556 144.523 1.00 37.37 O
ATOM 6 C5' A B2440 73.689 131.746 145.703 1.00 35.61 C
ATOM 7 C4' A B2440 72.719 130.625 145.423 1.00 35.89 C
ATOM 8 O4' A B2440 71.387 131.172 145.228 1.00 37.03 O
ATOM 9 C3' A B2440 73.018 129.845 144.152 1.00 36.21 C
ATOM 10 O3' A B2440 73.936 128.793 144.454 1.00 37.18 O
ATOM 11 C2' A B2440 71.641 129.311 143.763 1.00 36.92 C
ATOM 12 O2' A B2440 71.280 128.175 144.519 1.00 36.92 O
ATOM 13 C1' A B2440 70.724 130.458 144.199 1.00 36.20 C
ATOM 14 N9 A B2440 70.331 131.420 143.168 1.00 36.40 N
ATOM 15 C8 A B2440 71.031 132.526 142.752 1.00 36.38 C
ATOM 16 N7 A B2440 70.382 133.270 141.890 1.00 37.90 N
ATOM 17 C5 A B2440 69.179 132.598 141.708 1.00 36.77 C
ATOM 18 C6 A B2440 68.040 132.890 140.936 1.00 35.81 C
ATOM 19 N6 A B2440 67.906 134.003 140.210 1.00 35.90 N
ATOM 20 N1 A B2440 67.023 132.002 140.951 1.00 34.62 N
ATOM 21 C2 A B2440 67.140 130.909 141.717 1.00 34.67 C
ATOM 22 N3 A B2440 68.146 130.538 142.509 1.00 36.48 N
ATOM 23 C4 A B2440 69.148 131.437 142.460 1.00 36.84 C
ATOM 24 P A B2441 75.205 128.522 143.504 1.00 38.25 P
ATOM 25 OP1 A B2441 76.039 127.486 144.175 1.00 36.42 O
ATOM 26 OP2 A B2441 75.831 129.805 143.102 1.00 36.09 O
ATOM 27 O5' A B2441 74.557 127.863 142.208 1.00 38.09 O
TER

Atoms:
C4: (78.747,129.072,140.959)
N3: (77.487,128.978,140.401)
OP1: (79.451,136.029,144.091)
OP2: (80.667,133.834,143.543)
C2: (76.609,130.008,140.163)
C1': (76.159,132.394,140.272)
C3': (75.762,133.595,142.258)
O5': (78.545,134.419,142.412)
O4': (76.911,133.597,140.227)
C5': (77.585,135.303,141.795)
P: (79.856,134.994,143.108)
C4': (76.429,134.507,141.248)
C2': (75.109,132.546,141.370)
O2': (73.913,132.986,140.774)
N1: (77.067,131.265,140.518)
O4: (79.425,128.054,141.079)
O2: (75.500,129.819,139.680)
C6: (78.317,131.432,141.078)
C5: (79.150,130.403,141.310)
O3': (74.817,134.324,143.029)
OP1: (73.669,134.976,145.122)
OP2: (75.929,133.754,145.205)
C3': (73.018,129.845,144.152)
C1': (70.724,130.458,144.199)
C5': (73.689,131.746,145.703)
O4': (71.387,131.172,145.228)
C8: (71.031,132.526,142.752)
O2': (71.280,128.175,144.519)
C6: (68.040,132.890,140.936)
C5: (69.179,132.598,141.708)
C4: (69.148,131.437,142.460)
P: (74.599,133.957,144.573)
C4': (72.719,130.625,145.423)
C2': (71.641,129.311,143.763)
C2: (67.140,130.909,141.717)
N1: (67.023,132.002,140.951)
N3: (68.146,130.538,142.509)
N6: (67.906,134.003,140.210)
N7: (70.382,133.270,141.890)
N9: (70.331,131.420,143.168)
O5': (73.845,132.556,144.523)
O3': (73.936,128.793,144.454)
Image (generated by PyMOL):
PyMOL image
show in jmol