Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0283:0344
Extra
PDB:
ATOM 1 O3' C A 282 40.788 123.004 6.163 1.00 63.94 O
ATOM 2 P C A 283 40.097 123.530 7.515 1.00 65.37 P
ATOM 3 OP1 C A 283 38.692 123.893 7.184 1.00 65.79 O
ATOM 4 OP2 C A 283 40.991 124.550 8.124 1.00 65.30 O
ATOM 5 O5' C A 283 40.075 122.242 8.455 1.00 65.69 O
ATOM 6 C5' C A 283 39.300 121.081 8.101 1.00 63.94 C
ATOM 7 C4' C A 283 39.707 119.897 8.946 1.00 63.84 C
ATOM 8 O4' C A 283 41.109 119.598 8.710 1.00 64.54 O
ATOM 9 C3' C A 283 39.624 120.079 10.454 1.00 64.04 C
ATOM 10 O3' C A 283 38.301 119.893 10.957 1.00 63.62 O
ATOM 11 C2' C A 283 40.584 119.004 10.947 1.00 64.12 C
ATOM 12 O2' C A 283 40.024 117.710 10.899 1.00 64.37 O
ATOM 13 C1' C A 283 41.700 119.101 9.904 1.00 64.73 C
ATOM 14 N1 C A 283 42.787 120.016 10.324 1.00 65.64 N
ATOM 15 C2 C A 283 43.808 119.522 11.165 1.00 65.66 C
ATOM 16 O2 C A 283 43.783 118.326 11.516 1.00 65.57 O
ATOM 17 N3 C A 283 44.790 120.362 11.573 1.00 65.33 N
ATOM 18 C4 C A 283 44.785 121.639 11.179 1.00 65.09 C
ATOM 19 N4 C A 283 45.769 122.431 11.613 1.00 64.18 N
ATOM 20 C5 C A 283 43.771 122.163 10.322 1.00 64.76 C
ATOM 21 C6 C A 283 42.804 121.326 9.921 1.00 64.98 C
ATOM 22 P G A 284 37.825 120.689 12.274 1.00 62.53 P
ATOM 23 OP1 G A 284 36.476 120.187 12.641 1.00 63.17 O
ATOM 24 OP2 G A 284 38.025 122.140 12.043 1.00 62.85 O
ATOM 25 O5' G A 284 38.847 120.221 13.405 1.00 61.95 O
TER
ATOM 1 O3' C B 343 53.427 125.669 17.876 1.00 47.87 O
ATOM 2 P C B 344 54.144 124.956 16.626 1.00 47.54 P
ATOM 3 OP1 C B 344 55.450 124.414 17.086 1.00 47.75 O
ATOM 4 OP2 C B 344 54.107 125.906 15.494 1.00 48.71 O
ATOM 5 O5' C B 344 53.189 123.731 16.266 1.00 48.24 O
ATOM 6 C5' C B 344 53.056 122.602 17.157 1.00 48.05 C
ATOM 7 C4' C B 344 52.033 121.625 16.620 1.00 47.98 C
ATOM 8 O4' C B 344 50.767 122.315 16.446 1.00 48.76 O
ATOM 9 C3' C B 344 52.328 121.035 15.250 1.00 48.62 C
ATOM 10 O3' C B 344 53.205 119.913 15.337 1.00 48.26 O
ATOM 11 C2' C B 344 50.938 120.646 14.761 1.00 49.75 C
ATOM 12 O2' C B 344 50.480 119.432 15.321 1.00 50.18 O
ATOM 13 C1' C B 344 50.092 121.797 15.312 1.00 50.11 C
ATOM 14 N1 C B 344 49.873 122.899 14.355 1.00 51.73 N
ATOM 15 C2 C B 344 48.746 122.861 13.516 1.00 52.45 C
ATOM 16 O2 C B 344 47.975 121.889 13.577 1.00 53.18 O
ATOM 17 N3 C B 344 48.528 123.884 12.658 1.00 53.15 N
ATOM 18 C4 C B 344 49.383 124.909 12.610 1.00 53.43 C
ATOM 19 N4 C B 344 49.122 125.902 11.758 1.00 53.40 N
ATOM 20 C5 C B 344 50.543 124.965 13.436 1.00 53.87 C
ATOM 21 C6 C B 344 50.747 123.950 14.285 1.00 53.58 C
ATOM 22 P A B 345 54.193 119.566 14.113 1.00 51.46 P
ATOM 23 OP1 A B 345 53.370 119.332 12.896 1.00 50.26 O
ATOM 24 OP2 A B 345 55.156 118.523 14.563 1.00 50.29 O
ATOM 25 O5' A B 345 55.007 120.911 13.879 1.00 51.44 O
TER
ATOM 2 P C A 283 40.097 123.530 7.515 1.00 65.37 P
ATOM 3 OP1 C A 283 38.692 123.893 7.184 1.00 65.79 O
ATOM 4 OP2 C A 283 40.991 124.550 8.124 1.00 65.30 O
ATOM 5 O5' C A 283 40.075 122.242 8.455 1.00 65.69 O
ATOM 6 C5' C A 283 39.300 121.081 8.101 1.00 63.94 C
ATOM 7 C4' C A 283 39.707 119.897 8.946 1.00 63.84 C
ATOM 8 O4' C A 283 41.109 119.598 8.710 1.00 64.54 O
ATOM 9 C3' C A 283 39.624 120.079 10.454 1.00 64.04 C
ATOM 10 O3' C A 283 38.301 119.893 10.957 1.00 63.62 O
ATOM 11 C2' C A 283 40.584 119.004 10.947 1.00 64.12 C
ATOM 12 O2' C A 283 40.024 117.710 10.899 1.00 64.37 O
ATOM 13 C1' C A 283 41.700 119.101 9.904 1.00 64.73 C
ATOM 14 N1 C A 283 42.787 120.016 10.324 1.00 65.64 N
ATOM 15 C2 C A 283 43.808 119.522 11.165 1.00 65.66 C
ATOM 16 O2 C A 283 43.783 118.326 11.516 1.00 65.57 O
ATOM 17 N3 C A 283 44.790 120.362 11.573 1.00 65.33 N
ATOM 18 C4 C A 283 44.785 121.639 11.179 1.00 65.09 C
ATOM 19 N4 C A 283 45.769 122.431 11.613 1.00 64.18 N
ATOM 20 C5 C A 283 43.771 122.163 10.322 1.00 64.76 C
ATOM 21 C6 C A 283 42.804 121.326 9.921 1.00 64.98 C
ATOM 22 P G A 284 37.825 120.689 12.274 1.00 62.53 P
ATOM 23 OP1 G A 284 36.476 120.187 12.641 1.00 63.17 O
ATOM 24 OP2 G A 284 38.025 122.140 12.043 1.00 62.85 O
ATOM 25 O5' G A 284 38.847 120.221 13.405 1.00 61.95 O
TER
ATOM 1 O3' C B 343 53.427 125.669 17.876 1.00 47.87 O
ATOM 2 P C B 344 54.144 124.956 16.626 1.00 47.54 P
ATOM 3 OP1 C B 344 55.450 124.414 17.086 1.00 47.75 O
ATOM 4 OP2 C B 344 54.107 125.906 15.494 1.00 48.71 O
ATOM 5 O5' C B 344 53.189 123.731 16.266 1.00 48.24 O
ATOM 6 C5' C B 344 53.056 122.602 17.157 1.00 48.05 C
ATOM 7 C4' C B 344 52.033 121.625 16.620 1.00 47.98 C
ATOM 8 O4' C B 344 50.767 122.315 16.446 1.00 48.76 O
ATOM 9 C3' C B 344 52.328 121.035 15.250 1.00 48.62 C
ATOM 10 O3' C B 344 53.205 119.913 15.337 1.00 48.26 O
ATOM 11 C2' C B 344 50.938 120.646 14.761 1.00 49.75 C
ATOM 12 O2' C B 344 50.480 119.432 15.321 1.00 50.18 O
ATOM 13 C1' C B 344 50.092 121.797 15.312 1.00 50.11 C
ATOM 14 N1 C B 344 49.873 122.899 14.355 1.00 51.73 N
ATOM 15 C2 C B 344 48.746 122.861 13.516 1.00 52.45 C
ATOM 16 O2 C B 344 47.975 121.889 13.577 1.00 53.18 O
ATOM 17 N3 C B 344 48.528 123.884 12.658 1.00 53.15 N
ATOM 18 C4 C B 344 49.383 124.909 12.610 1.00 53.43 C
ATOM 19 N4 C B 344 49.122 125.902 11.758 1.00 53.40 N
ATOM 20 C5 C B 344 50.543 124.965 13.436 1.00 53.87 C
ATOM 21 C6 C B 344 50.747 123.950 14.285 1.00 53.58 C
ATOM 22 P A B 345 54.193 119.566 14.113 1.00 51.46 P
ATOM 23 OP1 A B 345 53.370 119.332 12.896 1.00 50.26 O
ATOM 24 OP2 A B 345 55.156 118.523 14.563 1.00 50.29 O
ATOM 25 O5' A B 345 55.007 120.911 13.879 1.00 51.44 O
TER
Atoms:
C2: (43.808,119.522,11.165)
OP1: (38.692,123.893,7.184)
OP2: (40.991,124.550,8.124)
C4: (44.785,121.639,11.179)
O5': (40.075,122.242,8.455)
C3': (39.624,120.079,10.454)
C1': (41.700,119.101,9.904)
O4': (41.109,119.598,8.710)
C5': (39.300,121.081,8.101)
P: (40.097,123.530,7.515)
O2: (43.783,118.326,11.516)
C4': (39.707,119.897,8.946)
C2': (40.584,119.004,10.947)
O2': (40.024,117.710,10.899)
N1: (42.787,120.016,10.324)
N3: (44.790,120.362,11.573)
N4: (45.769,122.431,11.613)
C6: (42.804,121.326,9.921)
C5: (43.771,122.163,10.322)
O3': (38.301,119.893,10.957)
OP1: (38.692,123.893,7.184)
OP2: (40.991,124.550,8.124)
C4: (44.785,121.639,11.179)
O5': (40.075,122.242,8.455)
C3': (39.624,120.079,10.454)
C1': (41.700,119.101,9.904)
O4': (41.109,119.598,8.710)
C5': (39.300,121.081,8.101)
P: (40.097,123.530,7.515)
O2: (43.783,118.326,11.516)
C4': (39.707,119.897,8.946)
C2': (40.584,119.004,10.947)
O2': (40.024,117.710,10.899)
N1: (42.787,120.016,10.324)
N3: (44.790,120.362,11.573)
N4: (45.769,122.431,11.613)
C6: (42.804,121.326,9.921)
C5: (43.771,122.163,10.322)
O3': (38.301,119.893,10.957)
C2: (48.746,122.861,13.516)
OP1: (55.450,124.414,17.086)
OP2: (54.107,125.906,15.494)
C4: (49.383,124.909,12.610)
O5': (53.189,123.731,16.266)
C3': (52.328,121.035,15.250)
C1': (50.092,121.797,15.312)
O4': (50.767,122.315,16.446)
C5': (53.056,122.602,17.157)
P: (54.144,124.956,16.626)
O2: (47.975,121.889,13.577)
C4': (52.033,121.625,16.620)
C2': (50.938,120.646,14.761)
O2': (50.480,119.432,15.321)
N1: (49.873,122.899,14.355)
N3: (48.528,123.884,12.658)
N4: (49.122,125.902,11.758)
C6: (50.747,123.950,14.285)
C5: (50.543,124.965,13.436)
O3': (53.205,119.913,15.337)
OP1: (55.450,124.414,17.086)
OP2: (54.107,125.906,15.494)
C4: (49.383,124.909,12.610)
O5': (53.189,123.731,16.266)
C3': (52.328,121.035,15.250)
C1': (50.092,121.797,15.312)
O4': (50.767,122.315,16.446)
C5': (53.056,122.602,17.157)
P: (54.144,124.956,16.626)
O2: (47.975,121.889,13.577)
C4': (52.033,121.625,16.620)
C2': (50.938,120.646,14.761)
O2': (50.480,119.432,15.321)
N1: (49.873,122.899,14.355)
N3: (48.528,123.884,12.658)
N4: (49.122,125.902,11.758)
C6: (50.747,123.950,14.285)
C5: (50.543,124.965,13.436)
O3': (53.205,119.913,15.337)
Image (generated by PyMOL):