Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B48:B21
Extra
PDB:
ATOM 1 O3' U A 47 -6.733 43.315 95.782 1.00 38.98 O
ATOM 2 P C A 48 -7.139 41.770 95.722 1.00 45.31 P
ATOM 3 OP1 C A 48 -8.612 41.788 95.560 1.00 47.48 O
ATOM 4 OP2 C A 48 -6.557 40.995 96.847 1.00 54.98 O
ATOM 5 O5' C A 48 -6.423 41.236 94.400 1.00 41.48 O
ATOM 6 C5' C A 48 -7.055 41.162 93.155 1.00 30.39 C
ATOM 7 C4' C A 48 -7.008 39.705 92.668 1.00 26.52 C
ATOM 8 O4' C A 48 -7.703 38.881 93.604 1.00 32.52 O
ATOM 9 C3' C A 48 -7.691 39.610 91.339 1.00 34.45 C
ATOM 10 O3' C A 48 -6.820 38.764 90.539 1.00 26.94 O
ATOM 11 C2' C A 48 -8.992 38.880 91.657 1.00 24.46 C
ATOM 12 O2' C A 48 -9.456 38.126 90.606 1.00 28.28 O
ATOM 13 C1' C A 48 -8.625 38.077 92.917 1.00 32.74 C
ATOM 14 N1 C A 48 -9.756 37.838 93.823 1.00 30.46 N
ATOM 15 C2 C A 48 -10.307 36.543 93.897 1.00 34.44 C
ATOM 16 O2 C A 48 -9.801 35.626 93.210 1.00 34.79 O
ATOM 17 N3 C A 48 -11.383 36.314 94.715 1.00 29.69 N
ATOM 18 C4 C A 48 -11.905 37.319 95.448 1.00 36.58 C
ATOM 19 N4 C A 48 -12.938 37.017 96.265 1.00 33.20 N
ATOM 20 C5 C A 48 -11.368 38.655 95.397 1.00 27.33 C
ATOM 21 C6 C A 48 -10.290 38.872 94.581 1.00 29.44 C
ATOM 22 P G A 49 -6.601 39.047 89.023 1.00 33.53 P
ATOM 23 OP1 G A 49 -7.771 39.474 88.213 1.00 32.34 O
ATOM 24 OP2 G A 49 -5.785 37.905 88.548 1.00 35.35 O
ATOM 25 O5' G A 49 -5.656 40.353 89.021 1.00 37.95 O
TER
ATOM 1 O3' U B 20 -16.926 36.907 98.118 1.00 98.61 O
ATOM 2 P A B 21 -16.320 37.195 99.582 1.00 90.13 P
ATOM 3 OP1 A B 21 -17.467 37.244 100.548 1.00 98.90 O
ATOM 4 OP2 A B 21 -15.348 38.325 99.515 1.00 90.30 O
ATOM 5 O5' A B 21 -15.395 35.936 99.823 1.00 89.86 O
ATOM 6 C5' A B 21 -14.435 35.634 98.839 1.00 90.58 C
ATOM 7 C4' A B 21 -14.030 34.185 98.876 1.00 86.74 C
ATOM 8 O4' A B 21 -13.170 33.971 97.725 1.00 85.38 O
ATOM 9 C3' A B 21 -13.188 33.820 100.095 1.00 85.75 C
ATOM 10 O3' A B 21 -14.028 33.173 101.050 1.00 90.47 O
ATOM 11 C2' A B 21 -12.108 32.943 99.481 1.00 81.90 C
ATOM 12 O2' A B 21 -12.602 31.682 99.071 1.00 84.90 O
ATOM 13 C1' A B 21 -11.866 33.702 98.181 1.00 74.31 C
ATOM 14 N9 A B 21 -11.139 34.982 98.274 1.00 54.86 N
ATOM 15 C8 A B 21 -11.322 36.132 99.020 1.00 48.01 C
ATOM 16 N7 A B 21 -10.461 37.079 98.731 1.00 42.87 N
ATOM 17 C5 A B 21 -9.659 36.505 97.750 1.00 38.76 C
ATOM 18 C6 A B 21 -8.562 36.964 96.989 1.00 42.98 C
ATOM 19 N6 A B 21 -8.009 38.180 97.057 1.00 36.32 N
ATOM 20 N1 A B 21 -8.023 36.096 96.113 1.00 38.35 N
ATOM 21 C2 A B 21 -8.525 34.891 96.022 1.00 35.00 C
ATOM 22 N3 A B 21 -9.510 34.358 96.652 1.00 40.12 N
ATOM 23 C4 A B 21 -10.051 35.217 97.500 1.00 39.50 C
ATOM 24 P G B 22 -13.408 32.556 102.399 1.00 83.62 P
ATOM 25 OP1 G B 22 -14.508 32.424 103.373 1.00 91.28 O
ATOM 26 OP2 G B 22 -12.193 33.314 102.793 1.00 93.75 O
ATOM 27 O5' G B 22 -12.977 31.104 101.925 1.00 78.84 O
TER
ATOM 2 P C A 48 -7.139 41.770 95.722 1.00 45.31 P
ATOM 3 OP1 C A 48 -8.612 41.788 95.560 1.00 47.48 O
ATOM 4 OP2 C A 48 -6.557 40.995 96.847 1.00 54.98 O
ATOM 5 O5' C A 48 -6.423 41.236 94.400 1.00 41.48 O
ATOM 6 C5' C A 48 -7.055 41.162 93.155 1.00 30.39 C
ATOM 7 C4' C A 48 -7.008 39.705 92.668 1.00 26.52 C
ATOM 8 O4' C A 48 -7.703 38.881 93.604 1.00 32.52 O
ATOM 9 C3' C A 48 -7.691 39.610 91.339 1.00 34.45 C
ATOM 10 O3' C A 48 -6.820 38.764 90.539 1.00 26.94 O
ATOM 11 C2' C A 48 -8.992 38.880 91.657 1.00 24.46 C
ATOM 12 O2' C A 48 -9.456 38.126 90.606 1.00 28.28 O
ATOM 13 C1' C A 48 -8.625 38.077 92.917 1.00 32.74 C
ATOM 14 N1 C A 48 -9.756 37.838 93.823 1.00 30.46 N
ATOM 15 C2 C A 48 -10.307 36.543 93.897 1.00 34.44 C
ATOM 16 O2 C A 48 -9.801 35.626 93.210 1.00 34.79 O
ATOM 17 N3 C A 48 -11.383 36.314 94.715 1.00 29.69 N
ATOM 18 C4 C A 48 -11.905 37.319 95.448 1.00 36.58 C
ATOM 19 N4 C A 48 -12.938 37.017 96.265 1.00 33.20 N
ATOM 20 C5 C A 48 -11.368 38.655 95.397 1.00 27.33 C
ATOM 21 C6 C A 48 -10.290 38.872 94.581 1.00 29.44 C
ATOM 22 P G A 49 -6.601 39.047 89.023 1.00 33.53 P
ATOM 23 OP1 G A 49 -7.771 39.474 88.213 1.00 32.34 O
ATOM 24 OP2 G A 49 -5.785 37.905 88.548 1.00 35.35 O
ATOM 25 O5' G A 49 -5.656 40.353 89.021 1.00 37.95 O
TER
ATOM 1 O3' U B 20 -16.926 36.907 98.118 1.00 98.61 O
ATOM 2 P A B 21 -16.320 37.195 99.582 1.00 90.13 P
ATOM 3 OP1 A B 21 -17.467 37.244 100.548 1.00 98.90 O
ATOM 4 OP2 A B 21 -15.348 38.325 99.515 1.00 90.30 O
ATOM 5 O5' A B 21 -15.395 35.936 99.823 1.00 89.86 O
ATOM 6 C5' A B 21 -14.435 35.634 98.839 1.00 90.58 C
ATOM 7 C4' A B 21 -14.030 34.185 98.876 1.00 86.74 C
ATOM 8 O4' A B 21 -13.170 33.971 97.725 1.00 85.38 O
ATOM 9 C3' A B 21 -13.188 33.820 100.095 1.00 85.75 C
ATOM 10 O3' A B 21 -14.028 33.173 101.050 1.00 90.47 O
ATOM 11 C2' A B 21 -12.108 32.943 99.481 1.00 81.90 C
ATOM 12 O2' A B 21 -12.602 31.682 99.071 1.00 84.90 O
ATOM 13 C1' A B 21 -11.866 33.702 98.181 1.00 74.31 C
ATOM 14 N9 A B 21 -11.139 34.982 98.274 1.00 54.86 N
ATOM 15 C8 A B 21 -11.322 36.132 99.020 1.00 48.01 C
ATOM 16 N7 A B 21 -10.461 37.079 98.731 1.00 42.87 N
ATOM 17 C5 A B 21 -9.659 36.505 97.750 1.00 38.76 C
ATOM 18 C6 A B 21 -8.562 36.964 96.989 1.00 42.98 C
ATOM 19 N6 A B 21 -8.009 38.180 97.057 1.00 36.32 N
ATOM 20 N1 A B 21 -8.023 36.096 96.113 1.00 38.35 N
ATOM 21 C2 A B 21 -8.525 34.891 96.022 1.00 35.00 C
ATOM 22 N3 A B 21 -9.510 34.358 96.652 1.00 40.12 N
ATOM 23 C4 A B 21 -10.051 35.217 97.500 1.00 39.50 C
ATOM 24 P G B 22 -13.408 32.556 102.399 1.00 83.62 P
ATOM 25 OP1 G B 22 -14.508 32.424 103.373 1.00 91.28 O
ATOM 26 OP2 G B 22 -12.193 33.314 102.793 1.00 93.75 O
ATOM 27 O5' G B 22 -12.977 31.104 101.925 1.00 78.84 O
TER
Atoms:
C2: (-10.307,36.543,93.897)
OP1: (-8.612,41.788,95.560)
OP2: (-6.557,40.995,96.847)
C4: (-11.905,37.319,95.448)
O5': (-6.423,41.236,94.400)
C3': (-7.691,39.610,91.339)
C1': (-8.625,38.077,92.917)
O4': (-7.703,38.881,93.604)
C5': (-7.055,41.162,93.155)
P: (-7.139,41.770,95.722)
O2: (-9.801,35.626,93.210)
C4': (-7.008,39.705,92.668)
C2': (-8.992,38.880,91.657)
O2': (-9.456,38.126,90.606)
N1: (-9.756,37.838,93.823)
N3: (-11.383,36.314,94.715)
N4: (-12.938,37.017,96.265)
C6: (-10.290,38.872,94.581)
C5: (-11.368,38.655,95.397)
O3': (-6.820,38.764,90.539)
OP1: (-8.612,41.788,95.560)
OP2: (-6.557,40.995,96.847)
C4: (-11.905,37.319,95.448)
O5': (-6.423,41.236,94.400)
C3': (-7.691,39.610,91.339)
C1': (-8.625,38.077,92.917)
O4': (-7.703,38.881,93.604)
C5': (-7.055,41.162,93.155)
P: (-7.139,41.770,95.722)
O2: (-9.801,35.626,93.210)
C4': (-7.008,39.705,92.668)
C2': (-8.992,38.880,91.657)
O2': (-9.456,38.126,90.606)
N1: (-9.756,37.838,93.823)
N3: (-11.383,36.314,94.715)
N4: (-12.938,37.017,96.265)
C6: (-10.290,38.872,94.581)
C5: (-11.368,38.655,95.397)
O3': (-6.820,38.764,90.539)
OP1: (-17.467,37.244,100.548)
OP2: (-15.348,38.325,99.515)
C3': (-13.188,33.820,100.095)
C1': (-11.866,33.702,98.181)
C5': (-14.435,35.634,98.839)
O4': (-13.170,33.971,97.725)
C8: (-11.322,36.132,99.020)
O2': (-12.602,31.682,99.071)
C6: (-8.562,36.964,96.989)
C5: (-9.659,36.505,97.750)
C4: (-10.051,35.217,97.500)
P: (-16.320,37.195,99.582)
C4': (-14.030,34.185,98.876)
C2': (-12.108,32.943,99.481)
C2: (-8.525,34.891,96.022)
N1: (-8.023,36.096,96.113)
N3: (-9.510,34.358,96.652)
N6: (-8.009,38.180,97.057)
N7: (-10.461,37.079,98.731)
N9: (-11.139,34.982,98.274)
O5': (-15.395,35.936,99.823)
O3': (-14.028,33.173,101.050)
OP2: (-15.348,38.325,99.515)
C3': (-13.188,33.820,100.095)
C1': (-11.866,33.702,98.181)
C5': (-14.435,35.634,98.839)
O4': (-13.170,33.971,97.725)
C8: (-11.322,36.132,99.020)
O2': (-12.602,31.682,99.071)
C6: (-8.562,36.964,96.989)
C5: (-9.659,36.505,97.750)
C4: (-10.051,35.217,97.500)
P: (-16.320,37.195,99.582)
C4': (-14.030,34.185,98.876)
C2': (-12.108,32.943,99.481)
C2: (-8.525,34.891,96.022)
N1: (-8.023,36.096,96.113)
N3: (-9.510,34.358,96.652)
N6: (-8.009,38.180,97.057)
N7: (-10.461,37.079,98.731)
N9: (-11.139,34.982,98.274)
O5': (-15.395,35.936,99.823)
O3': (-14.028,33.173,101.050)
Image (generated by PyMOL):